RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 DDX21Q9NR30 783 aaKnown RBP eCLIP16.66■□□□□ 0.26
NFIX-201ENST00000358552 EXOC5O00471 708 aa16.65■□□□□ 0.26
NFIX-201ENST00000358552 AFF2P51816 1311 aa16.65■□□□□ 0.26
NFIX-201ENST00000358552 KAT6BQ8WYB5 2073 aa16.65■□□□□ 0.26
NFIX-201ENST00000358552 BARGINQ6ZT62 677 aa16.65■□□□□ 0.26
NFIX-201ENST00000358552 CCDC9Q9Y3X0 531 aaKnown RBP16.65■□□□□ 0.26
NFIX-201ENST00000358552 KCNQ3O43525 872 aa16.64■□□□□ 0.25
NFIX-201ENST00000358552 G2E3Q7L622 706 aa16.64■□□□□ 0.25
NFIX-201ENST00000358552 TEX13AQ9BXU3 409 aaPredicted RBP16.64■□□□□ 0.25
NFIX-201ENST00000358552 SLC4A10Q6U841 1118 aa16.63■□□□□ 0.25
NFIX-201ENST00000358552 CHPF2Q9P2E5 772 aa16.63■□□□□ 0.25
NFIX-201ENST00000358552 GNAI2P04899 355 aa16.62■□□□□ 0.25
NFIX-201ENST00000358552 ANKRD44Q8N8A2 993 aa16.62■□□□□ 0.25
NFIX-201ENST00000358552 DDX54Q8TDD1 881 aaKnown RBP16.62■□□□□ 0.25
NFIX-201ENST00000358552 SRCIN1Q9C0H9 1055 aa16.62■□□□□ 0.25
NFIX-201ENST00000358552 ATP10DQ9P241 1426 aa16.62■□□□□ 0.25
NFIX-201ENST00000358552 KSR2Q6VAB6 950 aa16.62■□□□□ 0.25
NFIX-201ENST00000358552 DNAAF4Q8WXU2 420 aa16.62■□□□□ 0.25
NFIX-201ENST00000358552 ALDH1L1O75891 902 aa16.61■□□□□ 0.25
NFIX-201ENST00000358552 DDRGK1Q96HY6 314 aa16.61■□□□□ 0.25
NFIX-201ENST00000358552 ZNF496Q96IT1 587 aaPredicted RBP16.61■□□□□ 0.25
NFIX-201ENST00000358552 TRPC5Q9UL62 973 aaPredicted RBP16.61■□□□□ 0.25
NFIX-201ENST00000358552 PDZRN3Q9UPQ7 1066 aa16.61■□□□□ 0.25
NFIX-201ENST00000358552 PDE4AP27815 886 aa16.6■□□□□ 0.25
NFIX-201ENST00000358552 FAM161AQ3B820 660 aa16.6■□□□□ 0.25
NFIX-201ENST00000358552 VSIG10Q8N0Z9 540 aa16.6■□□□□ 0.25
NFIX-201ENST00000358552 NECTIN2Q92692 538 aa16.6■□□□□ 0.25
NFIX-201ENST00000358552 BACH2Q9BYV9 841 aa16.6■□□□□ 0.25
NFIX-201ENST00000358552 TMOD3Q9NYL9 352 aa16.6■□□□□ 0.25
NFIX-201ENST00000358552 ATRNO75882 1429 aa16.6■□□□□ 0.25
NFIX-201ENST00000358552 NUCB1Q02818 461 aa16.59■□□□□ 0.25
NFIX-201ENST00000358552 GJD4Q96KN9 370 aaPredicted RBP16.59■□□□□ 0.25
NFIX-201ENST00000358552 DCTPP1Q9H773 170 aa16.59■□□□□ 0.25
NFIX-201ENST00000358552 F6X3S4 739 aa16.59■□□□□ 0.25
NFIX-201ENST00000358552 EIF5BO60841 1220 aaKnown RBP16.59■□□□□ 0.25
NFIX-201ENST00000358552 SLC39A6Q13433 755 aa16.59■□□□□ 0.25
NFIX-201ENST00000358552 PHAXQ9H814 394 aaKnown RBP16.59■□□□□ 0.25
NFIX-201ENST00000358552 GLI3P10071 1580 aa16.58■□□□□ 0.24
NFIX-201ENST00000358552 TNS2Q63HR2 1409 aa16.58■□□□□ 0.24
NFIX-201ENST00000358552 PI4KAP2A4QPH2 592 aa16.58■□□□□ 0.24
NFIX-201ENST00000358552 RGS3P49796 1198 aa16.58■□□□□ 0.24
NFIX-201ENST00000358552 PI4KAP1Q8N8J0 262 aa16.58■□□□□ 0.24
NFIX-201ENST00000358552 N4BP2Q86UW6 1770 aaPredicted RBP16.58■□□□□ 0.24
NFIX-201ENST00000358552 NEXNQ0ZGT2 675 aa16.57■□□□□ 0.24
NFIX-201ENST00000358552 DDB1Q16531 1140 aa16.57■□□□□ 0.24
NFIX-201ENST00000358552 FAM98CQ17RN3 349 aaKnown RBP16.57■□□□□ 0.24
NFIX-201ENST00000358552 CEP85Q6P2H3 762 aa16.57■□□□□ 0.24
NFIX-201ENST00000358552 QTRT2Q9H974 415 aaKnown RBP16.57■□□□□ 0.24
NFIX-201ENST00000358552 UBTFL1P0CB47 393 aaPredicted RBP16.56■□□□□ 0.24
NFIX-201ENST00000358552 BEND3Q5T5X7 828 aa16.56■□□□□ 0.24
NFIX-201ENST00000358552 CHD1LQ86WJ1 897 aa16.56■□□□□ 0.24
NFIX-201ENST00000358552 MEIS3Q99687 375 aa16.56■□□□□ 0.24
NFIX-201ENST00000358552 THSD7AQ9UPZ6 1657 aa16.56■□□□□ 0.24
NFIX-201ENST00000358552 ITGB4P16144 1822 aa16.56■□□□□ 0.24
NFIX-201ENST00000358552 ZNF772Q68DY9 489 aaPredicted RBP16.56■□□□□ 0.24
NFIX-201ENST00000358552 LINS1Q8NG48 757 aa16.56■□□□□ 0.24
NFIX-201ENST00000358552 ONECUT3O60422 494 aaPredicted RBP16.55■□□□□ 0.24
NFIX-201ENST00000358552 PDIA6Q15084 440 aa16.55■□□□□ 0.24
NFIX-201ENST00000358552 RTL5Q5HYW3 569 aaPredicted RBP16.55■□□□□ 0.24
NFIX-201ENST00000358552 ATP8B2P98198 1209 aa16.54■□□□□ 0.24
NFIX-201ENST00000358552 SIRT2Q8IXJ6 389 aa16.54■□□□□ 0.24
NFIX-201ENST00000358552 USP44Q9H0E7 712 aa16.54■□□□□ 0.24
NFIX-201ENST00000358552 C1orf115Q9H7X2 142 aa16.53■□□□□ 0.24
NFIX-201ENST00000358552 TOGARAM1Q9Y4F4 1720 aa16.53■□□□□ 0.24
NFIX-201ENST00000358552 STARD3NLO95772 234 aa16.53■□□□□ 0.24
NFIX-201ENST00000358552 ANKRD45Q5TZF3 282 aa16.53■□□□□ 0.24
NFIX-201ENST00000358552 ANKRD13DQ6ZTN6 518 aa16.53■□□□□ 0.24
NFIX-201ENST00000358552 RIC3Q7Z5B4 369 aa16.53■□□□□ 0.24
NFIX-201ENST00000358552 MAP3K2Q9Y2U5 619 aa16.53■□□□□ 0.24
NFIX-201ENST00000358552 ADCY9O60503 1353 aa16.52■□□□□ 0.24
NFIX-201ENST00000358552 USP16Q9Y5T5 823 aa16.52■□□□□ 0.24
NFIX-201ENST00000358552 HSP90AB4PQ58FF6 505 aa16.51■□□□□ 0.23
NFIX-201ENST00000358552 C9orf78Q9NZ63 289 aaPredicted RBP16.51■□□□□ 0.23
NFIX-201ENST00000358552 UBR2Q8IWV8 1755 aa16.51■□□□□ 0.23
NFIX-201ENST00000358552 PAPPAQ13219 1627 aa16.51■□□□□ 0.23
NFIX-201ENST00000358552 LAMB4A4D0S4 1761 aa16.51■□□□□ 0.23
NFIX-201ENST00000358552 METTL22Q9BUU2 404 aaPredicted RBP16.5■□□□□ 0.23
NFIX-201ENST00000358552 UTYO14607 1347 aa16.5■□□□□ 0.23
NFIX-201ENST00000358552 BCL9O00512 1426 aa16.5■□□□□ 0.23
NFIX-201ENST00000358552 PRAMEF22A3QJZ6 481 aa16.5■□□□□ 0.23
NFIX-201ENST00000358552 RAB11FIP3O75154 756 aa16.5■□□□□ 0.23
NFIX-201ENST00000358552 COPS6Q7L5N1 327 aa16.5■□□□□ 0.23
NFIX-201ENST00000358552 MARCH10Q8NA82 808 aaPredicted RBP16.5■□□□□ 0.23
NFIX-201ENST00000358552 PLBD2Q8NHP8 589 aa16.5■□□□□ 0.23
NFIX-201ENST00000358552 PIGBQ92521 554 aa16.5■□□□□ 0.23
NFIX-201ENST00000358552 BRWD3Q6RI45 1802 aa16.49■□□□□ 0.23
NFIX-201ENST00000358552 PROSER3Q2NL68 480 aa16.49■□□□□ 0.23
NFIX-201ENST00000358552 XAGE3Q8WTP9 111 aa16.49■□□□□ 0.23
NFIX-201ENST00000358552 DOT1LQ8TEK3 1739 aa16.49■□□□□ 0.23
NFIX-201ENST00000358552 KCPQ6ZWJ8 1503 aa16.49■□□□□ 0.23
NFIX-201ENST00000358552 A0A0G2JS52 829 aa16.48■□□□□ 0.23
NFIX-201ENST00000358552 RBM6P78332 1123 aaKnown RBP16.48■□□□□ 0.23
NFIX-201ENST00000358552 MTX1Q13505 466 aa16.48■□□□□ 0.23
NFIX-201ENST00000358552 LRP10Q7Z4F1 713 aa16.48■□□□□ 0.23
NFIX-201ENST00000358552 MYL6BP14649 208 aa16.48■□□□□ 0.23
NFIX-201ENST00000358552 C8orf34Q49A92 452 aa16.48■□□□□ 0.23
NFIX-201ENST00000358552 SSH3Q8TE77 659 aa16.48■□□□□ 0.23
NFIX-201ENST00000358552 UPF2Q9HAU5 1272 aaKnown RBP16.48■□□□□ 0.23
NFIX-201ENST00000358552 ATG3Q9NT62 314 aa16.48■□□□□ 0.23
NFIX-201ENST00000358552 GRM8O00222 908 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms