RNA–Protein interactions for RNA: ENST00000370558.8

SH3GLB1-201, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GLB1, Length 6,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-201ENST00000370558 GOPCQ9HD26 462 aa12.84□□□□□ -0.35
SH3GLB1-201ENST00000370558 KIF5CO60282 957 aa12.83□□□□□ -0.35
SH3GLB1-201ENST00000370558 ADAMTS2O95450 1211 aa12.83□□□□□ -0.35
SH3GLB1-201ENST00000370558 SSRP1Q08945 709 aaKnown RBP12.83□□□□□ -0.35
SH3GLB1-201ENST00000370558 NBPF8Q3BBV2 869 aa12.83□□□□□ -0.35
SH3GLB1-201ENST00000370558 CCDC8Q9H0W5 538 aaPredicted RBP12.83□□□□□ -0.35
SH3GLB1-201ENST00000370558 CFTRP13569 1480 aa12.83□□□□□ -0.36
SH3GLB1-201ENST00000370558 NSD3Q9BZ95 1437 aa12.83□□□□□ -0.36
SH3GLB1-201ENST00000370558 GOLGA6L10A0A0M3HER8 536 aa12.83□□□□□ -0.36
SH3GLB1-201ENST00000370558 TAF7Q15545 349 aaPredicted RBP12.83□□□□□ -0.36
SH3GLB1-201ENST00000370558 ANKRD18BA2A2Z9 1011 aa12.83□□□□□ -0.36
SH3GLB1-201ENST00000370558 CASQ1P31415 396 aa12.83□□□□□ -0.36
SH3GLB1-201ENST00000370558 USP8P40818 1118 aa12.83□□□□□ -0.36
SH3GLB1-201ENST00000370558 RNF41Q9H4P4 317 aaPredicted RBP12.83□□□□□ -0.36
SH3GLB1-201ENST00000370558 GOLGA8AA7E2F4 631 aa12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 GOLGA8BA8MQT2 603 aa12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 KIF20AO95235 890 aa12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 TOP1P11387 765 aaKnown RBP12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 HOOK3Q86VS8 718 aa12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 KIF21BO75037 1637 aa12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 IFIT3O14879 490 aaKnown RBP12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 TDRD12Q587J7 1177 aaKnown RBP12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 HMGB1P09429 215 aaKnown RBP12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 IFFO1Q0D2I5 559 aa12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 KIF4BQ2VIQ3 1234 aa12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 BAG4O95429 457 aaKnown RBP12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 TMCO3Q6UWJ1 677 aa12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 GRIN2BQ13224 1484 aa12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 STAMBPO95630 424 aa12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 PTPN14Q15678 1187 aa12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 FERMT2Q96AC1 680 aa12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 SCAND2PQ9GZW5 306 aaPredicted RBP12.82□□□□□ -0.36
SH3GLB1-201ENST00000370558 ERICH4A6NGS2 130 aa12.81□□□□□ -0.36
SH3GLB1-201ENST00000370558 TNNT1P13805 278 aa12.81□□□□□ -0.36
SH3GLB1-201ENST00000370558 C6orf229H3BNL8 230 aa12.81□□□□□ -0.36
SH3GLB1-201ENST00000370558 CTNNA2P26232 953 aa12.81□□□□□ -0.36
SH3GLB1-201ENST00000370558 TRMT1LQ7Z2T5 733 aaKnown RBP12.81□□□□□ -0.36
SH3GLB1-201ENST00000370558 CATIPQ7Z7H3 387 aa12.81□□□□□ -0.36
SH3GLB1-201ENST00000370558 NUP88Q99567 741 aaPredicted RBP12.81□□□□□ -0.36
SH3GLB1-201ENST00000370558 SH2B1Q9NRF2 756 aaPredicted RBP12.81□□□□□ -0.36
SH3GLB1-201ENST00000370558 KIF2AO00139 706 aaPredicted RBP12.81□□□□□ -0.36
SH3GLB1-201ENST00000370558 USO1O60763 962 aaKnown RBP12.81□□□□□ -0.36
SH3GLB1-201ENST00000370558 FEZ1Q99689 392 aa12.81□□□□□ -0.36
SH3GLB1-201ENST00000370558 MAP9Q49MG5 647 aa12.8□□□□□ -0.36
SH3GLB1-201ENST00000370558 CNNM3Q8NE01 707 aa12.8□□□□□ -0.36
SH3GLB1-201ENST00000370558 CPLX3Q8WVH0 158 aa12.8□□□□□ -0.36
SH3GLB1-201ENST00000370558 COMMD10Q9Y6G5 202 aa12.8□□□□□ -0.36
SH3GLB1-201ENST00000370558 A0A087WZG4 1122 aa12.8□□□□□ -0.36
SH3GLB1-201ENST00000370558 SHTN1A0MZ66 631 aa12.8□□□□□ -0.36
SH3GLB1-201ENST00000370558 SLFN5Q08AF3 891 aa12.8□□□□□ -0.36
SH3GLB1-201ENST00000370558 URI1O94763 535 aaPredicted RBP12.8□□□□□ -0.36
SH3GLB1-201ENST00000370558 WAPLQ7Z5K2 1190 aa12.8□□□□□ -0.36
SH3GLB1-201ENST00000370558 CCDC183Q5T5S1 534 aa12.8□□□□□ -0.36
SH3GLB1-201ENST00000370558 GPTP24298 496 aa12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 PAFAH1B1P43034 410 aa12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 CETN1Q12798 172 aa12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 SPTY2D1Q68D10 685 aaPredicted RBP12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 YEATS4O95619 227 aa12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 BCCIPQ9P287 314 aaKnown RBP eCLIP12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 MTIF2P46199 727 aaKnown RBP12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 CCT2P78371 535 aaKnown RBP12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 UBE4AQ14139 1066 aa12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 DNAAF4Q8WXU2 420 aa12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 DRC1Q96MC2 740 aa12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 PRKCSHP14314 528 aaPredicted RBP12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 VAT1LQ9HCJ6 419 aa12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 F6X3S4 739 aa12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 GCOM1H8Y6P7 765 aaPredicted RBP12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 MYZAPP0CAP1 466 aa12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 PDCL2Q8N4E4 241 aa12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 CALML4Q96GE6 196 aa12.79□□□□□ -0.36
SH3GLB1-201ENST00000370558 TCERG1LQ5VWI1 586 aa12.78□□□□□ -0.36
SH3GLB1-201ENST00000370558 ESPNB1AK53 854 aa12.78□□□□□ -0.36
SH3GLB1-201ENST00000370558 CCDC40Q4G0X9 1142 aa12.78□□□□□ -0.36
SH3GLB1-201ENST00000370558 MCM3P25205 808 aa12.78□□□□□ -0.36
SH3GLB1-201ENST00000370558 HYPKQ9NX55 129 aa12.78□□□□□ -0.36
SH3GLB1-201ENST00000370558 NF2P35240 595 aa12.78□□□□□ -0.36
SH3GLB1-201ENST00000370558 CCDC12Q8WUD4 166 aaPredicted RBP12.78□□□□□ -0.36
SH3GLB1-201ENST00000370558 NGLY1Q96IV0 654 aa12.78□□□□□ -0.36
SH3GLB1-201ENST00000370558 CLIP2Q9UDT6 1046 aa12.78□□□□□ -0.36
SH3GLB1-201ENST00000370558 IL27Q8NEV9 243 aa12.77□□□□□ -0.36
SH3GLB1-201ENST00000370558 KIF18AQ8NI77 898 aa12.77□□□□□ -0.36
SH3GLB1-201ENST00000370558 TMX1Q9H3N1 280 aa12.77□□□□□ -0.36
SH3GLB1-201ENST00000370558 ZBTB3Q9H5J0 574 aa12.77□□□□□ -0.36
SH3GLB1-201ENST00000370558 CABP5Q9NP86 173 aa12.77□□□□□ -0.36
SH3GLB1-201ENST00000370558 IDEP14735 1019 aa12.77□□□□□ -0.36
SH3GLB1-201ENST00000370558 EXOC5O00471 708 aa12.77□□□□□ -0.37
SH3GLB1-201ENST00000370558 AMPD3Q01432 767 aa12.77□□□□□ -0.37
SH3GLB1-201ENST00000370558 SMC1AQ14683 1233 aaKnown RBP12.77□□□□□ -0.37
SH3GLB1-201ENST00000370558 PSMD1Q99460 953 aa12.77□□□□□ -0.37
SH3GLB1-201ENST00000370558 TCP11L1Q9NUJ3 509 aa12.77□□□□□ -0.37
SH3GLB1-201ENST00000370558 TMCO5BA8MYB1 307 aa12.77□□□□□ -0.37
SH3GLB1-201ENST00000370558 ALDH1L2Q3SY69 923 aa12.77□□□□□ -0.37
SH3GLB1-201ENST00000370558 SAMM50Q9Y512 469 aa12.77□□□□□ -0.37
SH3GLB1-201ENST00000370558 CTAGE5O15320 804 aa12.77□□□□□ -0.37
SH3GLB1-201ENST00000370558 LDHCP07864 332 aa12.77□□□□□ -0.37
SH3GLB1-201ENST00000370558 CCDC144CPQ8IYA2 1237 aa12.77□□□□□ -0.37
SH3GLB1-201ENST00000370558 FSIP1Q8NA03 581 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms