RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 ANO2Q9NQ90 1003 aa29.18■■■□□ 2.26
CDK9-201ENST00000373264 STAP2Q9UGK3 403 aa29.18■■■□□ 2.26
CDK9-201ENST00000373264 POLA2Q14181 598 aa29.17■■■□□ 2.26
CDK9-201ENST00000373264 ADAMTSL3P82987 1691 aa29.17■■■□□ 2.26
CDK9-201ENST00000373264 NOL8Q76FK4 1167 aaKnown RBP29.16■■■□□ 2.26
CDK9-201ENST00000373264 NEK4P51957 841 aa29.16■■■□□ 2.26
CDK9-201ENST00000373264 RHPN1Q8TCX5 695 aa29.16■■■□□ 2.26
CDK9-201ENST00000373264 RGPD5Q99666 1765 aa29.16■■■□□ 2.26
CDK9-201ENST00000373264 ST18O60284 1047 aa29.15■■■□□ 2.26
CDK9-201ENST00000373264 BAG4O95429 457 aaKnown RBP29.15■■■□□ 2.26
CDK9-201ENST00000373264 GAS2L3Q86XJ1 694 aa29.15■■■□□ 2.26
CDK9-201ENST00000373264 CWF19L2Q2TBE0 894 aaKnown RBP29.15■■■□□ 2.26
CDK9-201ENST00000373264 GIGYF1O75420 1035 aaPredicted RBP29.14■■■□□ 2.26
CDK9-201ENST00000373264 MAP3K2Q9Y2U5 619 aa29.14■■■□□ 2.26
CDK9-201ENST00000373264 PHRF1Q9P1Y6 1649 aaKnown RBP29.14■■■□□ 2.26
CDK9-201ENST00000373264 EIF5BO60841 1220 aaKnown RBP29.14■■■□□ 2.25
CDK9-201ENST00000373264 SLIT3O75094 1523 aa29.14■■■□□ 2.25
CDK9-201ENST00000373264 AMOTQ4VCS5 1084 aa29.13■■■□□ 2.25
CDK9-201ENST00000373264 HOXB7P09629 217 aa29.13■■■□□ 2.25
CDK9-201ENST00000373264 SLC39A6Q13433 755 aa29.12■■■□□ 2.25
CDK9-201ENST00000373264 PI4K2BQ8TCG2 481 aa29.12■■■□□ 2.25
CDK9-201ENST00000373264 FOXD4L5Q5VV16 416 aaPredicted RBP29.11■■■□□ 2.25
CDK9-201ENST00000373264 FOXD4L4Q8WXT5 416 aaPredicted RBP29.11■■■□□ 2.25
CDK9-201ENST00000373264 DBF4Q9UBU7 674 aaPredicted RBP29.11■■■□□ 2.25
CDK9-201ENST00000373264 ZDHHC9Q9Y397 364 aa29.1■■■□□ 2.25
CDK9-201ENST00000373264 CYP2E1P05181 493 aaPredicted RBP29.1■■■□□ 2.25
CDK9-201ENST00000373264 AIMP1Q12904 312 aaKnown RBP29.1■■■□□ 2.25
CDK9-201ENST00000373264 MCTP1Q6DN14 999 aa29.1■■■□□ 2.25
CDK9-201ENST00000373264 PA2G4Q9UQ80 394 aaKnown RBP29.1■■■□□ 2.25
CDK9-201ENST00000373264 TRPM3Q9HCF6 1732 aaPredicted RBP29.09■■■□□ 2.25
CDK9-201ENST00000373264 CABLES1Q8TDN4 633 aa29.09■■■□□ 2.25
CDK9-201ENST00000373264 UPF3BQ9BZI7 483 aaKnown RBP29.09■■■□□ 2.25
CDK9-201ENST00000373264 C1orf167Q5SNV9 1468 aa29.09■■■□□ 2.25
CDK9-201ENST00000373264 NCAPD2Q15021 1401 aa29.08■■■□□ 2.25
CDK9-201ENST00000373264 TMX3Q96JJ7 454 aa29.08■■■□□ 2.25
CDK9-201ENST00000373264 ERBB3P21860 1342 aa29.07■■■□□ 2.24
CDK9-201ENST00000373264 RAB11FIP3O75154 756 aa29.06■■■□□ 2.24
CDK9-201ENST00000373264 GRPEL1Q9HAV7 217 aa29.06■■■□□ 2.24
CDK9-201ENST00000373264 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.06■■■□□ 2.24
CDK9-201ENST00000373264 KIF1BPQ96EK5 621 aa29.05■■■□□ 2.24
CDK9-201ENST00000373264 NLRP2Q9NX02 1062 aa29.05■■■□□ 2.24
CDK9-201ENST00000373264 C9orf78Q9NZ63 289 aaPredicted RBP29.05■■■□□ 2.24
CDK9-201ENST00000373264 CLEC17AQ6ZS10 378 aa29.05■■■□□ 2.24
CDK9-201ENST00000373264 HEG1Q9ULI3 1381 aa29.04■■■□□ 2.24
CDK9-201ENST00000373264 OS9Q13438 667 aaPredicted RBP29.04■■■□□ 2.24
CDK9-201ENST00000373264 PIP4K2AP48426 406 aaPredicted RBP29.03■■■□□ 2.24
CDK9-201ENST00000373264 KSR2Q6VAB6 950 aa29.03■■■□□ 2.24
CDK9-201ENST00000373264 C19orf44Q9H6X5 657 aa29.03■■■□□ 2.24
CDK9-201ENST00000373264 DDX49Q9Y6V7 483 aaKnown RBP29.03■■■□□ 2.24
CDK9-201ENST00000373264 NUCB2P80303 420 aa29.02■■■□□ 2.24
CDK9-201ENST00000373264 RRAGDQ9NQL2 400 aaPredicted RBP29.02■■■□□ 2.24
CDK9-201ENST00000373264 PDIA6Q15084 440 aa29.02■■■□□ 2.24
CDK9-201ENST00000373264 CHRNA2Q15822 529 aa29.02■■■□□ 2.24
CDK9-201ENST00000373264 MRE11P49959 708 aa29.01■■■□□ 2.24
CDK9-201ENST00000373264 AOX1Q06278 1338 aa29.01■■■□□ 2.23
CDK9-201ENST00000373264 KAZALD1Q96I82 304 aa29.01■■■□□ 2.23
CDK9-201ENST00000373264 MYL6BP14649 208 aa29■■■□□ 2.23
CDK9-201ENST00000373264 SKOR2Q2VWA4 1001 aaPredicted RBP29■■■□□ 2.23
CDK9-201ENST00000373264 NFATC2IPQ8NCF5 419 aa29■■■□□ 2.23
CDK9-201ENST00000373264 SUCLG2Q96I99 432 aa28.99■■■□□ 2.23
CDK9-201ENST00000373264 GOLGA6L22H0YM25 854 aa28.99■■■□□ 2.23
CDK9-201ENST00000373264 MCCP23508 829 aa28.99■■■□□ 2.23
CDK9-201ENST00000373264 CWC27Q6UX04 472 aaKnown RBP28.99■■■□□ 2.23
CDK9-201ENST00000373264 CWC22Q9HCG8 908 aaKnown RBP28.99■■■□□ 2.23
CDK9-201ENST00000373264 LMBRD1Q9NUN5 540 aa28.99■■■□□ 2.23
CDK9-201ENST00000373264 LARP6Q9BRS8 491 aaKnown RBP28.98■■■□□ 2.23
CDK9-201ENST00000373264 SPG7Q9UQ90 795 aa28.98■■■□□ 2.23
CDK9-201ENST00000373264 KDM6AO15550 1401 aaPredicted RBP28.98■■■□□ 2.23
CDK9-201ENST00000373264 SIPA1L3O60292 1781 aaPredicted RBP28.98■■■□□ 2.23
CDK9-201ENST00000373264 CAMTA1Q9Y6Y1 1673 aa28.97■■■□□ 2.23
CDK9-201ENST00000373264 NCLP19338 710 aaKnown RBP28.97■■■□□ 2.23
CDK9-201ENST00000373264 FAM43AQ8N2R8 423 aa28.97■■■□□ 2.23
CDK9-201ENST00000373264 RAPGEF4Q8WZA2 1011 aa28.97■■■□□ 2.23
CDK9-201ENST00000373264 ZNF790Q6PG37 636 aa28.97■■■□□ 2.23
CDK9-201ENST00000373264 JARID2Q92833 1246 aaPredicted RBP28.97■■■□□ 2.23
CDK9-201ENST00000373264 SGSM2O43147 1006 aa28.96■■■□□ 2.23
CDK9-201ENST00000373264 PRPF40AO75400 957 aaKnown RBP28.96■■■□□ 2.23
CDK9-201ENST00000373264 KLHDC4Q8TBB5 520 aa28.96■■■□□ 2.23
CDK9-201ENST00000373264 BICC1Q9H694 974 aaKnown RBP28.96■■■□□ 2.23
CDK9-201ENST00000373264 MEGF6O75095 1541 aa28.95■■■□□ 2.23
CDK9-201ENST00000373264 MTX1Q13505 466 aa28.95■■■□□ 2.23
CDK9-201ENST00000373264 KLHL40Q2TBA0 621 aa28.95■■■□□ 2.23
CDK9-201ENST00000373264 DTNBO60941 627 aa28.95■■■□□ 2.22
CDK9-201ENST00000373264 ALDH1L1O75891 902 aa28.95■■■□□ 2.22
CDK9-201ENST00000373264 IGKV5-2P06315 115 aa28.95■■■□□ 2.22
CDK9-201ENST00000373264 HSPA4P34932 840 aa28.95■■■□□ 2.22
CDK9-201ENST00000373264 RASEFQ8IZ41 740 aa28.95■■■□□ 2.22
CDK9-201ENST00000373264 HYPKQ9NX55 129 aa28.95■■■□□ 2.22
CDK9-201ENST00000373264 NPHP3Q7Z494 1330 aa28.94■■■□□ 2.22
CDK9-201ENST00000373264 TMEM94Q12767 1356 aa28.94■■■□□ 2.22
CDK9-201ENST00000373264 DDX21Q9NR30 783 aaKnown RBP eCLIP28.94■■■□□ 2.22
CDK9-201ENST00000373264 SLC52A2Q9HAB3 445 aa28.94■■■□□ 2.22
CDK9-201ENST00000373264 OVOS2A0A0G2JMS6 1433 aa28.93■■■□□ 2.22
CDK9-201ENST00000373264 ALS2Q96Q42 1657 aa28.93■■■□□ 2.22
CDK9-201ENST00000373264 GRM8O00222 908 aa28.93■■■□□ 2.22
CDK9-201ENST00000373264 CSB-PGBD3P0DP91 1061 aa28.93■■■□□ 2.22
CDK9-201ENST00000373264 ATF3P18847 181 aa28.93■■■□□ 2.22
CDK9-201ENST00000373264 ANAPC15P60006 121 aa28.93■■■□□ 2.22
CDK9-201ENST00000373264 CAVIN1Q6NZI2 390 aaKnown RBP28.93■■■□□ 2.22
CDK9-201ENST00000373264 ZNF496Q96IT1 587 aaPredicted RBP28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms