RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.54□□□□□ -0.08
USF1-201ENST00000368019 SSFA2P28290 1259 aa14.54□□□□□ -0.08
USF1-201ENST00000368019 ITPK1Q13572 414 aa14.54□□□□□ -0.08
USF1-201ENST00000368019 CCDC146Q8IYE0 955 aa14.54□□□□□ -0.08
USF1-201ENST00000368019 TMOD3Q9NYL9 352 aa14.54□□□□□ -0.08
USF1-201ENST00000368019 CEP350Q5VT06 3117 aa14.54□□□□□ -0.08
USF1-201ENST00000368019 FRAT2O75474 233 aaPredicted RBP14.53□□□□□ -0.08
USF1-201ENST00000368019 RARSP54136 660 aaKnown RBP14.53□□□□□ -0.08
USF1-201ENST00000368019 ATG3Q9NT62 314 aa14.53□□□□□ -0.08
USF1-201ENST00000368019 IGSF1Q8N6C5 1336 aa14.52□□□□□ -0.08
USF1-201ENST00000368019 GIGYF1O75420 1035 aaPredicted RBP14.52□□□□□ -0.09
USF1-201ENST00000368019 PHF14O94880 888 aa14.52□□□□□ -0.09
USF1-201ENST00000368019 SLC4A3P48751 1232 aa14.52□□□□□ -0.09
USF1-201ENST00000368019 TBC1D32Q96NH3 1257 aa14.52□□□□□ -0.09
USF1-201ENST00000368019 RWDD1Q9H446 243 aaPredicted RBP14.52□□□□□ -0.09
USF1-201ENST00000368019 BRPF3Q9ULD4 1205 aa14.52□□□□□ -0.09
USF1-201ENST00000368019 KIF13BQ9NQT8 1826 aa14.52□□□□□ -0.09
USF1-201ENST00000368019 MYH14Q7Z406 1995 aaKnown RBP14.51□□□□□ -0.09
USF1-201ENST00000368019 KDRP35968 1356 aa14.51□□□□□ -0.09
USF1-201ENST00000368019 CANXP27824 592 aaKnown RBP14.51□□□□□ -0.09
USF1-201ENST00000368019 CFAP53Q96M91 514 aa14.51□□□□□ -0.09
USF1-201ENST00000368019 MYH16Q9H6N6 1097 aa14.51□□□□□ -0.09
USF1-201ENST00000368019 ANTXR1Q9H6X2 564 aa14.51□□□□□ -0.09
USF1-201ENST00000368019 COL5A3P25940 1745 aaPredicted RBP14.51□□□□□ -0.09
USF1-201ENST00000368019 ATP6V1AP38606 617 aa14.5□□□□□ -0.09
USF1-201ENST00000368019 TNNT2P45379 298 aaPredicted RBP14.5□□□□□ -0.09
USF1-201ENST00000368019 SLC4A9Q96Q91 983 aa14.5□□□□□ -0.09
USF1-201ENST00000368019 RSPH6AQ9H0K4 717 aa14.5□□□□□ -0.09
USF1-201ENST00000368019 KIAA1551Q9HCM1 1747 aa14.49□□□□□ -0.09
USF1-201ENST00000368019 ADCY9O60503 1353 aa14.49□□□□□ -0.09
USF1-201ENST00000368019 ERVV-2B6SEH9 535 aa14.49□□□□□ -0.09
USF1-201ENST00000368019 GNPATO15228 680 aa14.49□□□□□ -0.09
USF1-201ENST00000368019 COG6Q9Y2V7 657 aa14.49□□□□□ -0.09
USF1-201ENST00000368019 ATP10DQ9P241 1426 aa14.49□□□□□ -0.09
USF1-201ENST00000368019 MORC1Q86VD1 984 aa14.48□□□□□ -0.09
USF1-201ENST00000368019 ISY1Q9ULR0 285 aaKnown RBP14.48□□□□□ -0.09
USF1-201ENST00000368019 IL16Q14005 1332 aa14.47□□□□□ -0.09
USF1-201ENST00000368019 RC3H1Q5TC82 1133 aaKnown RBP14.47□□□□□ -0.09
USF1-201ENST00000368019 DCAF5Q96JK2 942 aa14.47□□□□□ -0.09
USF1-201ENST00000368019 KDM6AO15550 1401 aaPredicted RBP14.47□□□□□ -0.09
USF1-201ENST00000368019 CICQ96RK0 1608 aaPredicted RBP14.46□□□□□ -0.09
USF1-201ENST00000368019 HSP90AB1P08238 724 aaKnown RBP14.46□□□□□ -0.09
USF1-201ENST00000368019 MVPQ14764 893 aaKnown RBP14.46□□□□□ -0.09
USF1-201ENST00000368019 PLEKHO1Q53GL0 409 aaPredicted RBP14.46□□□□□ -0.09
USF1-201ENST00000368019 PANK1Q8TE04 598 aa14.46□□□□□ -0.09
USF1-201ENST00000368019 PDZRN3Q9UPQ7 1066 aa14.46□□□□□ -0.09
USF1-201ENST00000368019 N4BP2Q86UW6 1770 aaPredicted RBP14.46□□□□□ -0.09
USF1-201ENST00000368019 SCN11AQ9UI33 1791 aa14.45□□□□□ -0.1
USF1-201ENST00000368019 MMP10P09238 476 aa14.45□□□□□ -0.1
USF1-201ENST00000368019 C4AP0C0L4 1744 aa14.45□□□□□ -0.1
USF1-201ENST00000368019 BRCA1P38398 1863 aaKnown RBP14.45□□□□□ -0.1
USF1-201ENST00000368019 HDAC1Q13547 482 aaPredicted RBP14.45□□□□□ -0.1
USF1-201ENST00000368019 AMOTQ4VCS5 1084 aa14.45□□□□□ -0.1
USF1-201ENST00000368019 ZKSCAN2Q63HK3 967 aa14.45□□□□□ -0.1
USF1-201ENST00000368019 COL3A1P02461 1466 aaPredicted RBP14.44□□□□□ -0.1
USF1-201ENST00000368019 CNTNAP4Q9C0A0 1308 aa14.44□□□□□ -0.1
USF1-201ENST00000368019 TRAPPC3LQ5T215 181 aa14.44□□□□□ -0.1
USF1-201ENST00000368019 ZNF530Q6P9A1 599 aaPredicted RBP14.44□□□□□ -0.1
USF1-201ENST00000368019 AEBP1Q8IUX7 1158 aa14.44□□□□□ -0.1
USF1-201ENST00000368019 ARHGEF1Q92888 912 aaKnown RBP14.44□□□□□ -0.1
USF1-201ENST00000368019 RTN4Q9NQC3 1192 aaKnown RBP14.44□□□□□ -0.1
USF1-201ENST00000368019 RTCBQ9Y3I0 505 aaKnown RBP14.44□□□□□ -0.1
USF1-201ENST00000368019 PXDNLA1KZ92 1463 aa14.44□□□□□ -0.1
USF1-201ENST00000368019 RPS6KA4O75676 772 aa14.43□□□□□ -0.1
USF1-201ENST00000368019 PRKCSHP14314 528 aaPredicted RBP14.43□□□□□ -0.1
USF1-201ENST00000368019 ADRA2BP18089 450 aa14.43□□□□□ -0.1
USF1-201ENST00000368019 NLGN1Q8N2Q7 840 aa14.43□□□□□ -0.1
USF1-201ENST00000368019 RBM42Q9BTD8 480 aaKnown RBP14.43□□□□□ -0.1
USF1-201ENST00000368019 WWC3Q9ULE0 1092 aa14.43□□□□□ -0.1
USF1-201ENST00000368019 PCDHB15Q9Y5E8 787 aa14.43□□□□□ -0.1
USF1-201ENST00000368019 C10orf71Q711Q0 1435 aa14.42□□□□□ -0.1
USF1-201ENST00000368019 SEC24BO95487 1268 aa14.42□□□□□ -0.1
USF1-201ENST00000368019 TBC1D2Q9BYX2 928 aa14.42□□□□□ -0.1
USF1-201ENST00000368019 GPBP1L1Q9HC44 474 aaPredicted RBP14.42□□□□□ -0.1
USF1-201ENST00000368019 CHMP5Q9NZZ3 219 aa14.42□□□□□ -0.1
USF1-201ENST00000368019 TJP1Q07157 1748 aa14.41□□□□□ -0.1
USF1-201ENST00000368019 FSD2A1L4K1 749 aa14.41□□□□□ -0.1
USF1-201ENST00000368019 GYS1P13807 737 aa14.41□□□□□ -0.1
USF1-201ENST00000368019 IL13P35225 146 aa14.41□□□□□ -0.1
USF1-201ENST00000368019 MTHFSP49914 203 aa14.41□□□□□ -0.1
USF1-201ENST00000368019 CABP4P57796 275 aa14.41□□□□□ -0.1
USF1-201ENST00000368019 TGFB2P61812 414 aa14.41□□□□□ -0.1
USF1-201ENST00000368019 DDX19BQ9UMR2 479 aa14.41□□□□□ -0.1
USF1-201ENST00000368019 ADAMTS7Q9UKP4 1686 aa14.4□□□□□ -0.1
USF1-201ENST00000368019 PTMSP20962 102 aa14.4□□□□□ -0.1
USF1-201ENST00000368019 SULT6B1Q6IMI4 303 aa14.4□□□□□ -0.1
USF1-201ENST00000368019 SMC5Q8IY18 1101 aa14.4□□□□□ -0.1
USF1-201ENST00000368019 DZIP1LQ8IYY4 767 aaKnown RBP14.4□□□□□ -0.1
USF1-201ENST00000368019 NFATC2IPQ8NCF5 419 aa14.4□□□□□ -0.1
USF1-201ENST00000368019 ARFGEF1Q9Y6D6 1849 aa14.4□□□□□ -0.1
USF1-201ENST00000368019 EIF5BO60841 1220 aaKnown RBP14.39□□□□□ -0.11
USF1-201ENST00000368019 RLBP1P12271 317 aa14.39□□□□□ -0.11
USF1-201ENST00000368019 ZNF428Q96B54 188 aa14.39□□□□□ -0.11
USF1-201ENST00000368019 CIZ1Q9ULV3 898 aaPredicted RBP14.39□□□□□ -0.11
USF1-201ENST00000368019 KIF16BQ96L93 1317 aa14.39□□□□□ -0.11
USF1-201ENST00000368019 A0A0G2JLW4 131 aa14.38□□□□□ -0.11
USF1-201ENST00000368019 DDX11L8A8MPP1 907 aa14.38□□□□□ -0.11
USF1-201ENST00000368019 RFC4P35249 363 aa14.38□□□□□ -0.11
USF1-201ENST00000368019 BRPF1P55201 1214 aaPredicted RBP14.38□□□□□ -0.11
USF1-201ENST00000368019 C1orf141Q5JVX7 400 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms