RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 NBPF14Q5TI25 921 aa13.76□□□□□ -0.21
H3F3A-202ENST00000366814 IFNLR1Q8IU57 520 aaPredicted RBP13.76□□□□□ -0.21
H3F3A-202ENST00000366814 C8orf58Q8NAV2 365 aa13.76□□□□□ -0.21
H3F3A-202ENST00000366814 GNAT3A8MTJ3 354 aa13.75□□□□□ -0.21
H3F3A-202ENST00000366814 R3HDM1Q15032 1099 aaKnown RBP13.75□□□□□ -0.21
H3F3A-202ENST00000366814 HDAC1Q13547 482 aaPredicted RBP13.74□□□□□ -0.21
H3F3A-202ENST00000366814 TSPYL4Q9UJ04 414 aa13.74□□□□□ -0.21
H3F3A-202ENST00000366814 MEGF6O75095 1541 aa13.74□□□□□ -0.21
H3F3A-202ENST00000366814 MAP3K5Q99683 1374 aa13.73□□□□□ -0.21
H3F3A-202ENST00000366814 SKAP1Q86WV1 359 aa13.73□□□□□ -0.21
H3F3A-202ENST00000366814 ZBTB40Q9NUA8 1239 aa13.73□□□□□ -0.21
H3F3A-202ENST00000366814 SYTL4Q96C24 671 aaPredicted RBP13.72□□□□□ -0.21
H3F3A-202ENST00000366814 BABAM1Q9NWV8 329 aa13.72□□□□□ -0.21
H3F3A-202ENST00000366814 RREB1Q92766 1687 aa13.72□□□□□ -0.21
H3F3A-202ENST00000366814 ABCC4O15439 1325 aa13.72□□□□□ -0.21
H3F3A-202ENST00000366814 NHSQ6T4R5 1651 aa13.71□□□□□ -0.21
H3F3A-202ENST00000366814 IPO9Q96P70 1041 aaKnown RBP13.71□□□□□ -0.21
H3F3A-202ENST00000366814 PTPRCP08575 1304 aa13.71□□□□□ -0.21
H3F3A-202ENST00000366814 SOS1Q07889 1333 aaPredicted RBP13.71□□□□□ -0.21
H3F3A-202ENST00000366814 NUP188Q5SRE5 1749 aa13.71□□□□□ -0.22
H3F3A-202ENST00000366814 PRIM1P49642 420 aaKnown RBP13.7□□□□□ -0.22
H3F3A-202ENST00000366814 TXNRD1Q16881 649 aa13.7□□□□□ -0.22
H3F3A-202ENST00000366814 NPM2Q86SE8 214 aaKnown RBP13.7□□□□□ -0.22
H3F3A-202ENST00000366814 RGPD3A6NKT7 1758 aaPredicted RBP13.7□□□□□ -0.22
H3F3A-202ENST00000366814 RGPD4Q7Z3J3 1758 aa13.7□□□□□ -0.22
H3F3A-202ENST00000366814 VIRMAQ69YN4 1812 aaKnown RBP13.7□□□□□ -0.22
H3F3A-202ENST00000366814 PDZRN3Q9UPQ7 1066 aa13.7□□□□□ -0.22
H3F3A-202ENST00000366814 BTAF1O14981 1849 aa13.69□□□□□ -0.22
H3F3A-202ENST00000366814 SHANK3Q9BYB0 1731 aa13.69□□□□□ -0.22
H3F3A-202ENST00000366814 PCDH11XQ9BZA7 1347 aa13.69□□□□□ -0.22
H3F3A-202ENST00000366814 PCDH11YQ9BZA8 1340 aa13.69□□□□□ -0.22
H3F3A-202ENST00000366814 SPG7Q9UQ90 795 aa13.69□□□□□ -0.22
H3F3A-202ENST00000366814 CACNB1Q02641 598 aaPredicted RBP13.68□□□□□ -0.22
H3F3A-202ENST00000366814 AMOTQ4VCS5 1084 aa13.68□□□□□ -0.22
H3F3A-202ENST00000366814 PLEKHO1Q53GL0 409 aaPredicted RBP13.68□□□□□ -0.22
H3F3A-202ENST00000366814 STK31Q9BXU1 1019 aa13.68□□□□□ -0.22
H3F3A-202ENST00000366814 ZBTB7BO15156 539 aaPredicted RBP13.67□□□□□ -0.22
H3F3A-202ENST00000366814 TAF7Q15545 349 aaPredicted RBP13.67□□□□□ -0.22
H3F3A-202ENST00000366814 C8orf34Q49A92 452 aa13.67□□□□□ -0.22
H3F3A-202ENST00000366814 DDRGK1Q96HY6 314 aa13.67□□□□□ -0.22
H3F3A-202ENST00000366814 CHMP4AQ9BY43 222 aa13.67□□□□□ -0.22
H3F3A-202ENST00000366814 ZBTB47Q9UFB7 747 aaPredicted RBP13.67□□□□□ -0.22
H3F3A-202ENST00000366814 SSUH2Q9Y2M2 353 aa13.67□□□□□ -0.22
H3F3A-202ENST00000366814 NOP58Q9Y2X3 529 aaKnown RBP13.67□□□□□ -0.22
H3F3A-202ENST00000366814 DOT1LQ8TEK3 1739 aa13.67□□□□□ -0.22
H3F3A-202ENST00000366814 CYP27B1O15528 508 aa13.66□□□□□ -0.22
H3F3A-202ENST00000366814 SMC5Q8IY18 1101 aa13.66□□□□□ -0.22
H3F3A-202ENST00000366814 MIS18AQ9NYP9 233 aa13.66□□□□□ -0.22
H3F3A-202ENST00000366814 KRT24Q2M2I5 525 aa13.65□□□□□ -0.22
H3F3A-202ENST00000366814 CCDC30Q5VVM6 783 aa13.65□□□□□ -0.22
H3F3A-202ENST00000366814 INTS3Q68E01 1043 aaKnown RBP13.65□□□□□ -0.22
H3F3A-202ENST00000366814 ANP32EQ9BTT0 268 aa13.65□□□□□ -0.22
H3F3A-202ENST00000366814 STK32BQ9NY57 414 aa13.65□□□□□ -0.22
H3F3A-202ENST00000366814 NCAPD2Q15021 1401 aa13.65□□□□□ -0.22
H3F3A-202ENST00000366814 AKAP4Q5JQC9 854 aa13.65□□□□□ -0.22
H3F3A-202ENST00000366814 C1orf141Q5JVX7 400 aa13.65□□□□□ -0.22
H3F3A-202ENST00000366814 GCC1Q96CN9 775 aa13.65□□□□□ -0.22
H3F3A-202ENST00000366814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.65□□□□□ -0.22
H3F3A-202ENST00000366814 CACNA1FO60840 1977 aa13.64□□□□□ -0.23
H3F3A-202ENST00000366814 SPDYE2BA6NHP3 402 aa13.64□□□□□ -0.23
H3F3A-202ENST00000366814 SPDYE6P0CI01 402 aa13.64□□□□□ -0.23
H3F3A-202ENST00000366814 SPDYE2Q495Y8 402 aa13.64□□□□□ -0.23
H3F3A-202ENST00000366814 IL17REQ8NFR9 667 aa13.64□□□□□ -0.23
H3F3A-202ENST00000366814 ANO8Q9HCE9 1232 aaPredicted RBP13.64□□□□□ -0.23
H3F3A-202ENST00000366814 PKD1L3Q7Z443 1732 aa13.64□□□□□ -0.23
H3F3A-202ENST00000366814 ZNF530Q6P9A1 599 aaPredicted RBP13.63□□□□□ -0.23
H3F3A-202ENST00000366814 MPRIPQ6WCQ1 1025 aa13.63□□□□□ -0.23
H3F3A-202ENST00000366814 IFNL2Q8IZJ0 200 aa13.63□□□□□ -0.23
H3F3A-202ENST00000366814 CEMIPQ8WUJ3 1361 aa13.63□□□□□ -0.23
H3F3A-202ENST00000366814 TEFQ10587 303 aa13.63□□□□□ -0.23
H3F3A-202ENST00000366814 SLC15A2Q16348 729 aa13.62□□□□□ -0.23
H3F3A-202ENST00000366814 SLC27A3Q5K4L6 730 aa13.62□□□□□ -0.23
H3F3A-202ENST00000366814 UPF2Q9HAU5 1272 aaKnown RBP13.62□□□□□ -0.23
H3F3A-202ENST00000366814 CCT4P50991 539 aaKnown RBP13.61□□□□□ -0.23
H3F3A-202ENST00000366814 NKX1-1Q15270 411 aaPredicted RBP13.61□□□□□ -0.23
H3F3A-202ENST00000366814 LRRC4BQ9NT99 713 aa13.61□□□□□ -0.23
H3F3A-202ENST00000366814 ITGB4P16144 1822 aa13.61□□□□□ -0.23
H3F3A-202ENST00000366814 PHKG2P15735 406 aa13.61□□□□□ -0.23
H3F3A-202ENST00000366814 KCNQ4P56696 695 aa13.61□□□□□ -0.23
H3F3A-202ENST00000366814 NUCB1Q02818 461 aa13.61□□□□□ -0.23
H3F3A-202ENST00000366814 HOXB7P09629 217 aa13.6□□□□□ -0.23
H3F3A-202ENST00000366814 DAXXQ9UER7 740 aaPredicted RBP13.6□□□□□ -0.23
H3F3A-202ENST00000366814 LRP5O75197 1615 aa13.6□□□□□ -0.23
H3F3A-202ENST00000366814 PLEKHG2Q9H7P9 1386 aa13.59□□□□□ -0.23
H3F3A-202ENST00000366814 KDM3BQ7LBC6 1761 aa13.59□□□□□ -0.23
H3F3A-202ENST00000366814 CHD1LQ86WJ1 897 aa13.59□□□□□ -0.23
H3F3A-202ENST00000366814 C1orf115Q9H7X2 142 aa13.59□□□□□ -0.23
H3F3A-202ENST00000366814 SPON1Q9HCB6 807 aa13.59□□□□□ -0.23
H3F3A-202ENST00000366814 CCNL1Q9UK58 526 aaPredicted RBP13.59□□□□□ -0.23
H3F3A-202ENST00000366814 RPAP2Q8IXW5 612 aaPredicted RBP13.59□□□□□ -0.23
H3F3A-202ENST00000366814 TMOD3Q9NYL9 352 aa13.59□□□□□ -0.23
H3F3A-202ENST00000366814 HSP90AB1P08238 724 aaKnown RBP13.58□□□□□ -0.24
H3F3A-202ENST00000366814 PIGBQ92521 554 aa13.58□□□□□ -0.24
H3F3A-202ENST00000366814 SMARCC1Q92922 1105 aaPredicted RBP13.58□□□□□ -0.24
H3F3A-202ENST00000366814 PDGFDQ9GZP0 370 aaPredicted RBP13.58□□□□□ -0.24
H3F3A-202ENST00000366814 SRCAPQ6ZRS2 3230 aa13.58□□□□□ -0.24
H3F3A-202ENST00000366814 LY75O60449 1722 aa13.58□□□□□ -0.24
H3F3A-202ENST00000366814 BTBD11A6QL63 1104 aa13.57□□□□□ -0.24
H3F3A-202ENST00000366814 FLIIQ13045 1269 aa13.57□□□□□ -0.24
H3F3A-202ENST00000366814 FKBP5Q13451 457 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms