RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 DBF4Q9UBU7 674 aaPredicted RBP25.26■■□□□ 1.63
VEGFA-204ENST00000372064 PRAMEF22A3QJZ6 481 aa25.26■■□□□ 1.63
VEGFA-204ENST00000372064 RAB11FIP3O75154 756 aa25.26■■□□□ 1.63
VEGFA-204ENST00000372064 PROSER3Q2NL68 480 aa25.24■■□□□ 1.63
VEGFA-204ENST00000372064 IL1RAPL2Q9NP60 686 aa25.24■■□□□ 1.63
VEGFA-204ENST00000372064 NLRP2Q9NX02 1062 aa25.23■■□□□ 1.63
VEGFA-204ENST00000372064 GBP4Q96PP9 640 aa25.23■■□□□ 1.63
VEGFA-204ENST00000372064 ESYT1Q9BSJ8 1104 aa25.23■■□□□ 1.63
VEGFA-204ENST00000372064 SURF6O75683 361 aaKnown RBP25.22■■□□□ 1.63
VEGFA-204ENST00000372064 SRGAP3O43295 1099 aa25.22■■□□□ 1.63
VEGFA-204ENST00000372064 RAPGEF4Q8WZA2 1011 aa25.22■■□□□ 1.63
VEGFA-204ENST00000372064 CABLES1Q8TDN4 633 aa25.21■■□□□ 1.63
VEGFA-204ENST00000372064 CLEC17AQ6ZS10 378 aa25.21■■□□□ 1.63
VEGFA-204ENST00000372064 DCCP43146 1447 aa25.21■■□□□ 1.63
VEGFA-204ENST00000372064 ST18O60284 1047 aa25.2■■□□□ 1.62
VEGFA-204ENST00000372064 CHMLP26374 656 aa25.2■■□□□ 1.62
VEGFA-204ENST00000372064 L1TD1Q5T7N2 865 aaKnown RBP25.2■■□□□ 1.62
VEGFA-204ENST00000372064 STRCP1A6NGW2 1772 aa25.2■■□□□ 1.62
VEGFA-204ENST00000372064 MAP3K2Q9Y2U5 619 aa25.19■■□□□ 1.62
VEGFA-204ENST00000372064 FSD2A1L4K1 749 aa25.19■■□□□ 1.62
VEGFA-204ENST00000372064 TRIM6-TRIM34B2RNG4 842 aa25.19■■□□□ 1.62
VEGFA-204ENST00000372064 RILPL2Q969X0 211 aa25.19■■□□□ 1.62
VEGFA-204ENST00000372064 ABCC6O95255 1503 aa25.19■■□□□ 1.62
VEGFA-204ENST00000372064 NUTM1Q86Y26 1132 aa25.18■■□□□ 1.62
VEGFA-204ENST00000372064 CRYBG1Q9Y4K1 1723 aa25.18■■□□□ 1.62
VEGFA-204ENST00000372064 RHPN1Q8TCX5 695 aa25.18■■□□□ 1.62
VEGFA-204ENST00000372064 PTMSP20962 102 aa25.17■■□□□ 1.62
VEGFA-204ENST00000372064 MTX1Q13505 466 aa25.17■■□□□ 1.62
VEGFA-204ENST00000372064 UNC5CLQ8IV45 518 aa25.17■■□□□ 1.62
VEGFA-204ENST00000372064 COL18A1P39060 1754 aa25.17■■□□□ 1.62
VEGFA-204ENST00000372064 ALDH1L1O75891 902 aa25.17■■□□□ 1.62
VEGFA-204ENST00000372064 SLC39A6Q13433 755 aa25.17■■□□□ 1.62
VEGFA-204ENST00000372064 KSR2Q6VAB6 950 aa25.17■■□□□ 1.62
VEGFA-204ENST00000372064 KIF1BPQ96EK5 621 aa25.16■■□□□ 1.62
VEGFA-204ENST00000372064 NPHP3Q7Z494 1330 aa25.16■■□□□ 1.62
VEGFA-204ENST00000372064 TATP17735 454 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-204ENST00000372064 CHRNA2Q15822 529 aa25.16■■□□□ 1.62
VEGFA-204ENST00000372064 CADPS2Q86UW7 1296 aa25.16■■□□□ 1.62
VEGFA-204ENST00000372064 IL17RAQ96F46 866 aa25.16■■□□□ 1.62
VEGFA-204ENST00000372064 SCN11AQ9UI33 1791 aa25.16■■□□□ 1.62
VEGFA-204ENST00000372064 CSB-PGBD3P0DP91 1061 aa25.15■■□□□ 1.62
VEGFA-204ENST00000372064 KDM6AO15550 1401 aaPredicted RBP25.15■■□□□ 1.62
VEGFA-204ENST00000372064 SSFA2P28290 1259 aa25.15■■□□□ 1.62
VEGFA-204ENST00000372064 PHKG2P15735 406 aa25.14■■□□□ 1.62
VEGFA-204ENST00000372064 PI4K2BQ8TCG2 481 aa25.14■■□□□ 1.62
VEGFA-204ENST00000372064 HYPKQ9NX55 129 aa25.14■■□□□ 1.62
VEGFA-204ENST00000372064 PLEKHG2Q9H7P9 1386 aa25.14■■□□□ 1.62
VEGFA-204ENST00000372064 MEGF6O75095 1541 aa25.14■■□□□ 1.61
VEGFA-204ENST00000372064 HSPA2P54652 639 aa25.14■■□□□ 1.61
VEGFA-204ENST00000372064 CWF19L2Q2TBE0 894 aaKnown RBP25.14■■□□□ 1.61
VEGFA-204ENST00000372064 HSP90AB4PQ58FF6 505 aa25.14■■□□□ 1.61
VEGFA-204ENST00000372064 ZNF790Q6PG37 636 aa25.14■■□□□ 1.61
VEGFA-204ENST00000372064 SLC52A2Q9HAB3 445 aa25.14■■□□□ 1.61
VEGFA-204ENST00000372064 EPB41L2O43491 1005 aaKnown RBP25.13■■□□□ 1.61
VEGFA-204ENST00000372064 GZF1Q9H116 711 aaPredicted RBP25.13■■□□□ 1.61
VEGFA-204ENST00000372064 CWC22Q9HCG8 908 aaKnown RBP25.13■■□□□ 1.61
VEGFA-204ENST00000372064 C9orf78Q9NZ63 289 aaPredicted RBP25.13■■□□□ 1.61
VEGFA-204ENST00000372064 ANAPC15P60006 121 aa25.13■■□□□ 1.61
VEGFA-204ENST00000372064 GOLGA6L3A6NEY3 463 aa25.13■■□□□ 1.61
VEGFA-204ENST00000372064 CYP2E1P05181 493 aaPredicted RBP25.13■■□□□ 1.61
VEGFA-204ENST00000372064 DDX21Q9NR30 783 aaKnown RBP eCLIP25.13■■□□□ 1.61
VEGFA-204ENST00000372064 SPG7Q9UQ90 795 aa25.13■■□□□ 1.61
VEGFA-204ENST00000372064 TNS3Q68CZ2 1445 aa25.12■■□□□ 1.61
VEGFA-204ENST00000372064 SKOR2Q2VWA4 1001 aaPredicted RBP25.12■■□□□ 1.61
VEGFA-204ENST00000372064 NFATC2IPQ8NCF5 419 aa25.12■■□□□ 1.61
VEGFA-204ENST00000372064 USP42Q9H9J4 1324 aaKnown RBP25.12■■□□□ 1.61
VEGFA-204ENST00000372064 AIMP1Q12904 312 aaKnown RBP25.12■■□□□ 1.61
VEGFA-204ENST00000372064 PDIA6Q15084 440 aa25.12■■□□□ 1.61
VEGFA-204ENST00000372064 MCCP23508 829 aa25.11■■□□□ 1.61
VEGFA-204ENST00000372064 NUCB2P80303 420 aa25.11■■□□□ 1.61
VEGFA-204ENST00000372064 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.11■■□□□ 1.617e-31■□□□□ 9.1
VEGFA-204ENST00000372064 C5P01031 1676 aa25.1■■□□□ 1.61
VEGFA-204ENST00000372064 IFNL2Q8IZJ0 200 aa25.09■■□□□ 1.61
VEGFA-204ENST00000372064 ANO2Q9NQ90 1003 aa25.09■■□□□ 1.61
VEGFA-204ENST00000372064 AK9Q5TCS8 1911 aa25.09■■□□□ 1.61
VEGFA-204ENST00000372064 UTYO14607 1347 aa25.09■■□□□ 1.61
VEGFA-204ENST00000372064 SPATA31A3Q5VYP0 1347 aa25.09■■□□□ 1.61
VEGFA-204ENST00000372064 MAP4K4O95819 1239 aaPredicted RBP25.09■■□□□ 1.61
VEGFA-204ENST00000372064 HDAC5Q9UQL6 1122 aa25.09■■□□□ 1.61
VEGFA-204ENST00000372064 LINS1Q8NG48 757 aa25.08■■□□□ 1.61
VEGFA-204ENST00000372064 MRC1P22897 1456 aa25.08■■□□□ 1.61
VEGFA-204ENST00000372064 BAG4O95429 457 aaKnown RBP25.07■■□□□ 1.6
VEGFA-204ENST00000372064 DDX58O95786 925 aaKnown RBP25.07■■□□□ 1.6
VEGFA-204ENST00000372064 MCM2P49736 904 aa25.07■■□□□ 1.6
VEGFA-204ENST00000372064 OS9Q13438 667 aaPredicted RBP25.07■■□□□ 1.6
VEGFA-204ENST00000372064 PALD1Q9ULE6 856 aa25.07■■□□□ 1.6
VEGFA-204ENST00000372064 IL25Q9H293 177 aa25.07■■□□□ 1.6
VEGFA-204ENST00000372064 ISY1Q9ULR0 285 aaKnown RBP25.07■■□□□ 1.6
VEGFA-204ENST00000372064 CYP27B1O15528 508 aa25.06■■□□□ 1.6
VEGFA-204ENST00000372064 ZNF496Q96IT1 587 aaPredicted RBP25.06■■□□□ 1.6
VEGFA-204ENST00000372064 TTC41PQ6P2S7 1318 aa25.06■■□□□ 1.6
VEGFA-204ENST00000372064 XRCC6P12956 609 aaKnown RBP eCLIP25.06■■□□□ 1.67e-11■□□□□ 8.3
VEGFA-204ENST00000372064 NEK4P51957 841 aa25.06■■□□□ 1.6
VEGFA-204ENST00000372064 PKD1L3Q7Z443 1732 aa25.06■■□□□ 1.6
VEGFA-204ENST00000372064 MYL6BP14649 208 aa25.06■■□□□ 1.6
VEGFA-204ENST00000372064 PA2G4Q9UQ80 394 aaKnown RBP25.06■■□□□ 1.6
VEGFA-204ENST00000372064 GRM8O00222 908 aa25.05■■□□□ 1.6
VEGFA-204ENST00000372064 ZGPATQ8N5A5 531 aaKnown RBP25.05■■□□□ 1.6
VEGFA-204ENST00000372064 SUCLG2Q96I99 432 aa25.05■■□□□ 1.6
VEGFA-204ENST00000372064 GOLGA6L22H0YM25 854 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms