RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 MTA3Q9BTC8 594 aa6.45□□□□□ -1.38
UBE3D-202ENST00000369746 WDR17Q8IZU2 1322 aa6.45□□□□□ -1.38
UBE3D-202ENST00000369746 KIF4AO95239 1232 aa6.44□□□□□ -1.38
UBE3D-202ENST00000369746 ANP32AP39687 249 aaKnown RBP6.44□□□□□ -1.38
UBE3D-202ENST00000369746 TGFB2P61812 414 aa6.44□□□□□ -1.38
UBE3D-202ENST00000369746 CGNL1Q0VF96 1302 aa6.44□□□□□ -1.38
UBE3D-202ENST00000369746 SMAP1Q8IYB5 467 aaPredicted RBP6.44□□□□□ -1.38
UBE3D-202ENST00000369746 KDM2BQ8NHM5 1336 aa6.44□□□□□ -1.38
UBE3D-202ENST00000369746 CPSF1Q10570 1443 aaKnown RBP6.43□□□□□ -1.38
UBE3D-202ENST00000369746 TPM2P07951 284 aa6.43□□□□□ -1.38
UBE3D-202ENST00000369746 SEMA3FQ13275 785 aa6.43□□□□□ -1.38
UBE3D-202ENST00000369746 MYBPC2Q14324 1141 aa6.43□□□□□ -1.38
UBE3D-202ENST00000369746 CCDC96Q2M329 555 aa6.43□□□□□ -1.38
UBE3D-202ENST00000369746 PROM2Q8N271 834 aa6.43□□□□□ -1.38
UBE3D-202ENST00000369746 KDM4CQ9H3R0 1056 aa6.43□□□□□ -1.38
UBE3D-202ENST00000369746 ZBTB47Q9UFB7 747 aaPredicted RBP6.43□□□□□ -1.38
UBE3D-202ENST00000369746 PPIP5K1Q6PFW1 1433 aa6.43□□□□□ -1.38
UBE3D-202ENST00000369746 USP31Q70CQ4 1352 aa6.43□□□□□ -1.38
UBE3D-202ENST00000369746 SSFA2P28290 1259 aa6.43□□□□□ -1.38
UBE3D-202ENST00000369746 CTCFP49711 727 aaPredicted RBP6.43□□□□□ -1.38
UBE3D-202ENST00000369746 DDB1Q16531 1140 aa6.43□□□□□ -1.38
UBE3D-202ENST00000369746 PDZRN3Q9UPQ7 1066 aa6.43□□□□□ -1.38
UBE3D-202ENST00000369746 ARIH1Q9Y4X5 557 aaPredicted RBP6.43□□□□□ -1.38
UBE3D-202ENST00000369746 RGL3Q3MIN7 710 aa6.42□□□□□ -1.38
UBE3D-202ENST00000369746 NLRP13Q86W25 1043 aa6.42□□□□□ -1.38
UBE3D-202ENST00000369746 KCNH5Q8NCM2 988 aa6.42□□□□□ -1.38
UBE3D-202ENST00000369746 TAF1LQ8IZX4 1826 aa6.42□□□□□ -1.38
UBE3D-202ENST00000369746 DLEC1Q9Y238 1755 aa6.42□□□□□ -1.38
UBE3D-202ENST00000369746 NFAT5O94916 1531 aa6.42□□□□□ -1.38
UBE3D-202ENST00000369746 TTC21AQ8NDW8 1320 aa6.42□□□□□ -1.38
UBE3D-202ENST00000369746 TAF3Q5VWG9 929 aa6.41□□□□□ -1.38
UBE3D-202ENST00000369746 DNAJC14Q6Y2X3 702 aaPredicted RBP6.41□□□□□ -1.38
UBE3D-202ENST00000369746 GPATCH3Q96I76 525 aa6.41□□□□□ -1.38
UBE3D-202ENST00000369746 PPP4R2Q9NY27 417 aa6.41□□□□□ -1.38
UBE3D-202ENST00000369746 ADAMTS7Q9UKP4 1686 aa6.41□□□□□ -1.38
UBE3D-202ENST00000369746 IRF6O14896 467 aa6.41□□□□□ -1.38
UBE3D-202ENST00000369746 CA12O43570 354 aa6.41□□□□□ -1.38
UBE3D-202ENST00000369746 RHBDL3P58872 404 aa6.41□□□□□ -1.38
UBE3D-202ENST00000369746 KRBA2Q6ZNG9 492 aa6.41□□□□□ -1.38
UBE3D-202ENST00000369746 USP6P35125 1406 aa6.41□□□□□ -1.38
UBE3D-202ENST00000369746 TTC36A6NLP5 189 aa6.41□□□□□ -1.38
UBE3D-202ENST00000369746 PAK3O75914 559 aaPredicted RBP6.41□□□□□ -1.38
UBE3D-202ENST00000369746 IRX3P78415 501 aaPredicted RBP6.41□□□□□ -1.38
UBE3D-202ENST00000369746 CCDC184Q52MB2 194 aa6.41□□□□□ -1.38
UBE3D-202ENST00000369746 ANKRD36BQ8N2N9 1353 aa6.4□□□□□ -1.38
UBE3D-202ENST00000369746 WASLO00401 505 aaPredicted RBP6.4□□□□□ -1.38
UBE3D-202ENST00000369746 CLCN1P35523 988 aa6.4□□□□□ -1.38
UBE3D-202ENST00000369746 GET4Q7L5D6 327 aaPredicted RBP6.4□□□□□ -1.38
UBE3D-202ENST00000369746 NBPF11Q86T75 865 aa6.4□□□□□ -1.38
UBE3D-202ENST00000369746 MAP3K19Q56UN5 1328 aa6.4□□□□□ -1.39
UBE3D-202ENST00000369746 PNPLA7Q6ZV29 1317 aa6.4□□□□□ -1.39
UBE3D-202ENST00000369746 SLC4A2P04920 1241 aa6.4□□□□□ -1.39
UBE3D-202ENST00000369746 TERF1P54274 439 aa6.4□□□□□ -1.39
UBE3D-202ENST00000369746 ZFYVE27Q5T4F4 411 aa6.4□□□□□ -1.39
UBE3D-202ENST00000369746 MTERF4Q7Z6M4 381 aaKnown RBP6.4□□□□□ -1.39
UBE3D-202ENST00000369746 CREBRFQ8IUR6 639 aa6.4□□□□□ -1.39
UBE3D-202ENST00000369746 ATF5Q9Y2D1 282 aaPredicted RBP6.4□□□□□ -1.39
UBE3D-202ENST00000369746 ERBB3P21860 1342 aa6.39□□□□□ -1.39
UBE3D-202ENST00000369746 DHX16O60231 1041 aaKnown RBP6.39□□□□□ -1.39
UBE3D-202ENST00000369746 EVA1CP58658 441 aa6.39□□□□□ -1.39
UBE3D-202ENST00000369746 MLLT1Q03111 559 aaPredicted RBP6.39□□□□□ -1.39
UBE3D-202ENST00000369746 NBPF1Q3BBV0 1214 aa6.39□□□□□ -1.39
UBE3D-202ENST00000369746 LONRF3Q496Y0 759 aa6.39□□□□□ -1.39
UBE3D-202ENST00000369746 COL13A1Q5TAT6 717 aaPredicted RBP6.39□□□□□ -1.39
UBE3D-202ENST00000369746 CREBZFQ9NS37 354 aa6.39□□□□□ -1.39
UBE3D-202ENST00000369746 KAT6BQ8WYB5 2073 aa6.39□□□□□ -1.39
UBE3D-202ENST00000369746 GTPBP6O43824 516 aaPredicted RBP6.39□□□□□ -1.39
UBE3D-202ENST00000369746 RGS3P49796 1198 aa6.39□□□□□ -1.39
UBE3D-202ENST00000369746 ATL2Q8NHH9 583 aa6.39□□□□□ -1.39
UBE3D-202ENST00000369746 GABBR1Q9UBS5 961 aa6.39□□□□□ -1.39
UBE3D-202ENST00000369746 KIF24Q5T7B8 1368 aa6.39□□□□□ -1.39
UBE3D-202ENST00000369746 ARFGEF2Q9Y6D5 1785 aa6.38□□□□□ -1.39
UBE3D-202ENST00000369746 CAPN2P17655 700 aa6.38□□□□□ -1.39
UBE3D-202ENST00000369746 PSEN1P49768 467 aa6.38□□□□□ -1.39
UBE3D-202ENST00000369746 AXDND1Q5T1B0 1012 aaPredicted RBP6.38□□□□□ -1.39
UBE3D-202ENST00000369746 EGFL6Q8IUX8 553 aa6.38□□□□□ -1.39
UBE3D-202ENST00000369746 PMFBP1Q8TBY8 1022 aa6.38□□□□□ -1.39
UBE3D-202ENST00000369746 POM121Q96HA1 1249 aa6.38□□□□□ -1.39
UBE3D-202ENST00000369746 MON2Q7Z3U7 1717 aa6.38□□□□□ -1.39
UBE3D-202ENST00000369746 UBR3Q6ZT12 1888 aa6.38□□□□□ -1.39
UBE3D-202ENST00000369746 VGLL3A8MV65 326 aa6.38□□□□□ -1.39
UBE3D-202ENST00000369746 PARNO95453 639 aaKnown RBP6.38□□□□□ -1.39
UBE3D-202ENST00000369746 PMM1Q92871 262 aa6.38□□□□□ -1.39
UBE3D-202ENST00000369746 MRRFQ96E11 262 aaKnown RBP6.38□□□□□ -1.39
UBE3D-202ENST00000369746 SCN4AP35499 1836 aa6.37□□□□□ -1.39
UBE3D-202ENST00000369746 PLEKHH1Q9ULM0 1364 aa6.37□□□□□ -1.39
UBE3D-202ENST00000369746 A0A0G2JS52 829 aa6.37□□□□□ -1.39
UBE3D-202ENST00000369746 EPB41L2O43491 1005 aaKnown RBP6.37□□□□□ -1.39
UBE3D-202ENST00000369746 CREB3O43889 395 aa6.37□□□□□ -1.39
UBE3D-202ENST00000369746 ZMYND10O75800 440 aa6.37□□□□□ -1.39
UBE3D-202ENST00000369746 YBX3P16989 372 aaKnown RBP eCLIP6.37□□□□□ -1.39
UBE3D-202ENST00000369746 CCDC181Q5TID7 509 aa6.37□□□□□ -1.39
UBE3D-202ENST00000369746 C16orf71Q8IYS4 520 aaPredicted RBP6.37□□□□□ -1.39
UBE3D-202ENST00000369746 CCDC97Q96F63 343 aaPredicted RBP6.37□□□□□ -1.39
UBE3D-202ENST00000369746 DICER1Q9UPY3 1922 aaKnown RBP6.37□□□□□ -1.39
UBE3D-202ENST00000369746 CNTNAP1P78357 1384 aa6.37□□□□□ -1.39
UBE3D-202ENST00000369746 ADAMTSL1Q8N6G6 1762 aa6.37□□□□□ -1.39
UBE3D-202ENST00000369746 SH3BP5O60239 455 aa6.37□□□□□ -1.39
UBE3D-202ENST00000369746 ZBTB7AO95365 584 aa6.37□□□□□ -1.39
UBE3D-202ENST00000369746 ATXN8OSP0DMR3 200 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms