RNA–Protein interactions for RNA: ENST00000369774.8

SH3PXD2A-203, Transcript of SH3 and PX domains 2A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SH3PXD2A, Length 11,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-203ENST00000369774 ZNF213O14771 459 aa15.14■□□□□ 0.01
SH3PXD2A-203ENST00000369774 SFPQP23246 707 aaKnown RBP eCLIP15.14■□□□□ 0.016e-7■■■■□ 19.6
SH3PXD2A-203ENST00000369774 HFM1A2PYH4 1435 aa15.14■□□□□ 0.01
SH3PXD2A-203ENST00000369774 MAP9Q49MG5 647 aa15.14■□□□□ 0.01
SH3PXD2A-203ENST00000369774 FCHSD2O94868 740 aa15.14■□□□□ 0.01
SH3PXD2A-203ENST00000369774 SPTY2D1Q68D10 685 aaPredicted RBP15.14■□□□□ 0.01
SH3PXD2A-203ENST00000369774 GRIPAP1Q4V328 841 aa15.14■□□□□ 0.01
SH3PXD2A-203ENST00000369774 NUDT16Q96DE0 195 aaKnown RBP15.14■□□□□ 0.01
SH3PXD2A-203ENST00000369774 TMCO3Q6UWJ1 677 aa15.13■□□□□ 0.01
SH3PXD2A-203ENST00000369774 NUP88Q99567 741 aaPredicted RBP15.13■□□□□ 0.01
SH3PXD2A-203ENST00000369774 IGF1RP08069 1367 aa15.13■□□□□ 0.01
SH3PXD2A-203ENST00000369774 A0A087WZG4 1122 aa15.13■□□□□ 0.01
SH3PXD2A-203ENST00000369774 C6orf229H3BNL8 230 aa15.13■□□□□ 0.01
SH3PXD2A-203ENST00000369774 POGZQ7Z3K3 1410 aa15.13■□□□□ 0.01
SH3PXD2A-203ENST00000369774 TOP1P11387 765 aaKnown RBP15.13■□□□□ 0.01
SH3PXD2A-203ENST00000369774 IFIT3O14879 490 aaKnown RBP15.13■□□□□ 0.01
SH3PXD2A-203ENST00000369774 USHBP1Q8N6Y0 703 aa15.13■□□□□ 0.01
SH3PXD2A-203ENST00000369774 TRMT112Q9UI30 125 aaKnown RBP15.13■□□□□ 0.01
SH3PXD2A-203ENST00000369774 PTPN14Q15678 1187 aa15.13■□□□□ 0.01
SH3PXD2A-203ENST00000369774 CFTRP13569 1480 aa15.13■□□□□ 0.01
SH3PXD2A-203ENST00000369774 KIF4BQ2VIQ3 1234 aa15.13■□□□□ 0.01
SH3PXD2A-203ENST00000369774 ANO10Q9NW15 660 aa15.13■□□□□ 0.01
SH3PXD2A-203ENST00000369774 NSD3Q9BZ95 1437 aa15.13■□□□□ 0.01
SH3PXD2A-203ENST00000369774 GBP3Q9H0R5 595 aa15.12■□□□□ 0.01
SH3PXD2A-203ENST00000369774 PRG4Q92954 1404 aaPredicted RBP15.12■□□□□ 0.01
SH3PXD2A-203ENST00000369774 VAT1LQ9HCJ6 419 aa15.12■□□□□ 0.01
SH3PXD2A-203ENST00000369774 ATAD2Q6PL18 1390 aa15.12■□□□□ 0.01
SH3PXD2A-203ENST00000369774 CASKIN1Q8WXD9 1431 aa15.12■□□□□ 0.01
SH3PXD2A-203ENST00000369774 BAG4O95429 457 aaKnown RBP15.12■□□□□ 0.01
SH3PXD2A-203ENST00000369774 RPAP2Q8IXW5 612 aaPredicted RBP15.12■□□□□ 0.01
SH3PXD2A-203ENST00000369774 CEP63Q96MT8 703 aa15.12■□□□□ 0.01
SH3PXD2A-203ENST00000369774 TMX1Q9H3N1 280 aa15.12■□□□□ 0.01
SH3PXD2A-203ENST00000369774 PUF60Q9UHX1 559 aaKnown RBP15.12■□□□□ 0.01
SH3PXD2A-203ENST00000369774 THUMPD2Q9BTF0 503 aaKnown RBP15.12■□□□□ 0.01
SH3PXD2A-203ENST00000369774 ZSCAN12O43309 604 aa15.12■□□□□ 0.01
SH3PXD2A-203ENST00000369774 MX1P20591 662 aa15.12■□□□□ 0.01
SH3PXD2A-203ENST00000369774 CCDC194A0A1B0GVG4 234 aa15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 TDRD12Q587J7 1177 aaKnown RBP15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 MCM4P33991 863 aa15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 CETN1Q12798 172 aa15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 GOLGA8BA8MQT2 603 aa15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 PRKCSHP14314 528 aaPredicted RBP15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 CCT2P78371 535 aaKnown RBP15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 SYCP3Q8IZU3 236 aa15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 CIZ1Q9ULV3 898 aaPredicted RBP15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 MTIF2P46199 727 aaKnown RBP15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 TAF7Q15545 349 aaPredicted RBP15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 CCDC8Q9H0W5 538 aaPredicted RBP15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 KIAA1107Q9UPP5 1409 aa15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 BACH2Q9BYV9 841 aa15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 GCOM1H8Y6P7 765 aaPredicted RBP15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 USO1O60763 962 aaKnown RBP15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 MYZAPP0CAP1 466 aa15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 CNNM3Q8NE01 707 aa15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 ANKRD18BA2A2Z9 1011 aa15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 GPTP24298 496 aa15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 CCDC144CPQ8IYA2 1237 aa15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 SAMM50Q9Y512 469 aa15.11■□□□□ 0.01
SH3PXD2A-203ENST00000369774 ERICH3Q5RHP9 1530 aa15.1■□□□□ 0.01
SH3PXD2A-203ENST00000369774 SHTN1A0MZ66 631 aa15.1■□□□□ 0.01
SH3PXD2A-203ENST00000369774 CA8P35219 290 aa15.1■□□□□ 0.01
SH3PXD2A-203ENST00000369774 PAFAH1B1P43034 410 aa15.1■□□□□ 0.01
SH3PXD2A-203ENST00000369774 SLC4A8Q2Y0W8 1093 aa15.1■□□□□ 0.01
SH3PXD2A-203ENST00000369774 PLEKHH2Q8IVE3 1493 aa15.1■□□□□ 0.01
SH3PXD2A-203ENST00000369774 CCDC183Q5T5S1 534 aa15.1■□□□□ 0.01
SH3PXD2A-203ENST00000369774 URI1O94763 535 aaPredicted RBP15.1■□□□□ 0.01
SH3PXD2A-203ENST00000369774 RAPGEF3O95398 923 aa15.1■□□□□ 0.01
SH3PXD2A-203ENST00000369774 CPLX3Q8WVH0 158 aa15.1■□□□□ 0.01
SH3PXD2A-203ENST00000369774 CALML4Q96GE6 196 aa15.1■□□□□ 0.01
SH3PXD2A-203ENST00000369774 CCDC61Q9Y6R9 512 aa15.1■□□□□ 0.01
SH3PXD2A-203ENST00000369774 NGLY1Q96IV0 654 aa15.1■□□□□ 0.01
SH3PXD2A-203ENST00000369774 RNF41Q9H4P4 317 aaPredicted RBP15.1■□□□□ 0.01
SH3PXD2A-203ENST00000369774 TTC16Q8NEE8 873 aa15.09■□□□□ 0.01
SH3PXD2A-203ENST00000369774 HMGB1P09429 215 aaKnown RBP15.09■□□□□ 0.01
SH3PXD2A-203ENST00000369774 TCERG1LQ5VWI1 586 aa15.09■□□□□ 0.01
SH3PXD2A-203ENST00000369774 MCM3P25205 808 aa15.09■□□□□ 0.01
SH3PXD2A-203ENST00000369774 GOLGA8AA7E2F4 631 aa15.09■□□□□ 0.01
SH3PXD2A-203ENST00000369774 KIF18AQ8NI77 898 aa15.09■□□□□ 0.01
SH3PXD2A-203ENST00000369774 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.09■□□□□ 0.019e-8■■■■■ 32.1
SH3PXD2A-203ENST00000369774 PRPF4BQ13523 1007 aaKnown RBP15.09■□□□□ 0.01
SH3PXD2A-203ENST00000369774 NOP2P46087 812 aaKnown RBP15.08■□□□□ 0.01
SH3PXD2A-203ENST00000369774 TAOK3Q9H2K8 898 aa15.08■□□□□ 0.01
SH3PXD2A-203ENST00000369774 PRC1O43663 620 aa15.08■□□□□ 0
SH3PXD2A-203ENST00000369774 GIMAP7Q8NHV1 300 aa15.08■□□□□ 0
SH3PXD2A-203ENST00000369774 KIF2AO00139 706 aaPredicted RBP15.08■□□□□ 0
SH3PXD2A-203ENST00000369774 SPECC1Q5M775 1068 aa15.08■□□□□ 0
SH3PXD2A-203ENST00000369774 SH2B1Q9NRF2 756 aaPredicted RBP15.08■□□□□ 0
SH3PXD2A-203ENST00000369774 HLTFQ14527 1009 aaKnown RBP eCLIP15.08■□□□□ 03e-8■□□□□ 10.9
SH3PXD2A-203ENST00000369774 PDCL2Q8N4E4 241 aa15.08■□□□□ 0
SH3PXD2A-203ENST00000369774 WAPLQ7Z5K2 1190 aa15.07■□□□□ 0
SH3PXD2A-203ENST00000369774 HECW1Q76N89 1606 aa15.07■□□□□ 0
SH3PXD2A-203ENST00000369774 GRIN2BQ13224 1484 aa15.07■□□□□ 0
SH3PXD2A-203ENST00000369774 AMOTQ4VCS5 1084 aa15.07■□□□□ 0
SH3PXD2A-203ENST00000369774 TMCO5BA8MYB1 307 aa15.07■□□□□ 0
SH3PXD2A-203ENST00000369774 HOMER2Q9NSB8 354 aa15.07■□□□□ 0
SH3PXD2A-203ENST00000369774 LMAN1P49257 510 aa15.07■□□□□ 0
SH3PXD2A-203ENST00000369774 CCDC40Q4G0X9 1142 aa15.07■□□□□ 0
SH3PXD2A-203ENST00000369774 SCAND2PQ9GZW5 306 aaPredicted RBP15.07■□□□□ 0
SH3PXD2A-203ENST00000369774 TCP11L1Q9NUJ3 509 aa15.07■□□□□ 0
SH3PXD2A-203ENST00000369774 TTC21AQ8NDW8 1320 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms