RNA–Protein interactions for RNA: ENST00000367563.7

LINC00272-201, long intergenic non-protein coding RNA 272, humanhuman

TSL 1 (best) BASIC

Gene LINC00272, Length 740 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00272-201ENST00000367563 C9orf131Q5VYM1 1079 aa11.96□□□□□ -0.49
LINC00272-201ENST00000367563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.96□□□□□ -0.49
LINC00272-201ENST00000367563 COL13A1Q5TAT6 717 aaPredicted RBP11.95□□□□□ -0.5
LINC00272-201ENST00000367563 CCDC87Q9NVE4 849 aa11.95□□□□□ -0.5
LINC00272-201ENST00000367563 POLKQ9UBT6 870 aa11.95□□□□□ -0.5
LINC00272-201ENST00000367563 N4BP2Q86UW6 1770 aaPredicted RBP11.95□□□□□ -0.5
LINC00272-201ENST00000367563 NPC1L1Q9UHC9 1359 aa11.94□□□□□ -0.5
LINC00272-201ENST00000367563 TNNT2P45379 298 aaPredicted RBP11.94□□□□□ -0.5
LINC00272-201ENST00000367563 EIF4A2Q14240 407 aaKnown RBP11.94□□□□□ -0.5
LINC00272-201ENST00000367563 RBM46Q8TBY0 533 aaKnown RBP11.94□□□□□ -0.5
LINC00272-201ENST00000367563 SRP68Q9UHB9 627 aaKnown RBP11.94□□□□□ -0.5
LINC00272-201ENST00000367563 PARP3Q9Y6F1 533 aa11.94□□□□□ -0.5
LINC00272-201ENST00000367563 KCPQ6ZWJ8 1503 aa11.93□□□□□ -0.5
LINC00272-201ENST00000367563 RPS6KA4O75676 772 aa11.93□□□□□ -0.5
LINC00272-201ENST00000367563 RFC4P35249 363 aa11.93□□□□□ -0.5
LINC00272-201ENST00000367563 RC3H1Q5TC82 1133 aaKnown RBP11.93□□□□□ -0.5
LINC00272-201ENST00000367563 MORC1Q86VD1 984 aa11.93□□□□□ -0.5
LINC00272-201ENST00000367563 KLRG1Q96E93 195 aa11.93□□□□□ -0.5
LINC00272-201ENST00000367563 CNTNAP4Q9C0A0 1308 aa11.92□□□□□ -0.5
LINC00272-201ENST00000367563 CHRNA5P30532 468 aa11.92□□□□□ -0.5
LINC00272-201ENST00000367563 DDR1Q08345 913 aa11.92□□□□□ -0.5
LINC00272-201ENST00000367563 C16orf71Q8IYS4 520 aaPredicted RBP11.92□□□□□ -0.5
LINC00272-201ENST00000367563 RRAGCQ9HB90 399 aa11.92□□□□□ -0.5
LINC00272-201ENST00000367563 RNF181Q9P0P0 153 aa11.92□□□□□ -0.5
LINC00272-201ENST00000367563 KIF13BQ9NQT8 1826 aa11.92□□□□□ -0.5
LINC00272-201ENST00000367563 C4AP0C0L4 1744 aa11.91□□□□□ -0.5
LINC00272-201ENST00000367563 ERVV-2B6SEH9 535 aa11.91□□□□□ -0.5
LINC00272-201ENST00000367563 PTCD1O75127 700 aaKnown RBP11.91□□□□□ -0.5
LINC00272-201ENST00000367563 JMYQ8N9B5 988 aa11.91□□□□□ -0.5
LINC00272-201ENST00000367563 DCAF5Q96JK2 942 aa11.91□□□□□ -0.5
LINC00272-201ENST00000367563 TSPYL2Q9H2G4 693 aaPredicted RBP11.91□□□□□ -0.5
LINC00272-201ENST00000367563 PIM2Q9P1W9 311 aa11.91□□□□□ -0.5
LINC00272-201ENST00000367563 KDM6AO15550 1401 aaPredicted RBP11.91□□□□□ -0.5
LINC00272-201ENST00000367563 CRKLP46109 303 aaKnown RBP11.9□□□□□ -0.5
LINC00272-201ENST00000367563 CABP4P57796 275 aa11.9□□□□□ -0.5
LINC00272-201ENST00000367563 DALRD3Q5D0E6 543 aaKnown RBP11.9□□□□□ -0.5
LINC00272-201ENST00000367563 WDR90Q96KV7 1748 aa11.89□□□□□ -0.51
LINC00272-201ENST00000367563 PER1O15534 1290 aaPredicted RBP11.89□□□□□ -0.51
LINC00272-201ENST00000367563 FSTL1Q12841 308 aa11.89□□□□□ -0.51
LINC00272-201ENST00000367563 ZNF530Q6P9A1 599 aaPredicted RBP11.89□□□□□ -0.51
LINC00272-201ENST00000367563 PLEKHG2Q9H7P9 1386 aa11.89□□□□□ -0.51
LINC00272-201ENST00000367563 KDM2BQ8NHM5 1336 aa11.88□□□□□ -0.51
LINC00272-201ENST00000367563 USP42Q9H9J4 1324 aaKnown RBP11.88□□□□□ -0.51
LINC00272-201ENST00000367563 CHRM1P11229 460 aaPredicted RBP11.88□□□□□ -0.51
LINC00272-201ENST00000367563 RASSF7Q02833 373 aa11.88□□□□□ -0.51
LINC00272-201ENST00000367563 AEBP1Q8IUX7 1158 aa11.88□□□□□ -0.51
LINC00272-201ENST00000367563 POLRMTO00411 1230 aaKnown RBP11.87□□□□□ -0.51
LINC00272-201ENST00000367563 PRELPP51888 382 aa11.87□□□□□ -0.51
LINC00272-201ENST00000367563 PLEKHO1Q53GL0 409 aaPredicted RBP11.87□□□□□ -0.51
LINC00272-201ENST00000367563 CC2D1BQ5T0F9 858 aaKnown RBP11.87□□□□□ -0.51
LINC00272-201ENST00000367563 INTS5Q6P9B9 1019 aaKnown RBP11.87□□□□□ -0.51
LINC00272-201ENST00000367563 NFATC2IPQ8NCF5 419 aa11.87□□□□□ -0.51
LINC00272-201ENST00000367563 COL5A3P25940 1745 aaPredicted RBP11.86□□□□□ -0.51
LINC00272-201ENST00000367563 HSP90AB1P08238 724 aaKnown RBP11.86□□□□□ -0.51
LINC00272-201ENST00000367563 CD44P16070 742 aaKnown RBP11.86□□□□□ -0.51
LINC00272-201ENST00000367563 TM4SF1P30408 202 aa11.86□□□□□ -0.51
LINC00272-201ENST00000367563 MTHFSP49914 203 aa11.86□□□□□ -0.51
LINC00272-201ENST00000367563 TNS4Q8IZW8 715 aa11.86□□□□□ -0.51
LINC00272-201ENST00000367563 ZNF831Q5JPB2 1677 aa11.85□□□□□ -0.51
LINC00272-201ENST00000367563 USPL1Q5W0Q7 1092 aa11.85□□□□□ -0.51
LINC00272-201ENST00000367563 SMC1BQ8NDV3 1235 aa11.85□□□□□ -0.51
LINC00272-201ENST00000367563 BRCA1P38398 1863 aaKnown RBP11.85□□□□□ -0.51
LINC00272-201ENST00000367563 AMOTQ4VCS5 1084 aa11.84□□□□□ -0.51
LINC00272-201ENST00000367563 DNAJC10Q8IXB1 793 aa11.84□□□□□ -0.51
LINC00272-201ENST00000367563 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
LINC00272-201ENST00000367563 C1orf141Q5JVX7 400 aa11.83□□□□□ -0.52
LINC00272-201ENST00000367563 MYH14Q7Z406 1995 aaKnown RBP11.83□□□□□ -0.52
LINC00272-201ENST00000367563 RGL2O15211 777 aa11.82□□□□□ -0.52
LINC00272-201ENST00000367563 NFIXQ14938 502 aa11.82□□□□□ -0.52
LINC00272-201ENST00000367563 SULT6B1Q6IMI4 303 aa11.82□□□□□ -0.52
LINC00272-201ENST00000367563 TJP1Q07157 1748 aa11.82□□□□□ -0.52
LINC00272-201ENST00000367563 SOS1Q07889 1333 aaPredicted RBP11.82□□□□□ -0.52
LINC00272-201ENST00000367563 ARFGEF1Q9Y6D6 1849 aa11.81□□□□□ -0.52
LINC00272-201ENST00000367563 GLTPD2A6NH11 291 aa11.81□□□□□ -0.52
LINC00272-201ENST00000367563 ZPR1O75312 459 aa11.81□□□□□ -0.52
LINC00272-201ENST00000367563 HSPA1AP0DMV8 641 aaKnown RBP11.81□□□□□ -0.52
LINC00272-201ENST00000367563 HSPA1BP0DMV9 641 aaKnown RBP11.81□□□□□ -0.52
LINC00272-201ENST00000367563 PYGBP11216 843 aa11.81□□□□□ -0.52
LINC00272-201ENST00000367563 SLC39A6Q13433 755 aa11.81□□□□□ -0.52
LINC00272-201ENST00000367563 BCL2L12Q9HB09 334 aa11.81□□□□□ -0.52
LINC00272-201ENST00000367563 LGR6Q9HBX8 967 aa11.81□□□□□ -0.52
LINC00272-201ENST00000367563 ADAMTS7Q9UKP4 1686 aa11.81□□□□□ -0.52
LINC00272-201ENST00000367563 CARMIL3Q8ND23 1372 aa11.8□□□□□ -0.52
LINC00272-201ENST00000367563 POTECB2RU33 542 aa11.8□□□□□ -0.52
LINC00272-201ENST00000367563 NFKBIEO00221 500 aa11.8□□□□□ -0.52
LINC00272-201ENST00000367563 CYP19A1P11511 503 aaPredicted RBP11.8□□□□□ -0.52
LINC00272-201ENST00000367563 VEGFAP15692 232 aaPredicted RBP11.8□□□□□ -0.52
LINC00272-201ENST00000367563 LMNB1P20700 586 aa11.8□□□□□ -0.52
LINC00272-201ENST00000367563 CNGB1Q14028 1251 aaPredicted RBP11.8□□□□□ -0.52
LINC00272-201ENST00000367563 CFAP53Q96M91 514 aa11.8□□□□□ -0.52
LINC00272-201ENST00000367563 COL3A1P02461 1466 aaPredicted RBP11.8□□□□□ -0.52
LINC00272-201ENST00000367563 SERPINB2P05120 415 aa11.79□□□□□ -0.52
LINC00272-201ENST00000367563 C2CD5Q86YS7 1000 aa11.79□□□□□ -0.52
LINC00272-201ENST00000367563 NARFQ9UHQ1 456 aa11.79□□□□□ -0.52
LINC00272-201ENST00000367563 ZBTB1Q9Y2K1 713 aa11.79□□□□□ -0.52
LINC00272-201ENST00000367563 PCNTO95613 3336 aa11.79□□□□□ -0.52
LINC00272-201ENST00000367563 TNRC6CQ9HCJ0 1690 aaKnown RBP11.78□□□□□ -0.52
LINC00272-201ENST00000367563 DIAPH1O60610 1272 aaKnown RBP11.78□□□□□ -0.52
LINC00272-201ENST00000367563 IL13P35225 146 aa11.78□□□□□ -0.52
LINC00272-201ENST00000367563 BICDL1Q6ZP65 573 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms