RNA–Protein interactions for RNA: ENST00000371037.8

SGIP1-203, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SGIP1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-203ENST00000371037 FTOQ9C0B1 505 aaKnown RBP eCLIP6.55□□□□□ -1.36
SGIP1-203ENST00000371037 NCKAP5LQ9HCH0 1330 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 CALM1P0DP23 149 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 CALM2P0DP24 149 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 CALM3P0DP25 149 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 INF2Q27J81 1249 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 C4orf50Q6ZRC1 276 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 PPP1R42Q7Z4L9 355 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 NOP58Q9Y2X3 529 aaKnown RBP6.55□□□□□ -1.36
SGIP1-203ENST00000371037 ROCK1Q13464 1354 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 RAB3GAP2Q9H2M9 1393 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 CEP164Q9UPV0 1460 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 ANKRD18BA2A2Z9 1011 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 CCDC91Q7Z6B0 441 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 COG6Q9Y2V7 657 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 GNAI1P63096 354 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 PPP1R12AO14974 1030 aaPredicted RBP6.55□□□□□ -1.36
SGIP1-203ENST00000371037 TBC1D12O60347 775 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 RBM17Q96I25 401 aaKnown RBP6.55□□□□□ -1.36
SGIP1-203ENST00000371037 FERMT1Q9BQL6 677 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 ODF2LQ9ULJ1 636 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 CUL4BQ13620 913 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 TSTA3Q13630 321 aaPredicted RBP6.55□□□□□ -1.36
SGIP1-203ENST00000371037 CCDC152Q4G0S7 254 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 MIS18AQ9NYP9 233 aa6.55□□□□□ -1.36
SGIP1-203ENST00000371037 GOLGA6CA6NDK9 693 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 GOLGA6BA6NDN3 693 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 H0YIN7 160 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 GOLGA6DP0CG33 693 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 CFAP70Q5T0N1 1121 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 ZNF467Q7Z7K2 595 aaPredicted RBP6.54□□□□□ -1.36
SGIP1-203ENST00000371037 GOLGA6AQ9NYA3 693 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 CLGNO14967 610 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 IRX3P78415 501 aaPredicted RBP6.54□□□□□ -1.36
SGIP1-203ENST00000371037 RAB3GAP1Q15042 981 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 CEP57L1Q8IYX8 460 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 JARID2Q92833 1246 aaPredicted RBP6.54□□□□□ -1.36
SGIP1-203ENST00000371037 TSG101Q99816 390 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 SPDYE16A6NNV3 312 aaPredicted RBP6.54□□□□□ -1.36
SGIP1-203ENST00000371037 TMCO5BA8MYB1 307 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 SPDYE2Q495Y8 402 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 NIM1KQ8IY84 436 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.54□□□□□ -1.36
SGIP1-203ENST00000371037 NOP56O00567 594 aaKnown RBP6.54□□□□□ -1.36
SGIP1-203ENST00000371037 TRAPPC3LQ5T215 181 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 HOOK3Q86VS8 718 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 LRPPRCP42704 1394 aaKnown RBP6.54□□□□□ -1.36
SGIP1-203ENST00000371037 GSTTP1A0A1W2PQM5 241 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 H7C1D1 291 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 RBM25P49756 843 aaKnown RBP6.54□□□□□ -1.36
SGIP1-203ENST00000371037 Q3C1V9 767 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 TCERG1LQ5VWI1 586 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 SPATA17Q96L03 361 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.54□□□□□ -1.36
SGIP1-203ENST00000371037 POLIQ9UNA4 740 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 SNX16P57768 344 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 PPP2R5CQ13362 524 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 CCDC174Q6PII3 467 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 CABLES1Q8TDN4 633 aa6.54□□□□□ -1.36
SGIP1-203ENST00000371037 RASA3Q14644 834 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 AXDND1Q5T1B0 1012 aaPredicted RBP6.53□□□□□ -1.36
SGIP1-203ENST00000371037 CCDC144CPQ8IYA2 1237 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 SMARCC2Q8TAQ2 1214 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 IFIT5Q13325 482 aaKnown RBP6.53□□□□□ -1.36
SGIP1-203ENST00000371037 TMEM266Q2M3C6 531 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 CCDC178Q5BJE1 867 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 CCDC24Q8N4L8 307 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 ZC3H12CQ9C0D7 883 aaKnown RBP6.53□□□□□ -1.36
SGIP1-203ENST00000371037 DDX49Q9Y6V7 483 aaKnown RBP6.53□□□□□ -1.36
SGIP1-203ENST00000371037 KIF5BP33176 963 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 IFT57Q9NWB7 429 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 RBM27Q9P2N5 1060 aaKnown RBP6.53□□□□□ -1.36
SGIP1-203ENST00000371037 BAG3O95817 575 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 RABEP1Q15276 862 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 RBM46Q8TBY0 533 aaKnown RBP6.53□□□□□ -1.36
SGIP1-203ENST00000371037 LBHD1Q9BQE6 289 aaPredicted RBP6.53□□□□□ -1.36
SGIP1-203ENST00000371037 FAM13BQ9NYF5 915 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 PSDA5PKW4 1024 aaPredicted RBP6.53□□□□□ -1.36
SGIP1-203ENST00000371037 SLC4A2P04920 1241 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 ZNF804AQ7Z570 1209 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 SLC7A5P2Q9GIP4 190 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 PFDN4Q9NQP4 134 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 CCDC85CA6NKD9 419 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 SRGAP3O43295 1099 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 SERPINC1P01008 464 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 PSMD2Q13200 908 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 CDC5LQ99459 802 aaKnown RBP6.53□□□□□ -1.36
SGIP1-203ENST00000371037 MOSPD1Q9UJG1 213 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 CCNL1Q9UK58 526 aaPredicted RBP6.53□□□□□ -1.36
SGIP1-203ENST00000371037 NSFL1CQ9UNZ2 370 aaKnown RBP6.53□□□□□ -1.36
SGIP1-203ENST00000371037 CSADQ9Y600 493 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 MYO10Q9HD67 2058 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 EIF5P55010 431 aaKnown RBP6.53□□□□□ -1.36
SGIP1-203ENST00000371037 ARPP19P56211 112 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 GSE1Q14687 1217 aa6.53□□□□□ -1.36
SGIP1-203ENST00000371037 PDIA4P13667 645 aaKnown RBP6.52□□□□□ -1.37
SGIP1-203ENST00000371037 FBXW4P57775 412 aa6.52□□□□□ -1.37
SGIP1-203ENST00000371037 KAT14Q9H8E8 782 aa6.52□□□□□ -1.37
SGIP1-203ENST00000371037 CABP1Q9NZU7 370 aa6.52□□□□□ -1.37
SGIP1-203ENST00000371037 CCDC7Q96M83 1385 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms