RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 SNRKQ9NRH2 765 aa21.13■□□□□ 0.97
SNX27-202ENST00000368841 POLR3GO15318 223 aaPredicted RBP21.13■□□□□ 0.97
SNX27-202ENST00000368841 PRKCSHP14314 528 aaPredicted RBP21.13■□□□□ 0.97
SNX27-202ENST00000368841 TDRD12Q587J7 1177 aaKnown RBP21.12■□□□□ 0.97
SNX27-202ENST00000368841 HMGN5P82970 282 aaKnown RBP21.12■□□□□ 0.97
SNX27-202ENST00000368841 GSTTP1A0A1W2PQM5 241 aa21.12■□□□□ 0.97
SNX27-202ENST00000368841 SSRP1Q08945 709 aaKnown RBP21.12■□□□□ 0.97
SNX27-202ENST00000368841 PUS7Q96PZ0 661 aaKnown RBP21.12■□□□□ 0.97
SNX27-202ENST00000368841 MTERF4Q7Z6M4 381 aaKnown RBP21.12■□□□□ 0.97
SNX27-202ENST00000368841 TICAM2Q86XR7 235 aa21.12■□□□□ 0.97
SNX27-202ENST00000368841 NME9Q86XW9 330 aa21.12■□□□□ 0.97
SNX27-202ENST00000368841 ATP5J2-PTCD1G3V325 749 aa21.11■□□□□ 0.97
SNX27-202ENST00000368841 SRRTQ9BXP5 876 aaKnown RBP21.11■□□□□ 0.97
SNX27-202ENST00000368841 ANKRD30BQ9BXX2 1392 aa21.11■□□□□ 0.97
SNX27-202ENST00000368841 PPP1R12BO60237 982 aaPredicted RBP21.11■□□□□ 0.97
SNX27-202ENST00000368841 URI1O94763 535 aaPredicted RBP21.11■□□□□ 0.97
SNX27-202ENST00000368841 C8orf76Q96K31 380 aa21.11■□□□□ 0.97
SNX27-202ENST00000368841 GOLGA8BA8MQT2 603 aa21.11■□□□□ 0.97
SNX27-202ENST00000368841 FKBP15Q5T1M5 1219 aa21.11■□□□□ 0.97
SNX27-202ENST00000368841 KRT32Q14532 448 aa21.1■□□□□ 0.97
SNX27-202ENST00000368841 C6orf229H3BNL8 230 aa21.1■□□□□ 0.97
SNX27-202ENST00000368841 PRPF4BQ13523 1007 aaKnown RBP21.1■□□□□ 0.97
SNX27-202ENST00000368841 GOLGA8AA7E2F4 631 aa21.1■□□□□ 0.97
SNX27-202ENST00000368841 CUL5Q93034 780 aa21.1■□□□□ 0.97
SNX27-202ENST00000368841 ZNF652Q9Y2D9 606 aa21.1■□□□□ 0.97
SNX27-202ENST00000368841 ZNF213O14771 459 aa21.1■□□□□ 0.97
SNX27-202ENST00000368841 IFFO1Q0D2I5 559 aa21.1■□□□□ 0.97
SNX27-202ENST00000368841 SAMM50Q9Y512 469 aa21.1■□□□□ 0.97
SNX27-202ENST00000368841 COMMD10Q9Y6G5 202 aa21.1■□□□□ 0.97
SNX27-202ENST00000368841 U3KPZ7 1027 aaPredicted RBP21.1■□□□□ 0.97
SNX27-202ENST00000368841 IFIT3O14879 490 aaKnown RBP21.1■□□□□ 0.97
SNX27-202ENST00000368841 IFIT5Q13325 482 aaKnown RBP21.1■□□□□ 0.97
SNX27-202ENST00000368841 TMCO3Q6UWJ1 677 aa21.1■□□□□ 0.97
SNX27-202ENST00000368841 MCM4P33991 863 aa21.09■□□□□ 0.97
SNX27-202ENST00000368841 AKAP2Q9Y2D5 859 aa21.09■□□□□ 0.97
SNX27-202ENST00000368841 SYNJ2O15056 1496 aa21.09■□□□□ 0.97
SNX27-202ENST00000368841 TRIM21P19474 475 aaKnown RBP21.09■□□□□ 0.97
SNX27-202ENST00000368841 TFIP11Q9UBB9 837 aaKnown RBP21.09■□□□□ 0.97
SNX27-202ENST00000368841 SSFA2P28290 1259 aa21.08■□□□□ 0.97
SNX27-202ENST00000368841 CLIP2Q9UDT6 1046 aa21.08■□□□□ 0.97
SNX27-202ENST00000368841 ZNF622Q969S3 477 aaKnown RBP eCLIP21.08■□□□□ 0.97
SNX27-202ENST00000368841 LUZP1Q86V48 1076 aa21.08■□□□□ 0.97
SNX27-202ENST00000368841 KIF1BPQ96EK5 621 aa21.08■□□□□ 0.97
SNX27-202ENST00000368841 F8W031 263 aaPredicted RBP21.08■□□□□ 0.97
SNX27-202ENST00000368841 SLC5A1P13866 664 aa21.08■□□□□ 0.97
SNX27-202ENST00000368841 TCERG1LQ5VWI1 586 aa21.08■□□□□ 0.97
SNX27-202ENST00000368841 LARP1Q6PKG0 1096 aaKnown RBP21.08■□□□□ 0.97
SNX27-202ENST00000368841 GOLIM4O00461 696 aa21.08■□□□□ 0.96
SNX27-202ENST00000368841 HSP90AA4PQ58FG1 418 aa21.08■□□□□ 0.96
SNX27-202ENST00000368841 CCDC91Q7Z6B0 441 aa21.08■□□□□ 0.96
SNX27-202ENST00000368841 FERMT2Q96AC1 680 aa21.08■□□□□ 0.96
SNX27-202ENST00000368841 KIF4BQ2VIQ3 1234 aa21.08■□□□□ 0.96
SNX27-202ENST00000368841 RBM27Q9P2N5 1060 aaKnown RBP21.08■□□□□ 0.96
SNX27-202ENST00000368841 TOP1P11387 765 aaKnown RBP21.07■□□□□ 0.96
SNX27-202ENST00000368841 CTNNA2P26232 953 aa21.07■□□□□ 0.96
SNX27-202ENST00000368841 CNNM3Q8NE01 707 aa21.07■□□□□ 0.96
SNX27-202ENST00000368841 UBXN4Q92575 508 aa21.07■□□□□ 0.96
SNX27-202ENST00000368841 CRACR2AQ9BSW2 395 aa21.07■□□□□ 0.96
SNX27-202ENST00000368841 RNF187Q5TA31 235 aaPredicted RBP21.07■□□□□ 0.96
SNX27-202ENST00000368841 CTCFLQ8NI51 663 aaPredicted RBP21.07■□□□□ 0.96
SNX27-202ENST00000368841 MAP3K2Q9Y2U5 619 aa21.06■□□□□ 0.96
SNX27-202ENST00000368841 EMILIN1Q9Y6C2 1016 aa21.06■□□□□ 0.96
SNX27-202ENST00000368841 TMCO5BA8MYB1 307 aa21.06■□□□□ 0.96
SNX27-202ENST00000368841 PDCL2Q8N4E4 241 aa21.06■□□□□ 0.96
SNX27-202ENST00000368841 PTPN14Q15678 1187 aa21.05■□□□□ 0.96
SNX27-202ENST00000368841 FEZ1Q99689 392 aa21.05■□□□□ 0.96
SNX27-202ENST00000368841 KIF5CO60282 957 aa21.05■□□□□ 0.96
SNX27-202ENST00000368841 RAB11FIP3O75154 756 aa21.05■□□□□ 0.96
SNX27-202ENST00000368841 MAP3K12Q12852 859 aa21.05■□□□□ 0.96
SNX27-202ENST00000368841 CCDC150Q8NCX0 1101 aa21.05■□□□□ 0.96
SNX27-202ENST00000368841 NF2P35240 595 aa21.05■□□□□ 0.96
SNX27-202ENST00000368841 DRC1Q96MC2 740 aa21.04■□□□□ 0.96
SNX27-202ENST00000368841 ZSWIM4Q9H7M6 989 aa21.04■□□□□ 0.96
SNX27-202ENST00000368841 TMC6Q7Z403 805 aa21.04■□□□□ 0.96
SNX27-202ENST00000368841 IQSEC3Q9UPP2 1182 aaPredicted RBP21.04■□□□□ 0.96
SNX27-202ENST00000368841 RGS22Q8NE09 1264 aa21.04■□□□□ 0.96
SNX27-202ENST00000368841 C16orf45Q96MC5 204 aaPredicted RBP21.04■□□□□ 0.96
SNX27-202ENST00000368841 SFPQP23246 707 aaKnown RBP eCLIP21.03■□□□□ 0.96
SNX27-202ENST00000368841 GJB2P29033 226 aa21.03■□□□□ 0.96
SNX27-202ENST00000368841 MTIF2P46199 727 aaKnown RBP21.03■□□□□ 0.96
SNX27-202ENST00000368841 FSIP1Q8NA03 581 aa21.03■□□□□ 0.96
SNX27-202ENST00000368841 KIAA1107Q9UPP5 1409 aa21.03■□□□□ 0.96
SNX27-202ENST00000368841 ANKRD18BA2A2Z9 1011 aa21.03■□□□□ 0.96
SNX27-202ENST00000368841 ACSBG1Q96GR2 724 aa21.03■□□□□ 0.96
SNX27-202ENST00000368841 FOXO3O43524 673 aa21.03■□□□□ 0.96
SNX27-202ENST00000368841 PRC1O43663 620 aa21.03■□□□□ 0.96
SNX27-202ENST00000368841 CCDC194A0A1B0GVG4 234 aa21.03■□□□□ 0.96
SNX27-202ENST00000368841 ANXA1P04083 346 aa21.03■□□□□ 0.96
SNX27-202ENST00000368841 TMEM266Q2M3C6 531 aa21.03■□□□□ 0.96
SNX27-202ENST00000368841 ZNF287Q9HBT7 754 aa21.03■□□□□ 0.96
SNX27-202ENST00000368841 USP25Q9UHP3 1055 aa21.03■□□□□ 0.96
SNX27-202ENST00000368841 FCHSD2O94868 740 aa21.03■□□□□ 0.96
SNX27-202ENST00000368841 SYCP3Q8IZU3 236 aa21.02■□□□□ 0.96
SNX27-202ENST00000368841 CASKIN1Q8WXD9 1431 aa21.02■□□□□ 0.96
SNX27-202ENST00000368841 A0A087WZG4 1122 aa21.02■□□□□ 0.96
SNX27-202ENST00000368841 FBLN1P23142 703 aa21.02■□□□□ 0.96
SNX27-202ENST00000368841 ZNF354CQ86Y25 554 aa21.02■□□□□ 0.96
SNX27-202ENST00000368841 SSH1Q8WYL5 1049 aa21.02■□□□□ 0.96
SNX27-202ENST00000368841 SLFN5Q08AF3 891 aa21.02■□□□□ 0.96
SNX27-202ENST00000368841 MICU3Q86XE3 530 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms