RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 ATP8B2P98198 1209 aa9.83□□□□□ -0.84
CD46-208ENST00000367042 NOLC1Q14978 699 aaKnown RBP eCLIP9.83□□□□□ -0.842e-8■■■□□ 18.1
CD46-208ENST00000367042 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.83□□□□□ -0.84
CD46-208ENST00000367042 CNTROBQ8N137 903 aa9.82□□□□□ -0.84
CD46-208ENST00000367042 USHBP1Q8N6Y0 703 aa9.82□□□□□ -0.84
CD46-208ENST00000367042 INTS4Q96HW7 963 aaKnown RBP9.82□□□□□ -0.84
CD46-208ENST00000367042 JAKMIP1Q96N16 626 aaKnown RBP9.82□□□□□ -0.84
CD46-208ENST00000367042 SLC26A8Q96RN1 970 aa9.82□□□□□ -0.84
CD46-208ENST00000367042 ZHX1Q9UKY1 873 aaPredicted RBP9.82□□□□□ -0.84
CD46-208ENST00000367042 ATP6V1DQ9Y5K8 247 aa9.82□□□□□ -0.84
CD46-208ENST00000367042 CDK12Q9NYV4 1490 aaPredicted RBP9.82□□□□□ -0.84
CD46-208ENST00000367042 SYT1P21579 422 aa9.82□□□□□ -0.84
CD46-208ENST00000367042 ANAPC15P60006 121 aa9.82□□□□□ -0.84
CD46-208ENST00000367042 DNM1Q05193 864 aaKnown RBP9.82□□□□□ -0.84
CD46-208ENST00000367042 OSBPL3Q9H4L5 887 aa9.82□□□□□ -0.84
CD46-208ENST00000367042 PHAXQ9H814 394 aaKnown RBP9.82□□□□□ -0.84
CD46-208ENST00000367042 METP08581 1390 aa9.82□□□□□ -0.84
CD46-208ENST00000367042 ZSCAN22P10073 491 aaPredicted RBP9.82□□□□□ -0.84
CD46-208ENST00000367042 NLRP6P59044 892 aa9.82□□□□□ -0.84
CD46-208ENST00000367042 CUL4AQ13619 759 aa9.82□□□□□ -0.84
CD46-208ENST00000367042 PRPF40BQ6NWY9 871 aaKnown RBP9.82□□□□□ -0.84
CD46-208ENST00000367042 FAM184AQ8NB25 1140 aa9.82□□□□□ -0.84
CD46-208ENST00000367042 ATP7BP35670 1465 aa9.81□□□□□ -0.84
CD46-208ENST00000367042 TERF1P54274 439 aa9.81□□□□□ -0.84
CD46-208ENST00000367042 NECAB1Q8N987 351 aa9.81□□□□□ -0.84
CD46-208ENST00000367042 GJB2P29033 226 aa9.81□□□□□ -0.84
CD46-208ENST00000367042 MTERF4Q7Z6M4 381 aaKnown RBP9.81□□□□□ -0.84
CD46-208ENST00000367042 TCEANC2Q96MN5 208 aa9.81□□□□□ -0.84
CD46-208ENST00000367042 LIMCH1Q9UPQ0 1083 aa9.81□□□□□ -0.84
CD46-208ENST00000367042 PRR36Q9H6K5 1346 aa9.81□□□□□ -0.84
CD46-208ENST00000367042 HDGFP51858 240 aaKnown RBP9.81□□□□□ -0.84
CD46-208ENST00000367042 RHPN1Q8TCX5 695 aa9.81□□□□□ -0.84
CD46-208ENST00000367042 KNDC1Q76NI1 1749 aa9.8□□□□□ -0.84
CD46-208ENST00000367042 AATKQ6ZMQ8 1374 aa9.8□□□□□ -0.84
CD46-208ENST00000367042 KIAA0232Q92628 1395 aa9.8□□□□□ -0.84
CD46-208ENST00000367042 RGS12O14924 1447 aa9.8□□□□□ -0.84
CD46-208ENST00000367042 UBE2HP62256 183 aa9.8□□□□□ -0.84
CD46-208ENST00000367042 STK3Q13188 491 aa9.8□□□□□ -0.84
CD46-208ENST00000367042 FAM173BQ6P4H8 233 aa9.8□□□□□ -0.84
CD46-208ENST00000367042 RASEFQ8IZ41 740 aa9.8□□□□□ -0.84
CD46-208ENST00000367042 EYA1Q99502 592 aa9.8□□□□□ -0.84
CD46-208ENST00000367042 SNX14Q9Y5W7 946 aa9.8□□□□□ -0.84
CD46-208ENST00000367042 GNAT3A8MTJ3 354 aa9.8□□□□□ -0.84
CD46-208ENST00000367042 CKAP2LQ8IYA6 745 aa9.8□□□□□ -0.84
CD46-208ENST00000367042 PDRG1Q9NUG6 133 aa9.8□□□□□ -0.84
CD46-208ENST00000367042 TAOK2Q9UL54 1235 aa9.8□□□□□ -0.84
CD46-208ENST00000367042 KIF3AQ9Y496 699 aa9.8□□□□□ -0.84
CD46-208ENST00000367042 ANKRD26Q9UPS8 1709 aa9.8□□□□□ -0.84
CD46-208ENST00000367042 KIF20BQ96Q89 1820 aa9.79□□□□□ -0.84
CD46-208ENST00000367042 CPS1P31327 1500 aa9.79□□□□□ -0.84
CD46-208ENST00000367042 SPDYE4A6NLX3 237 aa9.79□□□□□ -0.84
CD46-208ENST00000367042 F13A1P00488 732 aa9.79□□□□□ -0.84
CD46-208ENST00000367042 IFIT2P09913 472 aaKnown RBP9.79□□□□□ -0.84
CD46-208ENST00000367042 FOSBP53539 338 aa9.79□□□□□ -0.84
CD46-208ENST00000367042 HMGN5P82970 282 aaKnown RBP9.79□□□□□ -0.84
CD46-208ENST00000367042 TAF7Q15545 349 aaPredicted RBP9.79□□□□□ -0.84
CD46-208ENST00000367042 C9orf78Q9NZ63 289 aaPredicted RBP9.79□□□□□ -0.84
CD46-208ENST00000367042 TNRQ92752 1358 aa9.79□□□□□ -0.84
CD46-208ENST00000367042 GOLGA6L6A8MZA4 724 aa9.79□□□□□ -0.84
CD46-208ENST00000367042 HSPA4P34932 840 aa9.79□□□□□ -0.84
CD46-208ENST00000367042 USP44Q9H0E7 712 aa9.79□□□□□ -0.84
CD46-208ENST00000367042 NAP1L2Q9ULW6 460 aaPredicted RBP9.79□□□□□ -0.84
CD46-208ENST00000367042 CCDC9Q9Y3X0 531 aaKnown RBP9.79□□□□□ -0.84
CD46-208ENST00000367042 ZKSCAN1P17029 563 aaPredicted RBP9.79□□□□□ -0.84
CD46-208ENST00000367042 LARP1BQ659C4 914 aaKnown RBP9.79□□□□□ -0.84
CD46-208ENST00000367042 CLASRPQ8N2M8 674 aaKnown RBP9.79□□□□□ -0.84
CD46-208ENST00000367042 PIBF1Q8WXW3 757 aa9.79□□□□□ -0.84
CD46-208ENST00000367042 ZNF592Q92610 1267 aa9.79□□□□□ -0.84
CD46-208ENST00000367042 SOS1Q07889 1333 aaPredicted RBP9.79□□□□□ -0.84
CD46-208ENST00000367042 CPSF1Q10570 1443 aaKnown RBP9.79□□□□□ -0.84
CD46-208ENST00000367042 LETM1O95202 739 aaPredicted RBP9.78□□□□□ -0.84
CD46-208ENST00000367042 LARGE1O95461 756 aa9.78□□□□□ -0.84
CD46-208ENST00000367042 NBPF7P0C2Y1 421 aaPredicted RBP9.78□□□□□ -0.84
CD46-208ENST00000367042 FGD1P98174 961 aa9.78□□□□□ -0.84
CD46-208ENST00000367042 PPP4R3BQ5MIZ7 849 aa9.78□□□□□ -0.84
CD46-208ENST00000367042 KIF1BPQ96EK5 621 aa9.78□□□□□ -0.84
CD46-208ENST00000367042 TFIP11Q9UBB9 837 aaKnown RBP9.78□□□□□ -0.84
CD46-208ENST00000367042 CYP46A1Q9Y6A2 500 aa9.78□□□□□ -0.84
CD46-208ENST00000367042 KDM4AO75164 1064 aa9.78□□□□□ -0.84
CD46-208ENST00000367042 C3P01024 1663 aa9.78□□□□□ -0.84
CD46-208ENST00000367042 RUFY3Q7L099 469 aa9.78□□□□□ -0.84
CD46-208ENST00000367042 MYRIPQ8NFW9 859 aa9.78□□□□□ -0.84
CD46-208ENST00000367042 RUFY2Q8WXA3 655 aa9.78□□□□□ -0.84
CD46-208ENST00000367042 PI4KAP2A4QPH2 592 aa9.77□□□□□ -0.84
CD46-208ENST00000367042 SGSM2O43147 1006 aa9.77□□□□□ -0.84
CD46-208ENST00000367042 CCDC192P0DO97 292 aa9.77□□□□□ -0.84
CD46-208ENST00000367042 PI4KAP1Q8N8J0 262 aa9.77□□□□□ -0.84
CD46-208ENST00000367042 BICD2Q8TD16 824 aa9.77□□□□□ -0.84
CD46-208ENST00000367042 FBXW7Q969H0 707 aa9.77□□□□□ -0.84
CD46-208ENST00000367042 RAD50Q92878 1312 aa9.77□□□□□ -0.85
CD46-208ENST00000367042 CEBPZQ03701 1054 aaKnown RBP9.77□□□□□ -0.85
CD46-208ENST00000367042 UVSSAQ2YD98 709 aa9.77□□□□□ -0.85
CD46-208ENST00000367042 TRIM5Q9C035 493 aa9.77□□□□□ -0.85
CD46-208ENST00000367042 SIL1Q9H173 461 aa9.77□□□□□ -0.85
CD46-208ENST00000367042 TECPR2O15040 1411 aa9.77□□□□□ -0.85
CD46-208ENST00000367042 TMEM2Q9UHN6 1383 aa9.77□□□□□ -0.85
CD46-208ENST00000367042 IGSF3O75054 1194 aa9.77□□□□□ -0.85
CD46-208ENST00000367042 AIMP1Q12904 312 aaKnown RBP9.77□□□□□ -0.85
CD46-208ENST00000367042 GPATCH3Q96I76 525 aa9.77□□□□□ -0.85
CD46-208ENST00000367042 PA2G4Q9UQ80 394 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms