RNA–Protein interactions for RNA: ENST00000373040.4

RPA4-201, Transcript of replication protein A4, humanhuman

APPRIS P1 BASIC

Gene RPA4, Length 1,560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA4-201ENST00000373040 STK31Q9BXU1 1019 aa13.9□□□□□ -0.18
RPA4-201ENST00000373040 LAMB4A4D0S4 1761 aa13.9□□□□□ -0.18
RPA4-201ENST00000373040 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
RPA4-201ENST00000373040 SLC27A3Q5K4L6 730 aa13.89□□□□□ -0.19
RPA4-201ENST00000373040 MRPL50Q8N5N7 158 aaKnown RBP13.89□□□□□ -0.19
RPA4-201ENST00000373040 LRRC4BQ9NT99 713 aa13.89□□□□□ -0.19
RPA4-201ENST00000373040 SMC4Q9NTJ3 1288 aa13.89□□□□□ -0.19
RPA4-201ENST00000373040 CHPF2Q9P2E5 772 aa13.89□□□□□ -0.19
RPA4-201ENST00000373040 DBF4Q9UBU7 674 aaPredicted RBP13.89□□□□□ -0.19
RPA4-201ENST00000373040 CICQ96RK0 1608 aaPredicted RBP13.89□□□□□ -0.19
RPA4-201ENST00000373040 PDIA6Q15084 440 aa13.88□□□□□ -0.19
RPA4-201ENST00000373040 ILDR2Q71H61 639 aa13.88□□□□□ -0.19
RPA4-201ENST00000373040 LINC00116Q8NCU8 138 aa13.88□□□□□ -0.19
RPA4-201ENST00000373040 DDX21Q9NR30 783 aaKnown RBP eCLIP13.88□□□□□ -0.19
RPA4-201ENST00000373040 NBPF26B4DH59 902 aa13.88□□□□□ -0.19
RPA4-201ENST00000373040 ANXA1P04083 346 aa13.88□□□□□ -0.19
RPA4-201ENST00000373040 BAG6P46379 1132 aa13.88□□□□□ -0.19
RPA4-201ENST00000373040 PIP4K2AP48426 406 aaPredicted RBP13.88□□□□□ -0.19
RPA4-201ENST00000373040 BRPF1P55201 1214 aaPredicted RBP13.88□□□□□ -0.19
RPA4-201ENST00000373040 EN1Q05925 392 aaPredicted RBP13.88□□□□□ -0.19
RPA4-201ENST00000373040 PROSER3Q2NL68 480 aa13.88□□□□□ -0.19
RPA4-201ENST00000373040 NBPF14Q5TI25 921 aa13.88□□□□□ -0.19
RPA4-201ENST00000373040 NBPF10Q6P3W6 841 aaKnown RBP13.88□□□□□ -0.19
RPA4-201ENST00000373040 NBPF15Q8N660 670 aa13.88□□□□□ -0.19
RPA4-201ENST00000373040 CAMKK2Q96RR4 588 aa13.88□□□□□ -0.19
RPA4-201ENST00000373040 EP400Q96L91 3159 aa13.87□□□□□ -0.19
RPA4-201ENST00000373040 ERBB4Q15303 1308 aa13.87□□□□□ -0.19
RPA4-201ENST00000373040 MYL6BP14649 208 aa13.87□□□□□ -0.19
RPA4-201ENST00000373040 CRKLP46109 303 aaKnown RBP13.87□□□□□ -0.19
RPA4-201ENST00000373040 INTS5Q6P9B9 1019 aaKnown RBP13.87□□□□□ -0.19
RPA4-201ENST00000373040 G2E3Q7L622 706 aa13.87□□□□□ -0.19
RPA4-201ENST00000373040 CCDC87Q9NVE4 849 aa13.87□□□□□ -0.19
RPA4-201ENST00000373040 SUPT16HQ9Y5B9 1047 aaKnown RBP13.87□□□□□ -0.19
RPA4-201ENST00000373040 COL5A3P25940 1745 aaPredicted RBP13.86□□□□□ -0.19
RPA4-201ENST00000373040 TAF1LQ8IZX4 1826 aa13.86□□□□□ -0.19
RPA4-201ENST00000373040 CACNA1FO60840 1977 aa13.86□□□□□ -0.19
RPA4-201ENST00000373040 CANXP27824 592 aaKnown RBP13.86□□□□□ -0.19
RPA4-201ENST00000373040 EZH2Q15910 746 aaKnown RBP13.86□□□□□ -0.19
RPA4-201ENST00000373040 RC3H1Q5TC82 1133 aaKnown RBP13.86□□□□□ -0.19
RPA4-201ENST00000373040 DEFB132Q7Z7B7 95 aa13.86□□□□□ -0.19
RPA4-201ENST00000373040 UPF1Q92900 1129 aaKnown RBP eCLIP13.86□□□□□ -0.19
RPA4-201ENST00000373040 PHAXQ9H814 394 aaKnown RBP13.86□□□□□ -0.19
RPA4-201ENST00000373040 HYPKQ9NX55 129 aa13.86□□□□□ -0.19
RPA4-201ENST00000373040 RGPD3A6NKT7 1758 aaPredicted RBP13.85□□□□□ -0.19
RPA4-201ENST00000373040 RGPD4Q7Z3J3 1758 aa13.85□□□□□ -0.19
RPA4-201ENST00000373040 HMGB2P26583 209 aaKnown RBP13.85□□□□□ -0.19
RPA4-201ENST00000373040 NOB1Q9ULX3 412 aaKnown RBP13.85□□□□□ -0.19
RPA4-201ENST00000373040 ZBTB1Q9Y2K1 713 aa13.85□□□□□ -0.19
RPA4-201ENST00000373040 LRP10Q7Z4F1 713 aa13.84□□□□□ -0.19
RPA4-201ENST00000373040 FRAT1Q92837 279 aaPredicted RBP13.84□□□□□ -0.19
RPA4-201ENST00000373040 CNTNAP4Q9C0A0 1308 aa13.84□□□□□ -0.19
RPA4-201ENST00000373040 MYH14Q7Z406 1995 aaKnown RBP13.84□□□□□ -0.19
RPA4-201ENST00000373040 PLIN1O60240 522 aa13.83□□□□□ -0.19
RPA4-201ENST00000373040 IL6STP40189 918 aaPredicted RBP13.83□□□□□ -0.19
RPA4-201ENST00000373040 COPS6Q7L5N1 327 aa13.83□□□□□ -0.19
RPA4-201ENST00000373040 C4BP0C0L5 1744 aa13.83□□□□□ -0.2
RPA4-201ENST00000373040 RREB1Q92766 1687 aa13.83□□□□□ -0.2
RPA4-201ENST00000373040 KIF16BQ96L93 1317 aa13.83□□□□□ -0.2
RPA4-201ENST00000373040 IPO8O15397 1037 aaKnown RBP13.83□□□□□ -0.2
RPA4-201ENST00000373040 AIMP1Q12904 312 aaKnown RBP13.83□□□□□ -0.2
RPA4-201ENST00000373040 FLIIQ13045 1269 aa13.83□□□□□ -0.2
RPA4-201ENST00000373040 XAGE3Q8WTP9 111 aa13.83□□□□□ -0.2
RPA4-201ENST00000373040 ARHGAP45Q92619 1136 aa13.83□□□□□ -0.2
RPA4-201ENST00000373040 RNF123Q5XPI4 1314 aa13.82□□□□□ -0.2
RPA4-201ENST00000373040 RPS6KA4O75676 772 aa13.82□□□□□ -0.2
RPA4-201ENST00000373040 EIF5P55010 431 aaKnown RBP13.82□□□□□ -0.2
RPA4-201ENST00000373040 RRP1P56182 461 aaKnown RBP13.82□□□□□ -0.2
RPA4-201ENST00000373040 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.82□□□□□ -0.2
RPA4-201ENST00000373040 ZNF330Q9Y3S2 320 aaPredicted RBP13.82□□□□□ -0.2
RPA4-201ENST00000373040 PTPRCP08575 1304 aa13.81□□□□□ -0.2
RPA4-201ENST00000373040 ZKSCAN2Q63HK3 967 aa13.81□□□□□ -0.2
RPA4-201ENST00000373040 GNPATO15228 680 aa13.8□□□□□ -0.2
RPA4-201ENST00000373040 FKBP5Q13451 457 aaPredicted RBP13.8□□□□□ -0.2
RPA4-201ENST00000373040 ATF7IPQ6VMQ6 1270 aa13.8□□□□□ -0.2
RPA4-201ENST00000373040 TTLL7Q6ZT98 887 aa13.8□□□□□ -0.2
RPA4-201ENST00000373040 NPM2Q86SE8 214 aaKnown RBP13.8□□□□□ -0.2
RPA4-201ENST00000373040 AK7Q96M32 723 aa13.8□□□□□ -0.2
RPA4-201ENST00000373040 RTCBQ9Y3I0 505 aaKnown RBP13.8□□□□□ -0.2
RPA4-201ENST00000373040 TRIM27P14373 513 aa13.79□□□□□ -0.2
RPA4-201ENST00000373040 ANKRD13DQ6ZTN6 518 aa13.79□□□□□ -0.2
RPA4-201ENST00000373040 SMIM5Q71RC9 77 aa13.79□□□□□ -0.2
RPA4-201ENST00000373040 AKT1S1Q96B36 256 aa13.79□□□□□ -0.2
RPA4-201ENST00000373040 ARXQ96QS3 562 aa13.79□□□□□ -0.2
RPA4-201ENST00000373040 API5Q9BZZ5 524 aaKnown RBP13.79□□□□□ -0.2
RPA4-201ENST00000373040 TNNQ9UQP3 1299 aa13.79□□□□□ -0.2
RPA4-201ENST00000373040 PI4KAP2A4QPH2 592 aa13.79□□□□□ -0.2
RPA4-201ENST00000373040 DDX58O95786 925 aaKnown RBP13.79□□□□□ -0.2
RPA4-201ENST00000373040 ZNF827Q17R98 1081 aa13.79□□□□□ -0.2
RPA4-201ENST00000373040 KSR2Q6VAB6 950 aa13.79□□□□□ -0.2
RPA4-201ENST00000373040 AMIGO3Q86WK7 504 aa13.79□□□□□ -0.2
RPA4-201ENST00000373040 PI4KAP1Q8N8J0 262 aa13.79□□□□□ -0.2
RPA4-201ENST00000373040 TBC1D2BQ9UPU7 963 aa13.79□□□□□ -0.2
RPA4-201ENST00000373040 A0A087WZG4 1122 aa13.78□□□□□ -0.2
RPA4-201ENST00000373040 F6X3S4 739 aa13.78□□□□□ -0.2
RPA4-201ENST00000373040 TRAPPC3LQ5T215 181 aa13.78□□□□□ -0.2
RPA4-201ENST00000373040 RIC3Q7Z5B4 369 aa13.78□□□□□ -0.2
RPA4-201ENST00000373040 DZIP3Q86Y13 1208 aaKnown RBP13.78□□□□□ -0.2
RPA4-201ENST00000373040 PLBD2Q8NHP8 589 aa13.78□□□□□ -0.2
RPA4-201ENST00000373040 CLUAP1Q96AJ1 413 aa13.78□□□□□ -0.2
RPA4-201ENST00000373040 COL15A1P39059 1388 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms