RNA–Protein interactions for RNA: ENST00000370367.3

KHDC3L-201, Transcript of KH domain containing 3 like, subcortical maternal complex member, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KHDC3L, Length 1,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3L-201ENST00000370367 PELP1Q8IZL8 1130 aaKnown RBP27.66■■■□□ 2.02
KHDC3L-201ENST00000370367 SRP68Q9UHB9 627 aaKnown RBP27.66■■■□□ 2.02
KHDC3L-201ENST00000370367 PARP3Q9Y6F1 533 aa27.66■■■□□ 2.02
KHDC3L-201ENST00000370367 MAPK8IP3Q9UPT6 1336 aa27.66■■■□□ 2.02
KHDC3L-201ENST00000370367 NFE2L2Q16236 605 aa27.65■■■□□ 2.02
KHDC3L-201ENST00000370367 NARFQ9UHQ1 456 aa27.65■■■□□ 2.02
KHDC3L-201ENST00000370367 C10orf71Q711Q0 1435 aa27.65■■■□□ 2.02
KHDC3L-201ENST00000370367 FKBP8Q14318 412 aa27.64■■■□□ 2.02
KHDC3L-201ENST00000370367 YBX3P16989 372 aaKnown RBP eCLIP27.63■■■□□ 2.01
KHDC3L-201ENST00000370367 EIF5P55010 431 aaKnown RBP27.63■■■□□ 2.01
KHDC3L-201ENST00000370367 TGFB2P61812 414 aa27.63■■■□□ 2.01
KHDC3L-201ENST00000370367 DCTN1Q14203 1278 aa27.63■■■□□ 2.01
KHDC3L-201ENST00000370367 A0A087WZG4 1122 aa27.62■■■□□ 2.01
KHDC3L-201ENST00000370367 TAF7Q15545 349 aaPredicted RBP27.62■■■□□ 2.01
KHDC3L-201ENST00000370367 KCNQ3O43525 872 aa27.61■■■□□ 2.01
KHDC3L-201ENST00000370367 CANXP27824 592 aaKnown RBP27.61■■■□□ 2.01
KHDC3L-201ENST00000370367 USPL1Q5W0Q7 1092 aa27.61■■■□□ 2.01
KHDC3L-201ENST00000370367 PNISRQ8TF01 805 aaKnown RBP27.61■■■□□ 2.01
KHDC3L-201ENST00000370367 IL6STP40189 918 aaPredicted RBP27.6■■■□□ 2.01
KHDC3L-201ENST00000370367 PRKRIP1Q9H875 184 aaPredicted RBP27.6■■■□□ 2.01
KHDC3L-201ENST00000370367 SNRPA1P09661 255 aaKnown RBP27.59■■■□□ 2.01
KHDC3L-201ENST00000370367 TM4SF1P30408 202 aa27.59■■■□□ 2.01
KHDC3L-201ENST00000370367 PXDNLA1KZ92 1463 aa27.58■■■□□ 2.01
KHDC3L-201ENST00000370367 KIF13BQ9NQT8 1826 aa27.58■■■□□ 2.01
KHDC3L-201ENST00000370367 DDR1Q08345 913 aa27.58■■■□□ 2.01
KHDC3L-201ENST00000370367 POLRMTO00411 1230 aaKnown RBP27.57■■■□□ 2
KHDC3L-201ENST00000370367 CHD4Q14839 1912 aa27.55■■■□□ 2
KHDC3L-201ENST00000370367 BCL2L12Q9HB09 334 aa27.55■■■□□ 2
KHDC3L-201ENST00000370367 NPM2Q86SE8 214 aaKnown RBP27.54■■■□□ 2
KHDC3L-201ENST00000370367 A1BGP04217 495 aa27.53■■■□□ 2
KHDC3L-201ENST00000370367 NFIXQ14938 502 aa27.53■■■□□ 2
KHDC3L-201ENST00000370367 USP16Q9Y5T5 823 aa27.53■■■□□ 2
KHDC3L-201ENST00000370367 LMOD3Q0VAK6 560 aa27.52■■■□□ 2
KHDC3L-201ENST00000370367 WDR43Q15061 677 aaKnown RBP eCLIP27.52■■■□□ 2
KHDC3L-201ENST00000370367 ZNF784Q8NCA9 323 aaPredicted RBP27.51■■□□□ 1.99
KHDC3L-201ENST00000370367 RIPK4P57078 832 aa27.5■■□□□ 1.99
KHDC3L-201ENST00000370367 A0A0G2JLW4 131 aa27.49■■□□□ 1.99
KHDC3L-201ENST00000370367 DPEP1P16444 411 aa27.49■■□□□ 1.99
KHDC3L-201ENST00000370367 TMPOP42166 694 aaKnown RBP27.49■■□□□ 1.99
KHDC3L-201ENST00000370367 KIAA1551Q9HCM1 1747 aa27.49■■□□□ 1.99
KHDC3L-201ENST00000370367 DLG5Q8TDM6 1919 aa27.49■■□□□ 1.99
KHDC3L-201ENST00000370367 PRAMEF22A3QJZ6 481 aa27.48■■□□□ 1.99
KHDC3L-201ENST00000370367 THUMPD2Q9BTF0 503 aaKnown RBP27.48■■□□□ 1.99
KHDC3L-201ENST00000370367 BABAM1Q9NWV8 329 aa27.48■■□□□ 1.99
KHDC3L-201ENST00000370367 MIS18AQ9NYP9 233 aa27.48■■□□□ 1.99
KHDC3L-201ENST00000370367 ZNF330Q9Y3S2 320 aaPredicted RBP27.48■■□□□ 1.99
KHDC3L-201ENST00000370367 RGL2O15211 777 aa27.47■■□□□ 1.99
KHDC3L-201ENST00000370367 RUNDC1Q96C34 613 aa27.47■■□□□ 1.99
KHDC3L-201ENST00000370367 TBC1D2BQ9UPU7 963 aa27.47■■□□□ 1.99
KHDC3L-201ENST00000370367 CAMTA2O94983 1202 aa27.46■■□□□ 1.99
KHDC3L-201ENST00000370367 SERPINB2P05120 415 aa27.46■■□□□ 1.99
KHDC3L-201ENST00000370367 EIF4A1P60842 406 aaKnown RBP27.46■■□□□ 1.99
KHDC3L-201ENST00000370367 SCN7AQ01118 1682 aa27.46■■□□□ 1.99
KHDC3L-201ENST00000370367 GIGYF1O75420 1035 aaPredicted RBP27.45■■□□□ 1.98
KHDC3L-201ENST00000370367 DZIP3Q86Y13 1208 aaKnown RBP27.45■■□□□ 1.98
KHDC3L-201ENST00000370367 KCNA3P22001 575 aa27.44■■□□□ 1.98
KHDC3L-201ENST00000370367 PIM2Q9P1W9 311 aa27.44■■□□□ 1.98
KHDC3L-201ENST00000370367 WWC3Q9ULE0 1092 aa27.44■■□□□ 1.98
KHDC3L-201ENST00000370367 ADAMTS8Q9UP79 889 aa27.44■■□□□ 1.98
KHDC3L-201ENST00000370367 KDM3BQ7LBC6 1761 aa27.44■■□□□ 1.98
KHDC3L-201ENST00000370367 NRXN2Q9P2S2 1712 aa27.44■■□□□ 1.98
KHDC3L-201ENST00000370367 CLEC4GQ6UXB4 293 aa27.43■■□□□ 1.98
KHDC3L-201ENST00000370367 BCS1LQ9Y276 419 aa27.43■■□□□ 1.98
KHDC3L-201ENST00000370367 TBC1D9BQ66K14 1250 aa27.42■■□□□ 1.98
KHDC3L-201ENST00000370367 CARMIL3Q8ND23 1372 aa27.42■■□□□ 1.98
KHDC3L-201ENST00000370367 NBPF26B4DH59 902 aa27.41■■□□□ 1.98
KHDC3L-201ENST00000370367 NBPF10Q6P3W6 841 aaKnown RBP27.41■■□□□ 1.98
KHDC3L-201ENST00000370367 CCDC146Q8IYE0 955 aa27.41■■□□□ 1.98
KHDC3L-201ENST00000370367 NBPF15Q8N660 670 aa27.41■■□□□ 1.98
KHDC3L-201ENST00000370367 TSPYL4Q9UJ04 414 aa27.41■■□□□ 1.98
KHDC3L-201ENST00000370367 ZNF316A6NFI3 1004 aaPredicted RBP27.4■■□□□ 1.98
KHDC3L-201ENST00000370367 BICDL1Q6ZP65 573 aa27.4■■□□□ 1.98
KHDC3L-201ENST00000370367 ZNF652Q9Y2D9 606 aa27.4■■□□□ 1.98
KHDC3L-201ENST00000370367 N4BP2Q86UW6 1770 aaPredicted RBP27.4■■□□□ 1.98
KHDC3L-201ENST00000370367 PIP4K2AP48426 406 aaPredicted RBP27.39■■□□□ 1.98
KHDC3L-201ENST00000370367 LAMB4A4D0S4 1761 aa27.38■■□□□ 1.97
KHDC3L-201ENST00000370367 DALRD3Q5D0E6 543 aaKnown RBP27.38■■□□□ 1.97
KHDC3L-201ENST00000370367 SETDB2Q96T68 719 aa27.38■■□□□ 1.97
KHDC3L-201ENST00000370367 PDZRN3Q9UPQ7 1066 aa27.38■■□□□ 1.97
KHDC3L-201ENST00000370367 ERBB4Q15303 1308 aa27.38■■□□□ 1.97
KHDC3L-201ENST00000370367 ADCY9O60503 1353 aa27.37■■□□□ 1.97
KHDC3L-201ENST00000370367 RRP7AQ9Y3A4 280 aaKnown RBP27.37■■□□□ 1.97
KHDC3L-201ENST00000370367 CHRNA5P30532 468 aa27.36■■□□□ 1.97
KHDC3L-201ENST00000370367 BRCA1P38398 1863 aaKnown RBP27.36■■□□□ 1.97
KHDC3L-201ENST00000370367 BCORQ6W2J9 1755 aa27.35■■□□□ 1.97
KHDC3L-201ENST00000370367 AFDNP55196 1824 aaKnown RBP27.35■■□□□ 1.97
KHDC3L-201ENST00000370367 BRIP1Q9BX63 1249 aa27.35■■□□□ 1.97
KHDC3L-201ENST00000370367 TRIM35Q9UPQ4 493 aa27.35■■□□□ 1.97
KHDC3L-201ENST00000370367 NEUROD2Q15784 382 aa27.34■■□□□ 1.97
KHDC3L-201ENST00000370367 PRR5LQ6MZQ0 368 aa27.34■■□□□ 1.97
KHDC3L-201ENST00000370367 CNBD1Q8NA66 436 aa27.33■■□□□ 1.97
KHDC3L-201ENST00000370367 CHL1O00533 1208 aa27.32■■□□□ 1.96
KHDC3L-201ENST00000370367 PDE6BP35913 854 aa27.32■■□□□ 1.96
KHDC3L-201ENST00000370367 ATP10DQ9P241 1426 aa27.32■■□□□ 1.96
KHDC3L-201ENST00000370367 ERVV-1B6SEH8 477 aa27.31■■□□□ 1.96
KHDC3L-201ENST00000370367 H0YIN7 160 aa27.31■■□□□ 1.96
KHDC3L-201ENST00000370367 ARHGAP27Q6ZUM4 889 aa27.31■■□□□ 1.96
KHDC3L-201ENST00000370367 ST5P78524 1137 aa27.3■■□□□ 1.96
KHDC3L-201ENST00000370367 C2CD5Q86YS7 1000 aa27.3■■□□□ 1.96
KHDC3L-201ENST00000370367 ARFGEF1Q9Y6D6 1849 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms