RNA–Protein interactions for RNA: ENST00000370056.8

VAV3-202, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAV3, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-202ENST00000370056 CAGE1Q8TC20 777 aa25.38■■□□□ 1.65
VAV3-202ENST00000370056 IKQ13123 557 aaPredicted RBP25.37■■□□□ 1.65
VAV3-202ENST00000370056 RAI14Q9P0K7 980 aa25.37■■□□□ 1.65
VAV3-202ENST00000370056 SMTNL1A8MU46 457 aa25.37■■□□□ 1.65
VAV3-202ENST00000370056 ERCC4Q92889 916 aaPredicted RBP25.37■■□□□ 1.65
VAV3-202ENST00000370056 UQCRHLA0A096LP55 91 aa25.37■■□□□ 1.65
VAV3-202ENST00000370056 UQCRHP07919 91 aa25.37■■□□□ 1.65
VAV3-202ENST00000370056 FILIP1Q7Z7B0 1213 aa25.37■■□□□ 1.65
VAV3-202ENST00000370056 SETQ01105 290 aaPredicted RBP25.36■■□□□ 1.65
VAV3-202ENST00000370056 KLHL40Q2TBA0 621 aa25.36■■□□□ 1.65
VAV3-202ENST00000370056 STIM1Q13586 685 aa25.36■■□□□ 1.65
VAV3-202ENST00000370056 CAMK4Q16566 473 aa25.36■■□□□ 1.65
VAV3-202ENST00000370056 TNNQ9UQP3 1299 aa25.36■■□□□ 1.65
VAV3-202ENST00000370056 RHPN1Q8TCX5 695 aa25.35■■□□□ 1.65
VAV3-202ENST00000370056 RIMS2Q9UQ26 1411 aa25.35■■□□□ 1.65
VAV3-202ENST00000370056 SAMD1Q6SPF0 538 aaPredicted RBP25.35■■□□□ 1.65
VAV3-202ENST00000370056 PDE1AP54750 535 aa25.35■■□□□ 1.65
VAV3-202ENST00000370056 EIF4A2Q14240 407 aaKnown RBP25.35■■□□□ 1.65
VAV3-202ENST00000370056 TSHZ3Q63HK5 1081 aa25.35■■□□□ 1.65
VAV3-202ENST00000370056 ZFYVE9O95405 1425 aa25.35■■□□□ 1.65
VAV3-202ENST00000370056 VAMP4O75379 141 aa25.34■■□□□ 1.65
VAV3-202ENST00000370056 IFIT5Q13325 482 aaKnown RBP25.34■■□□□ 1.65
VAV3-202ENST00000370056 SNX21Q969T3 373 aa25.34■■□□□ 1.65
VAV3-202ENST00000370056 ZNHIT6Q9NWK9 470 aaKnown RBP25.34■■□□□ 1.65
VAV3-202ENST00000370056 STX6O43752 255 aa25.33■■□□□ 1.65
VAV3-202ENST00000370056 SMC5Q8IY18 1101 aa25.33■■□□□ 1.65
VAV3-202ENST00000370056 CCAR1Q8IX12 1150 aaKnown RBP25.33■■□□□ 1.65
VAV3-202ENST00000370056 IFNL2Q8IZJ0 200 aa25.33■■□□□ 1.65
VAV3-202ENST00000370056 SPINK5Q9NQ38 1064 aaPredicted RBP25.33■■□□□ 1.65
VAV3-202ENST00000370056 ZBTB40Q9NUA8 1239 aa25.33■■□□□ 1.65
VAV3-202ENST00000370056 A0A1W2PP64 1363 aa25.32■■□□□ 1.64
VAV3-202ENST00000370056 SAMD9Q5K651 1589 aa25.32■■□□□ 1.64
VAV3-202ENST00000370056 CDR1P51861 262 aa25.32■■□□□ 1.64
VAV3-202ENST00000370056 KRT28Q7Z3Y7 464 aa25.32■■□□□ 1.64
VAV3-202ENST00000370056 HSP90AB3PQ58FF7 597 aa25.31■■□□□ 1.64
VAV3-202ENST00000370056 ANO10Q9NW15 660 aa25.31■■□□□ 1.64
VAV3-202ENST00000370056 SOGA3Q5TF21 947 aa25.31■■□□□ 1.64
VAV3-202ENST00000370056 C8orf76Q96K31 380 aa25.31■■□□□ 1.64
VAV3-202ENST00000370056 TMX3Q96JJ7 454 aa25.3■■□□□ 1.64
VAV3-202ENST00000370056 INSRP06213 1382 aa25.3■■□□□ 1.64
VAV3-202ENST00000370056 CEP131Q9UPN4 1083 aa25.3■■□□□ 1.64
VAV3-202ENST00000370056 GJB2P29033 226 aa25.3■■□□□ 1.64
VAV3-202ENST00000370056 ANAPC15P60006 121 aa25.3■■□□□ 1.64
VAV3-202ENST00000370056 ABCF2Q9UG63 623 aa25.3■■□□□ 1.64
VAV3-202ENST00000370056 NPATQ14207 1427 aa25.3■■□□□ 1.64
VAV3-202ENST00000370056 ATP8B2P98198 1209 aa25.3■■□□□ 1.64
VAV3-202ENST00000370056 ANKRD24Q8TF21 1146 aa25.3■■□□□ 1.64
VAV3-202ENST00000370056 EIF4G3O43432 1585 aaKnown RBP25.29■■□□□ 1.64
VAV3-202ENST00000370056 DCTPP1Q9H773 170 aa25.29■■□□□ 1.64
VAV3-202ENST00000370056 HMG20BQ9P0W2 317 aa25.29■■□□□ 1.64
VAV3-202ENST00000370056 ANO8Q9HCE9 1232 aaPredicted RBP25.29■■□□□ 1.64
VAV3-202ENST00000370056 DDX19AQ9NUU7 478 aaKnown RBP25.29■■□□□ 1.64
VAV3-202ENST00000370056 CTAGE5O15320 804 aa25.28■■□□□ 1.64
VAV3-202ENST00000370056 NAPBQ9H115 298 aa25.28■■□□□ 1.64
VAV3-202ENST00000370056 GDPD2Q9HCC8 539 aa25.28■■□□□ 1.64
VAV3-202ENST00000370056 KRT18P05783 430 aaKnown RBP25.28■■□□□ 1.64
VAV3-202ENST00000370056 TSPYL6Q8N831 410 aa25.28■■□□□ 1.64
VAV3-202ENST00000370056 ESYT1Q9BSJ8 1104 aa25.28■■□□□ 1.64
VAV3-202ENST00000370056 ZRANB1Q9UGI0 708 aa25.28■■□□□ 1.64
VAV3-202ENST00000370056 CT47A1Q5JQC4 288 aaPredicted RBP25.27■■□□□ 1.64
VAV3-202ENST00000370056 LARP6Q9BRS8 491 aaKnown RBP25.27■■□□□ 1.64
VAV3-202ENST00000370056 CCDC196A0A1B0GTZ2 297 aa25.27■■□□□ 1.64
VAV3-202ENST00000370056 ANXA1P04083 346 aa25.27■■□□□ 1.64
VAV3-202ENST00000370056 NUTM2BA6NNL0 878 aaPredicted RBP25.27■■□□□ 1.64
VAV3-202ENST00000370056 NUTM2EB1AL46 878 aaPredicted RBP25.27■■□□□ 1.64
VAV3-202ENST00000370056 ZNF213O14771 459 aa25.27■■□□□ 1.64
VAV3-202ENST00000370056 UBE3BQ7Z3V4 1068 aa25.27■■□□□ 1.64
VAV3-202ENST00000370056 NUTM2AQ8IVF1 878 aaPredicted RBP25.27■■□□□ 1.64
VAV3-202ENST00000370056 ABCC1P33527 1531 aa25.27■■□□□ 1.64
VAV3-202ENST00000370056 MAST1Q9Y2H9 1570 aa25.27■■□□□ 1.64
VAV3-202ENST00000370056 ABCC2Q92887 1545 aa25.26■■□□□ 1.63
VAV3-202ENST00000370056 MAP3K12Q12852 859 aa25.26■■□□□ 1.63
VAV3-202ENST00000370056 CHPF2Q9P2E5 772 aa25.26■■□□□ 1.63
VAV3-202ENST00000370056 ZNF652Q9Y2D9 606 aa25.26■■□□□ 1.63
VAV3-202ENST00000370056 ABCA5Q8WWZ7 1642 aa25.26■■□□□ 1.63
VAV3-202ENST00000370056 SNRPA1P09661 255 aaKnown RBP25.26■■□□□ 1.63
VAV3-202ENST00000370056 PHACTR3Q96KR7 559 aa25.26■■□□□ 1.63
VAV3-202ENST00000370056 FLT4P35916 1363 aa25.26■■□□□ 1.63
VAV3-202ENST00000370056 ZMYM4Q5VZL5 1548 aa25.26■■□□□ 1.63
VAV3-202ENST00000370056 RNF123Q5XPI4 1314 aa25.26■■□□□ 1.63
VAV3-202ENST00000370056 ALDH1L1O75891 902 aa25.25■■□□□ 1.63
VAV3-202ENST00000370056 USP25Q9UHP3 1055 aa25.25■■□□□ 1.63
VAV3-202ENST00000370056 CFAP100Q494V2 611 aa25.25■■□□□ 1.63
VAV3-202ENST00000370056 ZBTB3Q9H5J0 574 aa25.25■■□□□ 1.63
VAV3-202ENST00000370056 CWC25Q9NXE8 425 aaPredicted RBP25.25■■□□□ 1.63
VAV3-202ENST00000370056 UBE2HP62256 183 aa25.24■■□□□ 1.63
VAV3-202ENST00000370056 ATP2B2Q01814 1243 aa25.24■■□□□ 1.63
VAV3-202ENST00000370056 TRMT112Q9UI30 125 aaKnown RBP25.24■■□□□ 1.63
VAV3-202ENST00000370056 MTHFSDQ2M296 383 aaKnown RBP25.24■■□□□ 1.63
VAV3-202ENST00000370056 ANKRD18BA2A2Z9 1011 aa25.24■■□□□ 1.63
VAV3-202ENST00000370056 GOLIM4O00461 696 aa25.24■■□□□ 1.63
VAV3-202ENST00000370056 RRP9O43818 475 aaKnown RBP25.24■■□□□ 1.63
VAV3-202ENST00000370056 KIF2AO00139 706 aaPredicted RBP25.23■■□□□ 1.63
VAV3-202ENST00000370056 CEP85Q6P2H3 762 aa25.23■■□□□ 1.63
VAV3-202ENST00000370056 NEK1Q96PY6 1258 aa25.23■■□□□ 1.63
VAV3-202ENST00000370056 SFPQP23246 707 aaKnown RBP eCLIP25.23■■□□□ 1.63
VAV3-202ENST00000370056 ANKRD13DQ6ZTN6 518 aa25.23■■□□□ 1.63
VAV3-202ENST00000370056 ATP5J2-PTCD1G3V325 749 aa25.23■■□□□ 1.63
VAV3-202ENST00000370056 LUC7LQ9NQ29 371 aaKnown RBP25.23■■□□□ 1.63
VAV3-202ENST00000370056 GUCY1B3Q02153 619 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms