RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 ZNF831Q5JPB2 1677 aa16.01■□□□□ 0.15
NIF3L1-201ENST00000359683 PROM2Q8N271 834 aa16.01■□□□□ 0.15
NIF3L1-201ENST00000359683 SLC27A3Q5K4L6 730 aa16■□□□□ 0.15
NIF3L1-201ENST00000359683 DNAJC10Q8IXB1 793 aa16■□□□□ 0.15
NIF3L1-201ENST00000359683 ITPK1Q13572 414 aa15.99■□□□□ 0.15
NIF3L1-201ENST00000359683 TXNRD1Q16881 649 aa15.99■□□□□ 0.15
NIF3L1-201ENST00000359683 ZNF428Q96B54 188 aa15.99■□□□□ 0.15
NIF3L1-201ENST00000359683 ANO8Q9HCE9 1232 aaPredicted RBP15.99■□□□□ 0.15
NIF3L1-201ENST00000359683 CCNL1Q9UK58 526 aaPredicted RBP15.99■□□□□ 0.15
NIF3L1-201ENST00000359683 CHMP4AQ9BY43 222 aa15.98■□□□□ 0.15
NIF3L1-201ENST00000359683 LRRC4BQ9NT99 713 aa15.98■□□□□ 0.15
NIF3L1-201ENST00000359683 CICQ96RK0 1608 aaPredicted RBP15.98■□□□□ 0.15
NIF3L1-201ENST00000359683 STARD3NLO95772 234 aa15.97■□□□□ 0.15
NIF3L1-201ENST00000359683 CYP19A1P11511 503 aaPredicted RBP15.97■□□□□ 0.15
NIF3L1-201ENST00000359683 KCNQ4P56696 695 aa15.97■□□□□ 0.15
NIF3L1-201ENST00000359683 C5P01031 1676 aa15.97■□□□□ 0.15
NIF3L1-201ENST00000359683 EIF2S2P20042 333 aaKnown RBP15.97■□□□□ 0.15
NIF3L1-201ENST00000359683 HDGFL1Q5TGJ6 251 aa15.97■□□□□ 0.15
NIF3L1-201ENST00000359683 TJP1Q07157 1748 aa15.97■□□□□ 0.15
NIF3L1-201ENST00000359683 HMGB2P26583 209 aaKnown RBP15.96■□□□□ 0.15
NIF3L1-201ENST00000359683 CCDC30Q5VVM6 783 aa15.96■□□□□ 0.15
NIF3L1-201ENST00000359683 LINC00116Q8NCU8 138 aa15.96■□□□□ 0.15
NIF3L1-201ENST00000359683 RARSP54136 660 aaKnown RBP15.95■□□□□ 0.14
NIF3L1-201ENST00000359683 ALDH1L2Q3SY69 923 aa15.95■□□□□ 0.14
NIF3L1-201ENST00000359683 SPON1Q9HCB6 807 aa15.95■□□□□ 0.14
NIF3L1-201ENST00000359683 ERBB4Q15303 1308 aa15.95■□□□□ 0.14
NIF3L1-201ENST00000359683 A1BGP04217 495 aa15.94■□□□□ 0.14
NIF3L1-201ENST00000359683 PDIA6Q15084 440 aa15.94■□□□□ 0.14
NIF3L1-201ENST00000359683 RC3H1Q5TC82 1133 aaKnown RBP15.94■□□□□ 0.14
NIF3L1-201ENST00000359683 NECTIN2Q92692 538 aa15.94■□□□□ 0.14
NIF3L1-201ENST00000359683 LAMB4A4D0S4 1761 aa15.94■□□□□ 0.14
NIF3L1-201ENST00000359683 INTS5Q6P9B9 1019 aaKnown RBP15.94■□□□□ 0.14
NIF3L1-201ENST00000359683 SSH1Q8WYL5 1049 aa15.94■□□□□ 0.14
NIF3L1-201ENST00000359683 PPP1R1BQ9UD71 204 aaPredicted RBP15.94■□□□□ 0.14
NIF3L1-201ENST00000359683 TAF1LQ8IZX4 1826 aa15.93■□□□□ 0.14
NIF3L1-201ENST00000359683 NBPF26B4DH59 902 aa15.93■□□□□ 0.14
NIF3L1-201ENST00000359683 CRKLP46109 303 aaKnown RBP15.93■□□□□ 0.14
NIF3L1-201ENST00000359683 NBPF10Q6P3W6 841 aaKnown RBP15.93■□□□□ 0.14
NIF3L1-201ENST00000359683 NBPF15Q8N660 670 aa15.93■□□□□ 0.14
NIF3L1-201ENST00000359683 DDX21Q9NR30 783 aaKnown RBP eCLIP15.93■□□□□ 0.14
NIF3L1-201ENST00000359683 DBF4Q9UBU7 674 aaPredicted RBP15.93■□□□□ 0.14
NIF3L1-201ENST00000359683 RCAN3Q9UKA8 241 aa15.93■□□□□ 0.14
NIF3L1-201ENST00000359683 COL5A3P25940 1745 aaPredicted RBP15.93■□□□□ 0.14
NIF3L1-201ENST00000359683 CNTNAP4Q9C0A0 1308 aa15.92■□□□□ 0.14
NIF3L1-201ENST00000359683 TCERG1O14776 1098 aaKnown RBP15.92■□□□□ 0.14
NIF3L1-201ENST00000359683 BRPF1P55201 1214 aaPredicted RBP15.92■□□□□ 0.14
NIF3L1-201ENST00000359683 STK31Q9BXU1 1019 aa15.92■□□□□ 0.14
NIF3L1-201ENST00000359683 CCDC87Q9NVE4 849 aa15.92■□□□□ 0.14
NIF3L1-201ENST00000359683 CHPF2Q9P2E5 772 aa15.92■□□□□ 0.14
NIF3L1-201ENST00000359683 SLC4A2P04920 1241 aa15.91■□□□□ 0.14
NIF3L1-201ENST00000359683 LRP10Q7Z4F1 713 aa15.91■□□□□ 0.14
NIF3L1-201ENST00000359683 MRPL50Q8N5N7 158 aaKnown RBP15.91■□□□□ 0.14
NIF3L1-201ENST00000359683 MYH14Q7Z406 1995 aaKnown RBP15.91■□□□□ 0.14
NIF3L1-201ENST00000359683 PROSER3Q2NL68 480 aa15.9■□□□□ 0.14
NIF3L1-201ENST00000359683 POTEHQ6S545 545 aa15.9■□□□□ 0.14
NIF3L1-201ENST00000359683 ZBTB1Q9Y2K1 713 aa15.9■□□□□ 0.14
NIF3L1-201ENST00000359683 CACNA1FO60840 1977 aa15.9■□□□□ 0.14
NIF3L1-201ENST00000359683 BCAR3O75815 825 aa15.9■□□□□ 0.14
NIF3L1-201ENST00000359683 ANXA1P04083 346 aa15.9■□□□□ 0.14
NIF3L1-201ENST00000359683 CENPBP07199 599 aaPredicted RBP15.9■□□□□ 0.14
NIF3L1-201ENST00000359683 PDGFDQ9GZP0 370 aaPredicted RBP15.9■□□□□ 0.14
NIF3L1-201ENST00000359683 SMC4Q9NTJ3 1288 aa15.9■□□□□ 0.14
NIF3L1-201ENST00000359683 HYPKQ9NX55 129 aa15.9■□□□□ 0.14
NIF3L1-201ENST00000359683 STK32BQ9NY57 414 aa15.9■□□□□ 0.14
NIF3L1-201ENST00000359683 C4BP0C0L5 1744 aa15.89■□□□□ 0.13
NIF3L1-201ENST00000359683 RPS6KA4O75676 772 aa15.89■□□□□ 0.13
NIF3L1-201ENST00000359683 CANXP27824 592 aaKnown RBP15.89■□□□□ 0.13
NIF3L1-201ENST00000359683 IL6STP40189 918 aaPredicted RBP15.89■□□□□ 0.13
NIF3L1-201ENST00000359683 PIP4K2AP48426 406 aaPredicted RBP15.89■□□□□ 0.13
NIF3L1-201ENST00000359683 EIF5P55010 431 aaKnown RBP15.89■□□□□ 0.13
NIF3L1-201ENST00000359683 BCL2L13Q9BXK5 485 aa15.89■□□□□ 0.13
NIF3L1-201ENST00000359683 MYL6BP14649 208 aa15.88■□□□□ 0.13
NIF3L1-201ENST00000359683 AKT1S1Q96B36 256 aa15.88■□□□□ 0.13
NIF3L1-201ENST00000359683 ZBTB7AO95365 584 aa15.87■□□□□ 0.13
NIF3L1-201ENST00000359683 G2E3Q7L622 706 aa15.87■□□□□ 0.13
NIF3L1-201ENST00000359683 PHAXQ9H814 394 aaKnown RBP15.87■□□□□ 0.13
NIF3L1-201ENST00000359683 SLC15A2Q16348 729 aa15.86■□□□□ 0.13
NIF3L1-201ENST00000359683 AK7Q96M32 723 aa15.86■□□□□ 0.13
NIF3L1-201ENST00000359683 QSER1Q2KHR3 1735 aa15.86■□□□□ 0.13
NIF3L1-201ENST00000359683 TUBGCP6Q96RT7 1819 aa15.86■□□□□ 0.13
NIF3L1-201ENST00000359683 GNPATO15228 680 aa15.86■□□□□ 0.13
NIF3L1-201ENST00000359683 ZNF827Q17R98 1081 aa15.86■□□□□ 0.13
NIF3L1-201ENST00000359683 COPS6Q7L5N1 327 aa15.86■□□□□ 0.13
NIF3L1-201ENST00000359683 RTCBQ9Y3I0 505 aaKnown RBP15.86■□□□□ 0.13
NIF3L1-201ENST00000359683 FLIIQ13045 1269 aa15.85■□□□□ 0.13
NIF3L1-201ENST00000359683 AMIGO3Q86WK7 504 aa15.85■□□□□ 0.13
NIF3L1-201ENST00000359683 XAGE3Q8WTP9 111 aa15.85■□□□□ 0.13
NIF3L1-201ENST00000359683 NOB1Q9ULX3 412 aaKnown RBP15.85■□□□□ 0.13
NIF3L1-201ENST00000359683 ARHGAP45Q92619 1136 aa15.84■□□□□ 0.13
NIF3L1-201ENST00000359683 RNF39Q9H2S5 420 aa15.84■□□□□ 0.13
NIF3L1-201ENST00000359683 KIF16BQ96L93 1317 aa15.84■□□□□ 0.13
NIF3L1-201ENST00000359683 TTLL7Q6ZT98 887 aa15.83■□□□□ 0.13
NIF3L1-201ENST00000359683 ATF5Q9Y2D1 282 aaPredicted RBP15.83■□□□□ 0.13
NIF3L1-201ENST00000359683 PTPRCP08575 1304 aa15.83■□□□□ 0.13
NIF3L1-201ENST00000359683 A0A087WZG4 1122 aa15.83■□□□□ 0.12
NIF3L1-201ENST00000359683 SSFA2P28290 1259 aa15.83■□□□□ 0.12
NIF3L1-201ENST00000359683 PTGER2P43116 358 aa15.83■□□□□ 0.12
NIF3L1-201ENST00000359683 AIMP1Q12904 312 aaKnown RBP15.83■□□□□ 0.12
NIF3L1-201ENST00000359683 TRAPPC3LQ5T215 181 aa15.83■□□□□ 0.12
NIF3L1-201ENST00000359683 SMIM5Q71RC9 77 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms