RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 TTC5Q8N0Z6 440 aa13.05□□□□□ -0.32
CD48-202ENST00000368046 VSIG10Q8N0Z9 540 aa13.05□□□□□ -0.32
CD48-202ENST00000368046 ARXQ96QS3 562 aa13.05□□□□□ -0.32
CD48-202ENST00000368046 RTCBQ9Y3I0 505 aaKnown RBP13.05□□□□□ -0.32
CD48-202ENST00000368046 CEMIPQ8WUJ3 1361 aa13.05□□□□□ -0.32
CD48-202ENST00000368046 BTBD11A6QL63 1104 aa13.04□□□□□ -0.32
CD48-202ENST00000368046 PHF14O94880 888 aa13.04□□□□□ -0.32
CD48-202ENST00000368046 SMIM5Q71RC9 77 aa13.04□□□□□ -0.32
CD48-202ENST00000368046 MCM10Q7L590 875 aa13.04□□□□□ -0.32
CD48-202ENST00000368046 AMIGO3Q86WK7 504 aa13.04□□□□□ -0.32
CD48-202ENST00000368046 MAPK8IP3Q9UPT6 1336 aa13.04□□□□□ -0.32
CD48-202ENST00000368046 CASZ1Q86V15 1759 aa13.04□□□□□ -0.32
CD48-202ENST00000368046 DCTN1Q14203 1278 aa13.03□□□□□ -0.32
CD48-202ENST00000368046 WDR43Q15061 677 aaKnown RBP eCLIP13.03□□□□□ -0.32
CD48-202ENST00000368046 TAF7Q15545 349 aaPredicted RBP13.03□□□□□ -0.32
CD48-202ENST00000368046 NFE2L2Q16236 605 aa13.03□□□□□ -0.32
CD48-202ENST00000368046 DNAJC10Q8IXB1 793 aa13.03□□□□□ -0.32
CD48-202ENST00000368046 ADAMTS8Q9UP79 889 aa13.03□□□□□ -0.32
CD48-202ENST00000368046 CNTNAP4Q9C0A0 1308 aa13.03□□□□□ -0.32
CD48-202ENST00000368046 CYP19A1P11511 503 aaPredicted RBP13.02□□□□□ -0.33
CD48-202ENST00000368046 CRKLP46109 303 aaKnown RBP13.02□□□□□ -0.33
CD48-202ENST00000368046 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
CD48-202ENST00000368046 ZNF496Q96IT1 587 aaPredicted RBP13.02□□□□□ -0.33
CD48-202ENST00000368046 TEX13AQ9BXU3 409 aaPredicted RBP13.02□□□□□ -0.33
CD48-202ENST00000368046 SCN11AQ9UI33 1791 aa13.02□□□□□ -0.33
CD48-202ENST00000368046 STARD3NLO95772 234 aa13.01□□□□□ -0.33
CD48-202ENST00000368046 RIPK4P57078 832 aa13.01□□□□□ -0.33
CD48-202ENST00000368046 INTS5Q6P9B9 1019 aaKnown RBP13.01□□□□□ -0.33
CD48-202ENST00000368046 FMNL2Q96PY5 1086 aa13.01□□□□□ -0.33
CD48-202ENST00000368046 SYT17Q9BSW7 474 aa13.01□□□□□ -0.33
CD48-202ENST00000368046 MRC1P22897 1456 aa13.01□□□□□ -0.33
CD48-202ENST00000368046 ADAMTS7Q9UKP4 1686 aa13.01□□□□□ -0.33
CD48-202ENST00000368046 C4BP0C0L5 1744 aa13□□□□□ -0.33
CD48-202ENST00000368046 C5P01031 1676 aa13□□□□□ -0.33
CD48-202ENST00000368046 ANP32CO43423 234 aa13□□□□□ -0.33
CD48-202ENST00000368046 RFC4P35249 363 aa13□□□□□ -0.33
CD48-202ENST00000368046 NLGN1Q8N2Q7 840 aa13□□□□□ -0.33
CD48-202ENST00000368046 RUNDC1Q96C34 613 aa13□□□□□ -0.33
CD48-202ENST00000368046 FHDC1Q9C0D6 1143 aaPredicted RBP13□□□□□ -0.33
CD48-202ENST00000368046 CCDC87Q9NVE4 849 aa13□□□□□ -0.33
CD48-202ENST00000368046 ZNF831Q5JPB2 1677 aa12.99□□□□□ -0.33
CD48-202ENST00000368046 KCNQ3O43525 872 aa12.99□□□□□ -0.33
CD48-202ENST00000368046 TMPOP42166 694 aaKnown RBP12.99□□□□□ -0.33
CD48-202ENST00000368046 MSL1Q68DK7 614 aa12.99□□□□□ -0.33
CD48-202ENST00000368046 PNISRQ8TF01 805 aaKnown RBP12.99□□□□□ -0.33
CD48-202ENST00000368046 HEG1Q9ULI3 1381 aa12.98□□□□□ -0.33
CD48-202ENST00000368046 TAF1LQ8IZX4 1826 aa12.98□□□□□ -0.33
CD48-202ENST00000368046 QSER1Q2KHR3 1735 aa12.98□□□□□ -0.33
CD48-202ENST00000368046 LMOD3Q0VAK6 560 aa12.97□□□□□ -0.33
CD48-202ENST00000368046 CCDC146Q8IYE0 955 aa12.97□□□□□ -0.33
CD48-202ENST00000368046 MIS18AQ9NYP9 233 aa12.97□□□□□ -0.33
CD48-202ENST00000368046 SNRPA1P09661 255 aaKnown RBP12.96□□□□□ -0.33
CD48-202ENST00000368046 GYS1P13807 737 aa12.96□□□□□ -0.33
CD48-202ENST00000368046 NEUROD2Q15784 382 aa12.96□□□□□ -0.33
CD48-202ENST00000368046 CCDC184Q52MB2 194 aa12.96□□□□□ -0.33
CD48-202ENST00000368046 ZBTB1Q9Y2K1 713 aa12.96□□□□□ -0.33
CD48-202ENST00000368046 USP16Q9Y5T5 823 aa12.96□□□□□ -0.33
CD48-202ENST00000368046 KCPQ6ZWJ8 1503 aa12.96□□□□□ -0.33
CD48-202ENST00000368046 CANXP27824 592 aaKnown RBP12.95□□□□□ -0.34
CD48-202ENST00000368046 THUMPD2Q9BTF0 503 aaKnown RBP12.95□□□□□ -0.34
CD48-202ENST00000368046 SOS1Q07889 1333 aaPredicted RBP12.94□□□□□ -0.34
CD48-202ENST00000368046 ZPR1O75312 459 aa12.94□□□□□ -0.34
CD48-202ENST00000368046 A1BGP04217 495 aa12.94□□□□□ -0.34
CD48-202ENST00000368046 EIF5P55010 431 aaKnown RBP12.94□□□□□ -0.34
CD48-202ENST00000368046 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
CD48-202ENST00000368046 BABAM1Q9NWV8 329 aa12.94□□□□□ -0.34
CD48-202ENST00000368046 PCDH10Q9P2E7 1040 aa12.94□□□□□ -0.34
CD48-202ENST00000368046 RRP7AQ9Y3A4 280 aaKnown RBP12.94□□□□□ -0.34
CD48-202ENST00000368046 CD2APQ9Y5K6 639 aa12.94□□□□□ -0.34
CD48-202ENST00000368046 A0A087WZG4 1122 aa12.93□□□□□ -0.34
CD48-202ENST00000368046 MMP10P09238 476 aa12.93□□□□□ -0.34
CD48-202ENST00000368046 IL6STP40189 918 aaPredicted RBP12.93□□□□□ -0.34
CD48-202ENST00000368046 EIF4A1P60842 406 aaKnown RBP12.93□□□□□ -0.34
CD48-202ENST00000368046 NPM2Q86SE8 214 aaKnown RBP12.93□□□□□ -0.34
CD48-202ENST00000368046 CREBZFQ9NS37 354 aa12.93□□□□□ -0.34
CD48-202ENST00000368046 SRP68Q9UHB9 627 aaKnown RBP12.93□□□□□ -0.34
CD48-202ENST00000368046 NARFQ9UHQ1 456 aa12.93□□□□□ -0.34
CD48-202ENST00000368046 TRIM35Q9UPQ4 493 aa12.93□□□□□ -0.34
CD48-202ENST00000368046 UBR3Q6ZT12 1888 aa12.93□□□□□ -0.34
CD48-202ENST00000368046 TUBGCP6Q96RT7 1819 aa12.92□□□□□ -0.34
CD48-202ENST00000368046 USP42Q9H9J4 1324 aaKnown RBP12.92□□□□□ -0.34
CD48-202ENST00000368046 PRAMEF22A3QJZ6 481 aa12.92□□□□□ -0.34
CD48-202ENST00000368046 APAF1O14727 1248 aa12.92□□□□□ -0.34
CD48-202ENST00000368046 USPL1Q5W0Q7 1092 aa12.92□□□□□ -0.34
CD48-202ENST00000368046 MRS2Q9HD23 443 aa12.92□□□□□ -0.34
CD48-202ENST00000368046 PARP3Q9Y6F1 533 aa12.92□□□□□ -0.34
CD48-202ENST00000368046 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
CD48-202ENST00000368046 GIGYF1O75420 1035 aaPredicted RBP12.91□□□□□ -0.34
CD48-202ENST00000368046 TM4SF1P30408 202 aa12.91□□□□□ -0.34
CD48-202ENST00000368046 FKBP8Q14318 412 aa12.91□□□□□ -0.34
CD48-202ENST00000368046 TSPYL4Q9UJ04 414 aa12.91□□□□□ -0.34
CD48-202ENST00000368046 CICQ96RK0 1608 aaPredicted RBP12.91□□□□□ -0.34
CD48-202ENST00000368046 TJP1Q07157 1748 aa12.91□□□□□ -0.34
CD48-202ENST00000368046 COL24A1Q17RW2 1714 aa12.91□□□□□ -0.34
CD48-202ENST00000368046 CHL1O00533 1208 aa12.9□□□□□ -0.34
CD48-202ENST00000368046 NLGN2Q8NFZ4 835 aa12.9□□□□□ -0.34
CD48-202ENST00000368046 COL15A1P39059 1388 aa12.9□□□□□ -0.34
CD48-202ENST00000368046 SIPA1L3O60292 1781 aaPredicted RBP12.89□□□□□ -0.35
CD48-202ENST00000368046 MYH14Q7Z406 1995 aaKnown RBP12.89□□□□□ -0.35
CD48-202ENST00000368046 BCL2L12Q9HB09 334 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms