RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 LRRFIP2Q9Y608 721 aaKnown RBP21.41■■□□□ 1.02
RTN4-204ENST00000357732 USP44Q9H0E7 712 aa21.41■■□□□ 1.02
RTN4-204ENST00000357732 NSFL1CQ9UNZ2 370 aaKnown RBP21.41■■□□□ 1.02
RTN4-204ENST00000357732 LETM1O95202 739 aaPredicted RBP21.4■■□□□ 1.02
RTN4-204ENST00000357732 POLA2Q14181 598 aa21.4■■□□□ 1.02
RTN4-204ENST00000357732 TAF7Q15545 349 aaPredicted RBP21.4■■□□□ 1.02
RTN4-204ENST00000357732 DIP2AQ14689 1571 aa21.4■■□□□ 1.02
RTN4-204ENST00000357732 NWD1Q149M9 1564 aa21.4■■□□□ 1.02
RTN4-204ENST00000357732 RAD50Q92878 1312 aa21.4■■□□□ 1.02
RTN4-204ENST00000357732 CRYBG1Q9Y4K1 1723 aa21.4■■□□□ 1.02
RTN4-204ENST00000357732 ANKARQ7Z5J8 1434 aa21.4■■□□□ 1.02
RTN4-204ENST00000357732 TBX22Q9Y458 520 aa21.4■■□□□ 1.02
RTN4-204ENST00000357732 TSHZ3Q63HK5 1081 aa21.39■■□□□ 1.02
RTN4-204ENST00000357732 NLRP6P59044 892 aa21.39■■□□□ 1.01
RTN4-204ENST00000357732 NUTM2GQ5VZR2 741 aa21.39■■□□□ 1.01
RTN4-204ENST00000357732 NECTIN2Q92692 538 aa21.39■■□□□ 1.01
RTN4-204ENST00000357732 HOXB7P09629 217 aa21.38■■□□□ 1.01
RTN4-204ENST00000357732 HSP90AB4PQ58FF6 505 aa21.38■■□□□ 1.01
RTN4-204ENST00000357732 RGPD8O14715 1765 aaPredicted RBP21.38■■□□□ 1.01
RTN4-204ENST00000357732 KIF1BPQ96EK5 621 aa21.38■■□□□ 1.01
RTN4-204ENST00000357732 SLIT1O75093 1534 aa21.37■■□□□ 1.01
RTN4-204ENST00000357732 SGSM2O43147 1006 aa21.37■■□□□ 1.01
RTN4-204ENST00000357732 ATP6V1DQ9Y5K8 247 aa21.37■■□□□ 1.01
RTN4-204ENST00000357732 USP42Q9H9J4 1324 aaKnown RBP21.37■■□□□ 1.01
RTN4-204ENST00000357732 CNTROBQ8N137 903 aa21.36■■□□□ 1.01
RTN4-204ENST00000357732 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.36■■□□□ 1.01
RTN4-204ENST00000357732 ARHGAP23Q9P227 1491 aa21.36■■□□□ 1.01
RTN4-204ENST00000357732 HOXC9P31274 260 aa21.36■■□□□ 1.01
RTN4-204ENST00000357732 MTERF4Q7Z6M4 381 aaKnown RBP21.36■■□□□ 1.01
RTN4-204ENST00000357732 UNC5CLQ8IV45 518 aa21.36■■□□□ 1.01
RTN4-204ENST00000357732 PI4K2BQ8TCG2 481 aa21.36■■□□□ 1.01
RTN4-204ENST00000357732 RPAP1Q9BWH6 1393 aaPredicted RBP21.36■■□□□ 1.01
RTN4-204ENST00000357732 MED1Q15648 1581 aaPredicted RBP21.35■■□□□ 1.01
RTN4-204ENST00000357732 FOXD4L5Q5VV16 416 aaPredicted RBP21.34■■□□□ 1.01
RTN4-204ENST00000357732 RHPN1Q8TCX5 695 aa21.34■■□□□ 1.01
RTN4-204ENST00000357732 FOXD4L4Q8WXT5 416 aaPredicted RBP21.34■■□□□ 1.01
RTN4-204ENST00000357732 TTC14Q96N46 770 aa21.34■■□□□ 1.01
RTN4-204ENST00000357732 UPF3BQ9BZI7 483 aaKnown RBP21.34■■□□□ 1.01
RTN4-204ENST00000357732 MARF1Q9Y4F3 1742 aaKnown RBP21.34■■□□□ 1.01
RTN4-204ENST00000357732 TTC41PQ6P2S7 1318 aa21.34■■□□□ 1.01
RTN4-204ENST00000357732 CCDC183Q5T5S1 534 aa21.34■■□□□ 1.01
RTN4-204ENST00000357732 IL17REQ8NFR9 667 aa21.34■■□□□ 1.01
RTN4-204ENST00000357732 PDIA4P13667 645 aaKnown RBP21.33■■□□□ 1.01
RTN4-204ENST00000357732 HDGFL1Q5TGJ6 251 aa21.33■■□□□ 1.01
RTN4-204ENST00000357732 USP48Q86UV5 1035 aa21.33■■□□□ 1.01
RTN4-204ENST00000357732 R3HCC1Q9Y3T6 440 aaKnown RBP21.33■■□□□ 1.01
RTN4-204ENST00000357732 CEMIPQ8WUJ3 1361 aa21.33■■□□□ 1.01
RTN4-204ENST00000357732 LTV1Q96GA3 475 aaPredicted RBP21.33■■□□□ 1
RTN4-204ENST00000357732 CHAMP1Q96JM3 812 aa21.33■■□□□ 1
RTN4-204ENST00000357732 DYNC1I1O14576 645 aa21.32■■□□□ 1
RTN4-204ENST00000357732 PPP1R42Q7Z4L9 355 aa21.32■■□□□ 1
RTN4-204ENST00000357732 LIMCH1Q9UPQ0 1083 aa21.32■■□□□ 1
RTN4-204ENST00000357732 SURF6O75683 361 aaKnown RBP21.32■■□□□ 1
RTN4-204ENST00000357732 ZSCAN22P10073 491 aaPredicted RBP21.32■■□□□ 1
RTN4-204ENST00000357732 XPCQ01831 940 aaPredicted RBP21.32■■□□□ 1
RTN4-204ENST00000357732 SNX14Q9Y5W7 946 aa21.32■■□□□ 1
RTN4-204ENST00000357732 UBE2HP62256 183 aa21.31■■□□□ 1
RTN4-204ENST00000357732 KIAA2012Q0VF49 1180 aa21.31■■□□□ 1
RTN4-204ENST00000357732 SASS6Q6UVJ0 657 aa21.31■■□□□ 1
RTN4-204ENST00000357732 LSG1Q9H089 658 aaKnown RBP21.31■■□□□ 1
RTN4-204ENST00000357732 RUFY2Q8WXA3 655 aa21.31■■□□□ 1
RTN4-204ENST00000357732 IL1RAPL2Q9NP60 686 aa21.3■■□□□ 1
RTN4-204ENST00000357732 KDM3BQ7LBC6 1761 aa21.3■■□□□ 1
RTN4-204ENST00000357732 RNF214Q8ND24 703 aa21.3■■□□□ 1
RTN4-204ENST00000357732 GLRX3O76003 335 aaKnown RBP21.29■■□□□ 1
RTN4-204ENST00000357732 PTMAP06454 111 aaKnown RBP21.29■■□□□ 1
RTN4-204ENST00000357732 KCNA6P17658 529 aa21.29■■□□□ 1
RTN4-204ENST00000357732 NOL8Q76FK4 1167 aaKnown RBP21.29■■□□□ 1
RTN4-204ENST00000357732 USHBP1Q8N6Y0 703 aa21.29■■□□□ 1
RTN4-204ENST00000357732 HDAC5Q9UQL6 1122 aa21.29■■□□□ 1
RTN4-204ENST00000357732 MTX1Q13505 466 aa21.29■■□□□ 1
RTN4-204ENST00000357732 NUTM1Q86Y26 1132 aa21.29■■□□□ 1
RTN4-204ENST00000357732 ABTB2Q8N961 1025 aa21.29■■□□□ 1
RTN4-204ENST00000357732 TM6SF1Q9BZW5 370 aa21.29■■□□□ 1
RTN4-204ENST00000357732 IL25Q9H293 177 aa21.29■■□□□ 1
RTN4-204ENST00000357732 SRGAP3O43295 1099 aa21.28■■□□□ 1
RTN4-204ENST00000357732 STX6O43752 255 aa21.28■■□□□ 1
RTN4-204ENST00000357732 ZSCAN31Q96LW9 406 aaPredicted RBP21.28■■□□□ 1
RTN4-204ENST00000357732 UQCRHLA0A096LP55 91 aa21.28■■□□□ 1
RTN4-204ENST00000357732 GADD45BO75293 160 aaPredicted RBP21.28■■□□□ 1
RTN4-204ENST00000357732 UQCRHP07919 91 aa21.28■■□□□ 1
RTN4-204ENST00000357732 THEMISQ8N1K5 641 aaPredicted RBP21.28■■□□□ 1
RTN4-204ENST00000357732 SH2B1Q9NRF2 756 aaPredicted RBP21.28■■□□□ 1
RTN4-204ENST00000357732 AK2P54819 239 aa21.26■□□□□ 0.99
RTN4-204ENST00000357732 KCNB2Q92953 911 aa21.26■□□□□ 0.99
RTN4-204ENST00000357732 ADGRL3Q9HAR2 1447 aa21.26■□□□□ 0.99
RTN4-204ENST00000357732 SMC3Q9UQE7 1217 aa21.26■□□□□ 0.99
RTN4-204ENST00000357732 F13A1P00488 732 aa21.26■□□□□ 0.99
RTN4-204ENST00000357732 BEND3Q5T5X7 828 aa21.26■□□□□ 0.99
RTN4-204ENST00000357732 VPS53Q5VIR6 699 aa21.26■□□□□ 0.99
RTN4-204ENST00000357732 DNAAF4Q8WXU2 420 aa21.26■□□□□ 0.99
RTN4-204ENST00000357732 PHAXQ9H814 394 aaKnown RBP21.25■□□□□ 0.99
RTN4-204ENST00000357732 CHD2O14647 1828 aaKnown RBP21.25■□□□□ 0.99
RTN4-204ENST00000357732 SYT1P21579 422 aa21.25■□□□□ 0.99
RTN4-204ENST00000357732 C14orf37Q86TY3 774 aa21.25■□□□□ 0.99
RTN4-204ENST00000357732 ERC1Q8IUD2 1116 aa21.25■□□□□ 0.99
RTN4-204ENST00000357732 GPATCH3Q96I76 525 aa21.25■□□□□ 0.99
RTN4-204ENST00000357732 EIF4A1P60842 406 aaKnown RBP21.24■□□□□ 0.99
RTN4-204ENST00000357732 RUFY3Q7L099 469 aa21.24■□□□□ 0.99
RTN4-204ENST00000357732 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.24■□□□□ 0.995e-9■■■□□ 14.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms