RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 EIF5BO60841 1220 aaKnown RBP14.04□□□□□ -0.16
RAB39B-201ENST00000369454 PROSER2Q86WR7 435 aaPredicted RBP14.04□□□□□ -0.16
RAB39B-201ENST00000369454 MAP3K2Q9Y2U5 619 aa14.04□□□□□ -0.16
RAB39B-201ENST00000369454 PRPF40AO75400 957 aaKnown RBP14.04□□□□□ -0.16
RAB39B-201ENST00000369454 MRE11P49959 708 aa14.04□□□□□ -0.16
RAB39B-201ENST00000369454 CAVIN1Q6NZI2 390 aaKnown RBP14.04□□□□□ -0.16
RAB39B-201ENST00000369454 CABLES1Q8TDN4 633 aa14.03□□□□□ -0.16
RAB39B-201ENST00000369454 TMX3Q96JJ7 454 aa14.03□□□□□ -0.16
RAB39B-201ENST00000369454 NLRP2Q9NX02 1062 aa14.03□□□□□ -0.16
RAB39B-201ENST00000369454 MYL6BP14649 208 aa14.03□□□□□ -0.16
RAB39B-201ENST00000369454 AKAP4Q5JQC9 854 aa14.03□□□□□ -0.16
RAB39B-201ENST00000369454 BEND3Q5T5X7 828 aa14.03□□□□□ -0.16
RAB39B-201ENST00000369454 JARID2Q92833 1246 aaPredicted RBP14.03□□□□□ -0.16
RAB39B-201ENST00000369454 MCCP23508 829 aa14.03□□□□□ -0.16
RAB39B-201ENST00000369454 CWC27Q6UX04 472 aaKnown RBP14.03□□□□□ -0.16
RAB39B-201ENST00000369454 SSH3Q8TE77 659 aa14.03□□□□□ -0.16
RAB39B-201ENST00000369454 SALL3Q9BXA9 1300 aa14.03□□□□□ -0.16
RAB39B-201ENST00000369454 RNMTO43148 476 aaKnown RBP14.02□□□□□ -0.16
RAB39B-201ENST00000369454 KRT28Q7Z3Y7 464 aa14.02□□□□□ -0.16
RAB39B-201ENST00000369454 DDX54Q8TDD1 881 aaKnown RBP14.02□□□□□ -0.16
RAB39B-201ENST00000369454 SPG7Q9UQ90 795 aa14.02□□□□□ -0.16
RAB39B-201ENST00000369454 NUCB2P80303 420 aa14.02□□□□□ -0.17
RAB39B-201ENST00000369454 XRN1Q8IZH2 1706 aaKnown RBP14.02□□□□□ -0.17
RAB39B-201ENST00000369454 SIL1Q9H173 461 aa14.02□□□□□ -0.17
RAB39B-201ENST00000369454 ARHGEF25Q86VW2 580 aa14.01□□□□□ -0.17
RAB39B-201ENST00000369454 RBM27Q9P2N5 1060 aaKnown RBP14.01□□□□□ -0.17
RAB39B-201ENST00000369454 CSB-PGBD3P0DP91 1061 aa14.01□□□□□ -0.17
RAB39B-201ENST00000369454 SKOR2Q2VWA4 1001 aaPredicted RBP14.01□□□□□ -0.17
RAB39B-201ENST00000369454 FAM43AQ8N2R8 423 aa14.01□□□□□ -0.17
RAB39B-201ENST00000369454 CEMIPQ8WUJ3 1361 aa14.01□□□□□ -0.17
RAB39B-201ENST00000369454 CHRNA2Q15822 529 aa14□□□□□ -0.17
RAB39B-201ENST00000369454 DBF4Q9UBU7 674 aaPredicted RBP14□□□□□ -0.17
RAB39B-201ENST00000369454 ZDHHC9Q9Y397 364 aa14□□□□□ -0.17
RAB39B-201ENST00000369454 CPA1P15085 419 aa14□□□□□ -0.17
RAB39B-201ENST00000369454 KIF1BPQ96EK5 621 aa14□□□□□ -0.17
RAB39B-201ENST00000369454 PXDNQ92626 1479 aa13.99□□□□□ -0.17
RAB39B-201ENST00000369454 KLHDC4Q8TBB5 520 aa13.99□□□□□ -0.17
RAB39B-201ENST00000369454 GIGYF1O75420 1035 aaPredicted RBP13.99□□□□□ -0.17
RAB39B-201ENST00000369454 LTN1O94822 1766 aa13.99□□□□□ -0.17
RAB39B-201ENST00000369454 GDPD2Q9HCC8 539 aa13.99□□□□□ -0.17
RAB39B-201ENST00000369454 ADCY9O60503 1353 aa13.99□□□□□ -0.17
RAB39B-201ENST00000369454 BABAM1Q9NWV8 329 aa13.98□□□□□ -0.17
RAB39B-201ENST00000369454 AMOTQ4VCS5 1084 aa13.98□□□□□ -0.17
RAB39B-201ENST00000369454 PI4K2BQ8TCG2 481 aa13.98□□□□□ -0.17
RAB39B-201ENST00000369454 STAP2Q9UGK3 403 aa13.98□□□□□ -0.17
RAB39B-201ENST00000369454 NFATC2IPQ8NCF5 419 aa13.98□□□□□ -0.17
RAB39B-201ENST00000369454 CCDC9Q9Y3X0 531 aaKnown RBP13.98□□□□□ -0.17
RAB39B-201ENST00000369454 RGPD2P0DJD1 1756 aa13.98□□□□□ -0.17
RAB39B-201ENST00000369454 FAM208AQ9UK61 1670 aaKnown RBP13.97□□□□□ -0.17
RAB39B-201ENST00000369454 POLA2Q14181 598 aa13.97□□□□□ -0.17
RAB39B-201ENST00000369454 RAPGEF4Q8WZA2 1011 aa13.97□□□□□ -0.17
RAB39B-201ENST00000369454 CWC22Q9HCG8 908 aaKnown RBP13.97□□□□□ -0.17
RAB39B-201ENST00000369454 LMBRD1Q9NUN5 540 aa13.97□□□□□ -0.17
RAB39B-201ENST00000369454 RIC3Q7Z5B4 369 aa13.97□□□□□ -0.17
RAB39B-201ENST00000369454 CLASRPQ8N2M8 674 aaKnown RBP13.97□□□□□ -0.17
RAB39B-201ENST00000369454 TRIM44Q96DX7 344 aaPredicted RBP13.97□□□□□ -0.17
RAB39B-201ENST00000369454 CCDC8Q9H0W5 538 aaPredicted RBP13.97□□□□□ -0.17
RAB39B-201ENST00000369454 MARF1Q9Y4F3 1742 aaKnown RBP13.97□□□□□ -0.17
RAB39B-201ENST00000369454 ADGRL3Q9HAR2 1447 aa13.97□□□□□ -0.17
RAB39B-201ENST00000369454 RAB11FIP3O75154 756 aa13.97□□□□□ -0.17
RAB39B-201ENST00000369454 KLHL40Q2TBA0 621 aa13.97□□□□□ -0.17
RAB39B-201ENST00000369454 KIAA1211Q6ZU35 1233 aa13.97□□□□□ -0.17
RAB39B-201ENST00000369454 NSFL1CQ9UNZ2 370 aaKnown RBP13.97□□□□□ -0.17
RAB39B-201ENST00000369454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.97□□□□□ -0.17
RAB39B-201ENST00000369454 IFIT2P09913 472 aaKnown RBP13.96□□□□□ -0.17
RAB39B-201ENST00000369454 AACSQ86V21 672 aa13.96□□□□□ -0.17
RAB39B-201ENST00000369454 CNTROBQ8N137 903 aa13.96□□□□□ -0.17
RAB39B-201ENST00000369454 CYP2E1P05181 493 aaPredicted RBP13.95□□□□□ -0.18
RAB39B-201ENST00000369454 KSR2Q6VAB6 950 aa13.95□□□□□ -0.18
RAB39B-201ENST00000369454 RASEFQ8IZ41 740 aa13.95□□□□□ -0.18
RAB39B-201ENST00000369454 DIAPH3Q9NSV4 1193 aa13.95□□□□□ -0.18
RAB39B-201ENST00000369454 NASPP49321 788 aaPredicted RBP13.95□□□□□ -0.18
RAB39B-201ENST00000369454 SUCLG2Q96I99 432 aa13.95□□□□□ -0.18
RAB39B-201ENST00000369454 BICC1Q9H694 974 aaKnown RBP13.95□□□□□ -0.18
RAB39B-201ENST00000369454 NFAT5O94916 1531 aa13.94□□□□□ -0.18
RAB39B-201ENST00000369454 GPT2Q8TD30 523 aa13.94□□□□□ -0.18
RAB39B-201ENST00000369454 LRRC37A3O60309 1634 aa13.94□□□□□ -0.18
RAB39B-201ENST00000369454 ZSCAN23Q3MJ62 389 aa13.94□□□□□ -0.18
RAB39B-201ENST00000369454 PTMSP20962 102 aa13.94□□□□□ -0.18
RAB39B-201ENST00000369454 SGSM2O43147 1006 aa13.93□□□□□ -0.18
RAB39B-201ENST00000369454 HOXB7P09629 217 aa13.93□□□□□ -0.18
RAB39B-201ENST00000369454 KCNJ4P48050 445 aa13.93□□□□□ -0.18
RAB39B-201ENST00000369454 MYD88Q99836 296 aa13.93□□□□□ -0.18
RAB39B-201ENST00000369454 TLR7Q9NYK1 1049 aaKnown RBP13.93□□□□□ -0.18
RAB39B-201ENST00000369454 NPHP4O75161 1426 aaPredicted RBP13.93□□□□□ -0.18
RAB39B-201ENST00000369454 ATF3P18847 181 aa13.93□□□□□ -0.18
RAB39B-201ENST00000369454 ZNF790Q6PG37 636 aa13.93□□□□□ -0.18
RAB39B-201ENST00000369454 COPS6Q7L5N1 327 aa13.93□□□□□ -0.18
RAB39B-201ENST00000369454 XAGE3Q8WTP9 111 aa13.93□□□□□ -0.18
RAB39B-201ENST00000369454 BOLA2Q9H3K6 86 aa13.93□□□□□ -0.18
RAB39B-201ENST00000369454 ERBB3P21860 1342 aa13.92□□□□□ -0.18
RAB39B-201ENST00000369454 SYCE3A1L190 88 aa13.92□□□□□ -0.18
RAB39B-201ENST00000369454 GRM8O00222 908 aa13.92□□□□□ -0.18
RAB39B-201ENST00000369454 PRPF40BQ6NWY9 871 aaKnown RBP13.92□□□□□ -0.18
RAB39B-201ENST00000369454 RNF214Q8ND24 703 aa13.92□□□□□ -0.18
RAB39B-201ENST00000369454 SNX14Q9Y5W7 946 aa13.92□□□□□ -0.18
RAB39B-201ENST00000369454 NDUFB9Q9Y6M9 179 aa13.92□□□□□ -0.18
RAB39B-201ENST00000369454 ATP5J2-PTCD1G3V325 749 aa13.92□□□□□ -0.18
RAB39B-201ENST00000369454 PTCD1O75127 700 aaKnown RBP13.92□□□□□ -0.18
RAB39B-201ENST00000369454 CASTP20810 708 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms