RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 OGFRQ9NZT2 677 aa11.56□□□□□ -0.56
LRRC40-201ENST00000370952 SNX14Q9Y5W7 946 aa11.56□□□□□ -0.56
LRRC40-201ENST00000370952 VPS37CA5D8V6 355 aaPredicted RBP11.56□□□□□ -0.56
LRRC40-201ENST00000370952 FEZ1Q99689 392 aa11.56□□□□□ -0.56
LRRC40-201ENST00000370952 CTNNA3Q9UI47 895 aa11.56□□□□□ -0.56
LRRC40-201ENST00000370952 TPM3P06753 285 aa11.55□□□□□ -0.56
LRRC40-201ENST00000370952 CCDC192P0DO97 292 aa11.55□□□□□ -0.56
LRRC40-201ENST00000370952 DDX54Q8TDD1 881 aaKnown RBP11.55□□□□□ -0.56
LRRC40-201ENST00000370952 NECTIN2Q92692 538 aa11.55□□□□□ -0.56
LRRC40-201ENST00000370952 NCKAP5LQ9HCH0 1330 aa11.55□□□□□ -0.56
LRRC40-201ENST00000370952 SSH2Q76I76 1423 aa11.55□□□□□ -0.56
LRRC40-201ENST00000370952 TNNT1P13805 278 aa11.55□□□□□ -0.56
LRRC40-201ENST00000370952 GJB2P29033 226 aa11.55□□□□□ -0.56
LRRC40-201ENST00000370952 HAP1P54257 671 aaPredicted RBP11.55□□□□□ -0.56
LRRC40-201ENST00000370952 FAM173BQ6P4H8 233 aa11.55□□□□□ -0.56
LRRC40-201ENST00000370952 CKAP2LQ8IYA6 745 aa11.55□□□□□ -0.56
LRRC40-201ENST00000370952 TTC14Q96N46 770 aa11.55□□□□□ -0.56
LRRC40-201ENST00000370952 ASXL2Q76L83 1435 aa11.55□□□□□ -0.56
LRRC40-201ENST00000370952 CDK12Q9NYV4 1490 aaPredicted RBP11.55□□□□□ -0.56
LRRC40-201ENST00000370952 ZNF592Q92610 1267 aa11.54□□□□□ -0.56
LRRC40-201ENST00000370952 MTMR6Q9Y217 621 aa11.54□□□□□ -0.56
LRRC40-201ENST00000370952 CCT4P50991 539 aaKnown RBP11.54□□□□□ -0.56
LRRC40-201ENST00000370952 FERMT3Q86UX7 667 aa11.54□□□□□ -0.56
LRRC40-201ENST00000370952 LIMCH1Q9UPQ0 1083 aa11.54□□□□□ -0.56
LRRC40-201ENST00000370952 SPG7Q9UQ90 795 aa11.54□□□□□ -0.56
LRRC40-201ENST00000370952 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.54□□□□□ -0.56
LRRC40-201ENST00000370952 LIG1P18858 919 aa11.53□□□□□ -0.56
LRRC40-201ENST00000370952 FAM200AQ8TCP9 573 aa11.53□□□□□ -0.56
LRRC40-201ENST00000370952 COG3Q96JB2 828 aa11.53□□□□□ -0.56
LRRC40-201ENST00000370952 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.53□□□□□ -0.56
LRRC40-201ENST00000370952 ATP6V1DQ9Y5K8 247 aa11.53□□□□□ -0.56
LRRC40-201ENST00000370952 MRVI1Q9Y6F6 885 aa11.53□□□□□ -0.56
LRRC40-201ENST00000370952 V9GYY5 206 aaPredicted RBP11.53□□□□□ -0.56
LRRC40-201ENST00000370952 SMTNL1A8MU46 457 aa11.53□□□□□ -0.56
LRRC40-201ENST00000370952 CASTP20810 708 aaKnown RBP11.53□□□□□ -0.56
LRRC40-201ENST00000370952 LRRFIP2Q9Y608 721 aaKnown RBP11.53□□□□□ -0.56
LRRC40-201ENST00000370952 RAD50Q92878 1312 aa11.53□□□□□ -0.56
LRRC40-201ENST00000370952 FOXO3O43524 673 aa11.53□□□□□ -0.56
LRRC40-201ENST00000370952 TYRO3Q06418 890 aa11.53□□□□□ -0.56
LRRC40-201ENST00000370952 TTC6Q86TZ1 520 aa11.53□□□□□ -0.56
LRRC40-201ENST00000370952 TRIM5Q9C035 493 aa11.53□□□□□ -0.56
LRRC40-201ENST00000370952 TMEM51Q9NW97 253 aa11.53□□□□□ -0.56
LRRC40-201ENST00000370952 CWC27Q6UX04 472 aaKnown RBP11.52□□□□□ -0.57
LRRC40-201ENST00000370952 NECAB1Q8N987 351 aa11.52□□□□□ -0.57
LRRC40-201ENST00000370952 IL17RAQ96F46 866 aa11.52□□□□□ -0.57
LRRC40-201ENST00000370952 STAP2Q9UGK3 403 aa11.52□□□□□ -0.57
LRRC40-201ENST00000370952 VGLL3A8MV65 326 aa11.52□□□□□ -0.57
LRRC40-201ENST00000370952 SLFN14P0C7P3 912 aa11.52□□□□□ -0.57
LRRC40-201ENST00000370952 ATP8B2P98198 1209 aa11.52□□□□□ -0.57
LRRC40-201ENST00000370952 EIF4A2Q14240 407 aaKnown RBP11.52□□□□□ -0.57
LRRC40-201ENST00000370952 MAP3K11Q16584 847 aa11.52□□□□□ -0.57
LRRC40-201ENST00000370952 TPD52L1Q16890 204 aaPredicted RBP11.52□□□□□ -0.57
LRRC40-201ENST00000370952 ANO6Q4KMQ2 910 aa11.52□□□□□ -0.57
LRRC40-201ENST00000370952 CCDC112Q8NEF3 446 aa11.52□□□□□ -0.57
LRRC40-201ENST00000370952 NUP62CLQ9H1M0 184 aa11.52□□□□□ -0.57
LRRC40-201ENST00000370952 CBX8Q9HC52 389 aa11.52□□□□□ -0.57
LRRC40-201ENST00000370952 TSPYL4Q9UJ04 414 aa11.52□□□□□ -0.57
LRRC40-201ENST00000370952 DDX41Q9UJV9 622 aaKnown RBP11.52□□□□□ -0.57
LRRC40-201ENST00000370952 SGSM2O43147 1006 aa11.51□□□□□ -0.57
LRRC40-201ENST00000370952 ZSCAN25Q6NSZ9 544 aa11.51□□□□□ -0.57
LRRC40-201ENST00000370952 LSG1Q9H089 658 aaKnown RBP11.51□□□□□ -0.57
LRRC40-201ENST00000370952 SOX12O15370 315 aa11.51□□□□□ -0.57
LRRC40-201ENST00000370952 RTF1Q92541 710 aaKnown RBP11.51□□□□□ -0.57
LRRC40-201ENST00000370952 ATP7BP35670 1465 aa11.5□□□□□ -0.57
LRRC40-201ENST00000370952 CACTINQ8WUQ7 758 aaKnown RBP11.5□□□□□ -0.57
LRRC40-201ENST00000370952 GABPB1Q06547 395 aaPredicted RBP11.5□□□□□ -0.57
LRRC40-201ENST00000370952 ADCK5Q3MIX3 580 aa11.5□□□□□ -0.57
LRRC40-201ENST00000370952 CCDC144BQ3MJ40 725 aa11.5□□□□□ -0.57
LRRC40-201ENST00000370952 CCDC144CPQ8IYA2 1237 aa11.5□□□□□ -0.57
LRRC40-201ENST00000370952 KIF18AQ8NI77 898 aa11.5□□□□□ -0.57
LRRC40-201ENST00000370952 HYPKQ9NX55 129 aa11.5□□□□□ -0.57
LRRC40-201ENST00000370952 DACT1Q9NYF0 836 aa11.5□□□□□ -0.57
LRRC40-201ENST00000370952 CPS1P31327 1500 aa11.5□□□□□ -0.57
LRRC40-201ENST00000370952 PREX1Q8TCU6 1659 aa11.5□□□□□ -0.57
LRRC40-201ENST00000370952 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.5□□□□□ -0.57
LRRC40-201ENST00000370952 ZNF75DP51815 510 aa11.5□□□□□ -0.57
LRRC40-201ENST00000370952 ST3GAL1Q11201 340 aa11.5□□□□□ -0.57
LRRC40-201ENST00000370952 JAKMIP1Q96N16 626 aaKnown RBP11.5□□□□□ -0.57
LRRC40-201ENST00000370952 TNMDQ9H2S6 317 aa11.5□□□□□ -0.57
LRRC40-201ENST00000370952 ERICH4A6NGS2 130 aa11.49□□□□□ -0.57
LRRC40-201ENST00000370952 GNAI3P08754 354 aa11.49□□□□□ -0.57
LRRC40-201ENST00000370952 ARID5BQ14865 1188 aa11.49□□□□□ -0.57
LRRC40-201ENST00000370952 TFIP11Q9UBB9 837 aaKnown RBP11.49□□□□□ -0.57
LRRC40-201ENST00000370952 EDC4Q6P2E9 1401 aaKnown RBP11.49□□□□□ -0.57
LRRC40-201ENST00000370952 USP27XA6NNY8 438 aa11.49□□□□□ -0.57
LRRC40-201ENST00000370952 SURF6O75683 361 aaKnown RBP11.49□□□□□ -0.57
LRRC40-201ENST00000370952 FLIIQ13045 1269 aa11.49□□□□□ -0.57
LRRC40-201ENST00000370952 MAPK8IP2Q13387 824 aaPredicted RBP11.49□□□□□ -0.57
LRRC40-201ENST00000370952 CDC37L1Q7L3B6 337 aa11.49□□□□□ -0.57
LRRC40-201ENST00000370952 PI4K2BQ8TCG2 481 aa11.49□□□□□ -0.57
LRRC40-201ENST00000370952 STK31Q9BXU1 1019 aa11.49□□□□□ -0.57
LRRC40-201ENST00000370952 ALKQ9UM73 1620 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 NPHP1O15259 732 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 KCNJ4P48050 445 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 SYCP1Q15431 976 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 KMT5BQ4FZB7 885 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 TAF3Q5VWG9 929 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 PRPF40BQ6NWY9 871 aaKnown RBP11.48□□□□□ -0.57
LRRC40-201ENST00000370952 DNAJC25Q9H1X3 360 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 ST7Q9NRC1 585 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms