RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 ARFGEF1Q9Y6D6 1849 aa14.07□□□□□ -0.16
EXOSC1-203ENST00000370886 ERVV-2B6SEH9 535 aa14.07□□□□□ -0.16
EXOSC1-203ENST00000370886 TMPOP42166 694 aaKnown RBP14.07□□□□□ -0.16
EXOSC1-203ENST00000370886 TEFQ10587 303 aa14.07□□□□□ -0.16
EXOSC1-203ENST00000370886 COL13A1Q5TAT6 717 aaPredicted RBP14.07□□□□□ -0.16
EXOSC1-203ENST00000370886 SMIM5Q71RC9 77 aa14.07□□□□□ -0.16
EXOSC1-203ENST00000370886 IL17REQ8NFR9 667 aa14.07□□□□□ -0.16
EXOSC1-203ENST00000370886 THUMPD2Q9BTF0 503 aaKnown RBP14.07□□□□□ -0.16
EXOSC1-203ENST00000370886 TNS4Q8IZW8 715 aa14.06□□□□□ -0.16
EXOSC1-203ENST00000370886 CCDC87Q9NVE4 849 aa14.06□□□□□ -0.16
EXOSC1-203ENST00000370886 KDM2BQ8NHM5 1336 aa14.06□□□□□ -0.16
EXOSC1-203ENST00000370886 KDM6AO15550 1401 aaPredicted RBP14.06□□□□□ -0.16
EXOSC1-203ENST00000370886 TNRC6CQ9HCJ0 1690 aaKnown RBP14.05□□□□□ -0.16
EXOSC1-203ENST00000370886 CAPN15O75808 1086 aa14.05□□□□□ -0.16
EXOSC1-203ENST00000370886 ATP6V1AP38606 617 aa14.05□□□□□ -0.16
EXOSC1-203ENST00000370886 NLGN1Q8N2Q7 840 aa14.05□□□□□ -0.16
EXOSC1-203ENST00000370886 C4AP0C0L4 1744 aa14.04□□□□□ -0.16
EXOSC1-203ENST00000370886 A0A0G2JLW4 131 aa14.04□□□□□ -0.16
EXOSC1-203ENST00000370886 C9orf131Q5VYM1 1079 aa14.04□□□□□ -0.16
EXOSC1-203ENST00000370886 SLC52A2Q9HAB3 445 aa14.04□□□□□ -0.16
EXOSC1-203ENST00000370886 ASAP1Q9ULH1 1129 aa14.04□□□□□ -0.16
EXOSC1-203ENST00000370886 RTCBQ9Y3I0 505 aaKnown RBP14.04□□□□□ -0.16
EXOSC1-203ENST00000370886 HTATSF1O43719 755 aaKnown RBP14.03□□□□□ -0.16
EXOSC1-203ENST00000370886 ADRA2BP18089 450 aa14.03□□□□□ -0.16
EXOSC1-203ENST00000370886 PRELPP51888 382 aa14.03□□□□□ -0.16
EXOSC1-203ENST00000370886 LMOD3Q0VAK6 560 aa14.03□□□□□ -0.16
EXOSC1-203ENST00000370886 SLC39A6Q13433 755 aa14.03□□□□□ -0.16
EXOSC1-203ENST00000370886 ITPK1Q13572 414 aa14.03□□□□□ -0.16
EXOSC1-203ENST00000370886 TRAPPC3LQ5T215 181 aa14.03□□□□□ -0.16
EXOSC1-203ENST00000370886 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
EXOSC1-203ENST00000370886 LAS1LQ9Y4W2 734 aaKnown RBP14.03□□□□□ -0.16
EXOSC1-203ENST00000370886 ZNF831Q5JPB2 1677 aa14.02□□□□□ -0.16
EXOSC1-203ENST00000370886 PTCD1O75127 700 aaKnown RBP14.02□□□□□ -0.17
EXOSC1-203ENST00000370886 DPEP1P16444 411 aa14.02□□□□□ -0.17
EXOSC1-203ENST00000370886 HTRA3P83110 453 aa14.02□□□□□ -0.17
EXOSC1-203ENST00000370886 ATG3Q9NT62 314 aa14.02□□□□□ -0.17
EXOSC1-203ENST00000370886 MIS18AQ9NYP9 233 aa14.02□□□□□ -0.17
EXOSC1-203ENST00000370886 PARP3Q9Y6F1 533 aa14.02□□□□□ -0.17
EXOSC1-203ENST00000370886 PCNTO95613 3336 aa14.02□□□□□ -0.17
EXOSC1-203ENST00000370886 KCPQ6ZWJ8 1503 aa14.01□□□□□ -0.17
EXOSC1-203ENST00000370886 BTBD11A6QL63 1104 aa14.01□□□□□ -0.17
EXOSC1-203ENST00000370886 TTC5Q8N0Z6 440 aa14□□□□□ -0.17
EXOSC1-203ENST00000370886 SMC1BQ8NDV3 1235 aa14□□□□□ -0.17
EXOSC1-203ENST00000370886 RNF181Q9P0P0 153 aa14□□□□□ -0.17
EXOSC1-203ENST00000370886 TRIM35Q9UPQ4 493 aa14□□□□□ -0.17
EXOSC1-203ENST00000370886 COL5A3P25940 1745 aaPredicted RBP13.99□□□□□ -0.17
EXOSC1-203ENST00000370886 RFC4P35249 363 aa13.99□□□□□ -0.17
EXOSC1-203ENST00000370886 TAF7Q15545 349 aaPredicted RBP13.99□□□□□ -0.17
EXOSC1-203ENST00000370886 PIM2Q9P1W9 311 aa13.99□□□□□ -0.17
EXOSC1-203ENST00000370886 CNTNAP4Q9C0A0 1308 aa13.98□□□□□ -0.17
EXOSC1-203ENST00000370886 SBF1O95248 1867 aa13.98□□□□□ -0.17
EXOSC1-203ENST00000370886 KCNQ3O43525 872 aa13.98□□□□□ -0.17
EXOSC1-203ENST00000370886 GYS1P13807 737 aa13.98□□□□□ -0.17
EXOSC1-203ENST00000370886 RC3H1Q5TC82 1133 aaKnown RBP13.98□□□□□ -0.17
EXOSC1-203ENST00000370886 ZC3H4Q9UPT8 1303 aaKnown RBP13.97□□□□□ -0.17
EXOSC1-203ENST00000370886 DALRD3Q5D0E6 543 aaKnown RBP13.97□□□□□ -0.17
EXOSC1-203ENST00000370886 ARHGEF1Q92888 912 aaKnown RBP13.97□□□□□ -0.17
EXOSC1-203ENST00000370886 RRAGCQ9HB90 399 aa13.97□□□□□ -0.17
EXOSC1-203ENST00000370886 CEMIPQ8WUJ3 1361 aa13.96□□□□□ -0.17
EXOSC1-203ENST00000370886 KCNA3P22001 575 aa13.96□□□□□ -0.17
EXOSC1-203ENST00000370886 ZNF790Q6PG37 636 aa13.96□□□□□ -0.17
EXOSC1-203ENST00000370886 TSPYL4Q9UJ04 414 aa13.96□□□□□ -0.17
EXOSC1-203ENST00000370886 MYH14Q7Z406 1995 aaKnown RBP13.95□□□□□ -0.18
EXOSC1-203ENST00000370886 RPS6KA4O75676 772 aa13.95□□□□□ -0.18
EXOSC1-203ENST00000370886 HSPA1AP0DMV8 641 aaKnown RBP13.95□□□□□ -0.18
EXOSC1-203ENST00000370886 HSPA1BP0DMV9 641 aaKnown RBP13.95□□□□□ -0.18
EXOSC1-203ENST00000370886 CALD1Q05682 793 aaKnown RBP13.94□□□□□ -0.18
EXOSC1-203ENST00000370886 WWC1Q8IX03 1113 aa13.94□□□□□ -0.18
EXOSC1-203ENST00000370886 ZNF496Q96IT1 587 aaPredicted RBP13.94□□□□□ -0.18
EXOSC1-203ENST00000370886 FMNL2Q96PY5 1086 aa13.93□□□□□ -0.18
EXOSC1-203ENST00000370886 SLC4A9Q96Q91 983 aa13.93□□□□□ -0.18
EXOSC1-203ENST00000370886 HNRNPUQ00839 825 aaKnown RBP eCLIP13.92□□□□□ -0.18
EXOSC1-203ENST00000370886 DNAJC10Q8IXB1 793 aa13.92□□□□□ -0.18
EXOSC1-203ENST00000370886 VEGFAP15692 232 aaPredicted RBP13.91□□□□□ -0.18
EXOSC1-203ENST00000370886 GNAI1P63096 354 aa13.91□□□□□ -0.18
EXOSC1-203ENST00000370886 CCDC27Q2M243 656 aa13.91□□□□□ -0.18
EXOSC1-203ENST00000370886 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.18
EXOSC1-203ENST00000370886 CHL1O00533 1208 aa13.9□□□□□ -0.18
EXOSC1-203ENST00000370886 TSR2Q969E8 191 aaKnown RBP13.9□□□□□ -0.18
EXOSC1-203ENST00000370886 CFAP44Q96MT7 982 aa13.9□□□□□ -0.18
EXOSC1-203ENST00000370886 MRC1P22897 1456 aa13.9□□□□□ -0.18
EXOSC1-203ENST00000370886 TIAM2Q8IVF5 1701 aa13.9□□□□□ -0.18
EXOSC1-203ENST00000370886 PRAMEF22A3QJZ6 481 aa13.89□□□□□ -0.19
EXOSC1-203ENST00000370886 GLTPD2A6NH11 291 aa13.89□□□□□ -0.19
EXOSC1-203ENST00000370886 SNRPA1P09661 255 aaKnown RBP13.89□□□□□ -0.19
EXOSC1-203ENST00000370886 LMNB1P20700 586 aa13.89□□□□□ -0.19
EXOSC1-203ENST00000370886 CHRNA5P30532 468 aa13.89□□□□□ -0.19
EXOSC1-203ENST00000370886 EIF4A1P60842 406 aaKnown RBP13.89□□□□□ -0.19
EXOSC1-203ENST00000370886 MBIPQ9NS73 344 aa13.89□□□□□ -0.19
EXOSC1-203ENST00000370886 IFT57Q9NWB7 429 aa13.89□□□□□ -0.19
EXOSC1-203ENST00000370886 HEG1Q9ULI3 1381 aa13.88□□□□□ -0.19
EXOSC1-203ENST00000370886 ELL2O00472 640 aaPredicted RBP13.88□□□□□ -0.19
EXOSC1-203ENST00000370886 STARD3NLO95772 234 aa13.88□□□□□ -0.19
EXOSC1-203ENST00000370886 CRKLP46109 303 aaKnown RBP13.88□□□□□ -0.19
EXOSC1-203ENST00000370886 DDR1Q08345 913 aa13.88□□□□□ -0.19
EXOSC1-203ENST00000370886 FKBP8Q14318 412 aa13.88□□□□□ -0.19
EXOSC1-203ENST00000370886 KRT24Q2M2I5 525 aa13.88□□□□□ -0.19
EXOSC1-203ENST00000370886 WDR63Q8IWG1 891 aa13.88□□□□□ -0.19
EXOSC1-203ENST00000370886 ZNF330Q9Y3S2 320 aaPredicted RBP13.88□□□□□ -0.19
EXOSC1-203ENST00000370886 CCDC88AQ3V6T2 1871 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms