RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 MYOM2P54296 1465 aa10.88□□□□□ -0.67
SMARCA1-202ENST00000371122 IDH1O75874 414 aaKnown RBP10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 GPTP24298 496 aa10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 BLOC1S2Q6QNY1 142 aa10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 TNRQ92752 1358 aa10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 ME1P48163 572 aa10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 PIP4K2BP78356 416 aa10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 FILIP1Q7Z7B0 1213 aa10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 LRRC2Q9BYS8 371 aa10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 TMX4Q9H1E5 349 aaPredicted RBP10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 PDRG1Q9NUG6 133 aa10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 ESPNB1AK53 854 aa10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 PPP1R42Q7Z4L9 355 aa10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 NUP133Q8WUM0 1156 aa10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 TSPY26PQ9H489 355 aa10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 SCAF11Q99590 1463 aaKnown RBP10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 PHF8Q9UPP1 1060 aa10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 DIP2AQ14689 1571 aa10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 LAMC1P11047 1609 aa10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 CT47B1P0C2W7 299 aaPredicted RBP10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 TBC1D32Q96NH3 1257 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 ABCF2Q9UG63 623 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 PA2G4Q9UQ80 394 aaKnown RBP10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 SLC4A8Q2Y0W8 1093 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 CFAP65Q6ZU64 1925 aaKnown RBP10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 CKAP2LQ8IYA6 745 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 PARD3Q8TEW0 1356 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 SMC2O95347 1197 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 ADAMTS2O95450 1211 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 SDSP20132 328 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 PSMA5P28066 241 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 NECAB1Q8N987 351 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 CCDC34Q96HJ3 373 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 NINLQ9Y2I6 1382 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 CCT2P78371 535 aaKnown RBP10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 CCDC57Q2TAC2 916 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 TTC39AQ5SRH9 613 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 NOC3LQ8WTT2 800 aaKnown RBP10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 KNDC1Q76NI1 1749 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 ERICH2A1L162 156 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 HAND2P61296 217 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 STK38Q15208 465 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 G2E3Q7L622 706 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 UBE3BQ7Z3V4 1068 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 KINO60870 393 aaKnown RBP10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 TPM3P06753 285 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 ZBTB9Q96C00 473 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 CEP126Q9P2H0 1117 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 NWD1Q149M9 1564 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 CPA1P15085 419 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 SKIDA1Q1XH10 827 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 IQGAP1P46940 1657 aa10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 RAB11FIP3O75154 756 aa10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 EIF4A2Q14240 407 aaKnown RBP10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 DNAAF4Q8WXU2 420 aa10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 A0A087WZG4 1122 aa10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 MBD3O95983 291 aa10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 ATP2B2Q01814 1243 aa10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 MAP3K2Q9Y2U5 619 aa10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 LRRFIP1Q32MZ4 808 aaKnown RBP10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 CHPF2Q9P2E5 772 aa10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 MTHFSDQ2M296 383 aaKnown RBP10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 ALDH1L2Q3SY69 923 aa10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 ISM2Q6H9L7 571 aa10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 KIF1BPQ96EK5 621 aa10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 VAMP4O75379 141 aa10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 ZGPATQ8N5A5 531 aaKnown RBP10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 TNMDQ9H2S6 317 aa10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 SAFBQ15424 915 aaKnown RBP eCLIP10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 CCDC158Q5M9N0 1113 aa10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 CCDC144CPQ8IYA2 1237 aa10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 ZNF830Q96NB3 372 aaPredicted RBP10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 USP25Q9UHP3 1055 aa10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 WDR33Q9C0J8 1336 aaKnown RBP10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 UHRF1BP1Q6BDS2 1440 aa10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 MPHOSPH8Q99549 860 aa10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 PHAXQ9H814 394 aaKnown RBP10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 IQSEC3Q9UPP2 1182 aaPredicted RBP10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 CWF19L2Q2TBE0 894 aaKnown RBP10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 DDX46Q7L014 1031 aaKnown RBP10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 UBE2Q2Q8WVN8 375 aa10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 SPATA32Q96LK8 384 aa10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 TRPM1Q7Z4N2 1603 aa10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 KIF6Q6ZMV9 814 aa10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 CHAMP1Q96JM3 812 aa10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 TBC1D2BQ9UPU7 963 aa10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 XRN1Q8IZH2 1706 aaKnown RBP10.8□□□□□ -0.68
SMARCA1-202ENST00000371122 KRT85P78386 507 aa10.8□□□□□ -0.68
SMARCA1-202ENST00000371122 HSP90AB3PQ58FF7 597 aa10.8□□□□□ -0.68
SMARCA1-202ENST00000371122 CHD2O14647 1828 aaKnown RBP10.8□□□□□ -0.68
SMARCA1-202ENST00000371122 BAG4O95429 457 aaKnown RBP10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 MCM2P49736 904 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 BMP2KLQ5H9B9 411 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 MEX3CQ5U5Q3 659 aaKnown RBP10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 ZNF771Q7L3S4 317 aaPredicted RBP10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 GOLIM4O00461 696 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 NUCB1Q02818 461 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 ERC1Q8IUD2 1116 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 KLHDC4Q8TBB5 520 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms