RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 SPG7Q9UQ90 795 aa11.8□□□□□ -0.52
CSMD2-203ENST00000373377 VPS37CA5D8V6 355 aaPredicted RBP11.79□□□□□ -0.52
CSMD2-203ENST00000373377 NUTM2GQ5VZR2 741 aa11.79□□□□□ -0.52
CSMD2-203ENST00000373377 SRCIN1Q9C0H9 1055 aa11.79□□□□□ -0.52
CSMD2-203ENST00000373377 SPDYE4A6NLX3 237 aa11.79□□□□□ -0.52
CSMD2-203ENST00000373377 DYNC1I1O14576 645 aa11.79□□□□□ -0.52
CSMD2-203ENST00000373377 IGSF3O75054 1194 aa11.79□□□□□ -0.52
CSMD2-203ENST00000373377 CWC27Q6UX04 472 aaKnown RBP11.79□□□□□ -0.52
CSMD2-203ENST00000373377 SURF6O75683 361 aaKnown RBP11.79□□□□□ -0.52
CSMD2-203ENST00000373377 PHF14O94880 888 aa11.79□□□□□ -0.52
CSMD2-203ENST00000373377 EIF2S2P20042 333 aaKnown RBP11.79□□□□□ -0.52
CSMD2-203ENST00000373377 OS9Q13438 667 aaPredicted RBP11.79□□□□□ -0.52
CSMD2-203ENST00000373377 CHL1O00533 1208 aa11.78□□□□□ -0.52
CSMD2-203ENST00000373377 HAP1P54257 671 aaPredicted RBP11.78□□□□□ -0.52
CSMD2-203ENST00000373377 NOLC1Q14978 699 aaKnown RBP eCLIP11.78□□□□□ -0.52
CSMD2-203ENST00000373377 MAP7D2Q96T17 732 aa11.78□□□□□ -0.52
CSMD2-203ENST00000373377 CAMK4Q16566 473 aa11.78□□□□□ -0.52
CSMD2-203ENST00000373377 FERMT3Q86UX7 667 aa11.78□□□□□ -0.52
CSMD2-203ENST00000373377 WDR33Q9C0J8 1336 aaKnown RBP11.77□□□□□ -0.53
CSMD2-203ENST00000373377 CCDC83Q8IWF9 413 aa11.77□□□□□ -0.53
CSMD2-203ENST00000373377 MCM2P49736 904 aa11.77□□□□□ -0.53
CSMD2-203ENST00000373377 SMC3Q9UQE7 1217 aa11.77□□□□□ -0.53
CSMD2-203ENST00000373377 CCDC61Q9Y6R9 512 aa11.77□□□□□ -0.53
CSMD2-203ENST00000373377 PTPRCP08575 1304 aa11.76□□□□□ -0.53
CSMD2-203ENST00000373377 MTHFSDQ2M296 383 aaKnown RBP11.76□□□□□ -0.53
CSMD2-203ENST00000373377 DRC7Q8IY82 874 aa11.76□□□□□ -0.53
CSMD2-203ENST00000373377 LRRC37A3O60309 1634 aa11.76□□□□□ -0.53
CSMD2-203ENST00000373377 CCT4P50991 539 aaKnown RBP11.76□□□□□ -0.53
CSMD2-203ENST00000373377 FLIIQ13045 1269 aa11.76□□□□□ -0.53
CSMD2-203ENST00000373377 FAM173BQ6P4H8 233 aa11.76□□□□□ -0.53
CSMD2-203ENST00000373377 C14orf37Q86TY3 774 aa11.76□□□□□ -0.53
CSMD2-203ENST00000373377 USP6P35125 1406 aa11.75□□□□□ -0.53
CSMD2-203ENST00000373377 MCM5P33992 734 aa11.75□□□□□ -0.53
CSMD2-203ENST00000373377 KCNJ4P48050 445 aa11.75□□□□□ -0.53
CSMD2-203ENST00000373377 DNM1Q05193 864 aaKnown RBP11.75□□□□□ -0.53
CSMD2-203ENST00000373377 CASTP20810 708 aaKnown RBP11.75□□□□□ -0.53
CSMD2-203ENST00000373377 AK2P54819 239 aa11.75□□□□□ -0.53
CSMD2-203ENST00000373377 PPP4R3BQ5MIZ7 849 aa11.75□□□□□ -0.53
CSMD2-203ENST00000373377 TCEANC2Q96MN5 208 aa11.75□□□□□ -0.53
CSMD2-203ENST00000373377 A0A0U1RQG5 324 aaPredicted RBP11.75□□□□□ -0.53
CSMD2-203ENST00000373377 ANXA1P04083 346 aa11.75□□□□□ -0.53
CSMD2-203ENST00000373377 UBTFL1P0CB47 393 aaPredicted RBP11.75□□□□□ -0.53
CSMD2-203ENST00000373377 TERF1P54274 439 aa11.75□□□□□ -0.53
CSMD2-203ENST00000373377 CCDC183Q5T5S1 534 aa11.75□□□□□ -0.53
CSMD2-203ENST00000373377 NECAB1Q8N987 351 aa11.75□□□□□ -0.53
CSMD2-203ENST00000373377 USP31Q70CQ4 1352 aa11.75□□□□□ -0.53
CSMD2-203ENST00000373377 SYT1P21579 422 aa11.74□□□□□ -0.53
CSMD2-203ENST00000373377 AMPHP49418 695 aa11.74□□□□□ -0.53
CSMD2-203ENST00000373377 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
CSMD2-203ENST00000373377 STX6O43752 255 aa11.74□□□□□ -0.53
CSMD2-203ENST00000373377 PHRF1Q9P1Y6 1649 aaKnown RBP11.74□□□□□ -0.53
CSMD2-203ENST00000373377 CUL4AQ13619 759 aa11.73□□□□□ -0.53
CSMD2-203ENST00000373377 RGS12O14924 1447 aa11.73□□□□□ -0.53
CSMD2-203ENST00000373377 SRGAP3O43295 1099 aa11.73□□□□□ -0.53
CSMD2-203ENST00000373377 CKAP2LQ8IYA6 745 aa11.73□□□□□ -0.53
CSMD2-203ENST00000373377 KIF3AQ9Y496 699 aa11.73□□□□□ -0.53
CSMD2-203ENST00000373377 LARGE1O95461 756 aa11.73□□□□□ -0.53
CSMD2-203ENST00000373377 GNAI3P08754 354 aa11.73□□□□□ -0.53
CSMD2-203ENST00000373377 HDGFP51858 240 aaKnown RBP11.73□□□□□ -0.53
CSMD2-203ENST00000373377 MYRIPQ8NFW9 859 aa11.73□□□□□ -0.53
CSMD2-203ENST00000373377 PHAXQ9H814 394 aaKnown RBP11.73□□□□□ -0.53
CSMD2-203ENST00000373377 TCHHQ07283 1943 aa11.72□□□□□ -0.53
CSMD2-203ENST00000373377 NWD1Q149M9 1564 aa11.72□□□□□ -0.53
CSMD2-203ENST00000373377 ZSCAN22P10073 491 aaPredicted RBP11.72□□□□□ -0.53
CSMD2-203ENST00000373377 CHAF1AQ13111 956 aaPredicted RBP11.72□□□□□ -0.53
CSMD2-203ENST00000373377 PPP1R42Q7Z4L9 355 aa11.72□□□□□ -0.53
CSMD2-203ENST00000373377 PIBF1Q8WXW3 757 aa11.72□□□□□ -0.53
CSMD2-203ENST00000373377 JAKMIP1Q96N16 626 aaKnown RBP11.72□□□□□ -0.53
CSMD2-203ENST00000373377 MAP3K19Q56UN5 1328 aa11.72□□□□□ -0.53
CSMD2-203ENST00000373377 PLEKHG3A1L390 1219 aa11.72□□□□□ -0.53
CSMD2-203ENST00000373377 PRPF40BQ6NWY9 871 aaKnown RBP11.72□□□□□ -0.53
CSMD2-203ENST00000373377 PRDM4Q9UKN5 801 aa11.72□□□□□ -0.53
CSMD2-203ENST00000373377 PYCARDQ9ULZ3 195 aa11.72□□□□□ -0.53
CSMD2-203ENST00000373377 GJB2P29033 226 aa11.71□□□□□ -0.53
CSMD2-203ENST00000373377 CEBPAP49715 358 aaPredicted RBP11.71□□□□□ -0.53
CSMD2-203ENST00000373377 FOSBP53539 338 aa11.71□□□□□ -0.53
CSMD2-203ENST00000373377 ATP8B2P98198 1209 aa11.71□□□□□ -0.53
CSMD2-203ENST00000373377 STK3Q13188 491 aa11.71□□□□□ -0.53
CSMD2-203ENST00000373377 USHBP1Q8N6Y0 703 aa11.71□□□□□ -0.53
CSMD2-203ENST00000373377 ZNF592Q92610 1267 aa11.71□□□□□ -0.53
CSMD2-203ENST00000373377 INTS4Q96HW7 963 aaKnown RBP11.71□□□□□ -0.53
CSMD2-203ENST00000373377 DIAPH3Q9NSV4 1193 aa11.71□□□□□ -0.53
CSMD2-203ENST00000373377 GOLGA6L4A6NEF3 574 aa11.71□□□□□ -0.53
CSMD2-203ENST00000373377 CCDC94Q9BW85 323 aaPredicted RBP11.71□□□□□ -0.53
CSMD2-203ENST00000373377 OSBPL3Q9H4L5 887 aa11.71□□□□□ -0.53
CSMD2-203ENST00000373377 TFIP11Q9UBB9 837 aaKnown RBP11.71□□□□□ -0.53
CSMD2-203ENST00000373377 SNX14Q9Y5W7 946 aa11.71□□□□□ -0.53
CSMD2-203ENST00000373377 ANKARQ7Z5J8 1434 aa11.71□□□□□ -0.54
CSMD2-203ENST00000373377 MTERF4Q7Z6M4 381 aaKnown RBP11.71□□□□□ -0.54
CSMD2-203ENST00000373377 ZNF710Q8N1W2 664 aa11.71□□□□□ -0.54
CSMD2-203ENST00000373377 FBXW7Q969H0 707 aa11.71□□□□□ -0.54
CSMD2-203ENST00000373377 ESF1Q9H501 851 aaKnown RBP11.71□□□□□ -0.54
CSMD2-203ENST00000373377 TAOK2Q9UL54 1235 aa11.71□□□□□ -0.54
CSMD2-203ENST00000373377 KDM4AO75164 1064 aa11.7□□□□□ -0.54
CSMD2-203ENST00000373377 CCDC30Q5VVM6 783 aa11.7□□□□□ -0.54
CSMD2-203ENST00000373377 RUFY3Q7L099 469 aa11.7□□□□□ -0.54
CSMD2-203ENST00000373377 ACEP12821 1306 aa11.7□□□□□ -0.54
CSMD2-203ENST00000373377 F13A1P00488 732 aa11.7□□□□□ -0.54
CSMD2-203ENST00000373377 UBE2HP62256 183 aa11.7□□□□□ -0.54
CSMD2-203ENST00000373377 LUZP1Q86V48 1076 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms