RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 GJD4Q96KN9 370 aaPredicted RBP15.79■□□□□ 0.12
RTFDC1-202ENST00000357348 QTRT2Q9H974 415 aaKnown RBP15.79■□□□□ 0.12
RTFDC1-202ENST00000357348 PLEKHG2Q9H7P9 1386 aa15.79■□□□□ 0.12
RTFDC1-202ENST00000357348 TNS2Q63HR2 1409 aa15.79■□□□□ 0.12
RTFDC1-202ENST00000357348 MARCH10Q8NA82 808 aaPredicted RBP15.78■□□□□ 0.12
RTFDC1-202ENST00000357348 C22orf23Q9BZE7 217 aa15.78■□□□□ 0.12
RTFDC1-202ENST00000357348 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.78■□□□□ 0.12
RTFDC1-202ENST00000357348 FTSJ3Q8IY81 847 aaKnown RBP15.78■□□□□ 0.12
RTFDC1-202ENST00000357348 TTC5Q8N0Z6 440 aa15.78■□□□□ 0.12
RTFDC1-202ENST00000357348 CDCA7Q9BWT1 371 aaPredicted RBP15.78■□□□□ 0.12
RTFDC1-202ENST00000357348 EIF5BO60841 1220 aaKnown RBP15.77■□□□□ 0.12
RTFDC1-202ENST00000357348 DDIT3P35638 169 aa15.77■□□□□ 0.12
RTFDC1-202ENST00000357348 DZIP1LQ8IYY4 767 aaKnown RBP15.77■□□□□ 0.12
RTFDC1-202ENST00000357348 FBXO41Q8TF61 875 aa15.77■□□□□ 0.12
RTFDC1-202ENST00000357348 BABAM1Q9NWV8 329 aa15.77■□□□□ 0.12
RTFDC1-202ENST00000357348 ITGB4P16144 1822 aa15.77■□□□□ 0.11
RTFDC1-202ENST00000357348 ALDH1L2Q3SY69 923 aa15.76■□□□□ 0.11
RTFDC1-202ENST00000357348 MRPL50Q8N5N7 158 aaKnown RBP15.76■□□□□ 0.11
RTFDC1-202ENST00000357348 ZNF496Q96IT1 587 aaPredicted RBP15.76■□□□□ 0.11
RTFDC1-202ENST00000357348 TMOD3Q9NYL9 352 aa15.76■□□□□ 0.11
RTFDC1-202ENST00000357348 TRPC5Q9UL62 973 aaPredicted RBP15.76■□□□□ 0.11
RTFDC1-202ENST00000357348 GLI3P10071 1580 aa15.76■□□□□ 0.11
RTFDC1-202ENST00000357348 ERVV-2B6SEH9 535 aa15.76■□□□□ 0.11
RTFDC1-202ENST00000357348 PTCD1O75127 700 aaKnown RBP15.76■□□□□ 0.11
RTFDC1-202ENST00000357348 SLC4A2P04920 1241 aa15.76■□□□□ 0.11
RTFDC1-202ENST00000357348 CLCN1P35523 988 aa15.76■□□□□ 0.11
RTFDC1-202ENST00000357348 SMC5Q8IY18 1101 aa15.76■□□□□ 0.11
RTFDC1-202ENST00000357348 ISY1Q9ULR0 285 aaKnown RBP15.76■□□□□ 0.11
RTFDC1-202ENST00000357348 PRIM1P49642 420 aaKnown RBP15.75■□□□□ 0.11
RTFDC1-202ENST00000357348 HDGFL1Q5TGJ6 251 aa15.75■□□□□ 0.11
RTFDC1-202ENST00000357348 DOT1LQ8TEK3 1739 aa15.75■□□□□ 0.11
RTFDC1-202ENST00000357348 ANXA1P04083 346 aa15.75■□□□□ 0.11
RTFDC1-202ENST00000357348 PIGBQ92521 554 aa15.75■□□□□ 0.11
RTFDC1-202ENST00000357348 MRC1P22897 1456 aa15.75■□□□□ 0.11
RTFDC1-202ENST00000357348 TRIM27P14373 513 aa15.74■□□□□ 0.11
RTFDC1-202ENST00000357348 TRAK2O60296 914 aa15.74■□□□□ 0.11
RTFDC1-202ENST00000357348 GIGYF1O75420 1035 aaPredicted RBP15.74■□□□□ 0.11
RTFDC1-202ENST00000357348 G2E3Q7L622 706 aa15.74■□□□□ 0.11
RTFDC1-202ENST00000357348 ASAP1Q9ULH1 1129 aa15.74■□□□□ 0.11
RTFDC1-202ENST00000357348 RBM25P49756 843 aaKnown RBP15.73■□□□□ 0.11
RTFDC1-202ENST00000357348 MRE11P49959 708 aa15.73■□□□□ 0.11
RTFDC1-202ENST00000357348 SNX21Q969T3 373 aa15.73■□□□□ 0.11
RTFDC1-202ENST00000357348 ZNF428Q96B54 188 aa15.73■□□□□ 0.11
RTFDC1-202ENST00000357348 DDX19BQ9UMR2 479 aa15.73■□□□□ 0.11
RTFDC1-202ENST00000357348 ATRNO75882 1429 aa15.72■□□□□ 0.11
RTFDC1-202ENST00000357348 PIP4K2AP48426 406 aaPredicted RBP15.72■□□□□ 0.11
RTFDC1-202ENST00000357348 CCDC30Q5VVM6 783 aa15.72■□□□□ 0.11
RTFDC1-202ENST00000357348 ATF7IPQ6VMQ6 1270 aa15.72■□□□□ 0.11
RTFDC1-202ENST00000357348 STK31Q9BXU1 1019 aa15.72■□□□□ 0.11
RTFDC1-202ENST00000357348 KIF16BQ96L93 1317 aa15.72■□□□□ 0.11
RTFDC1-202ENST00000357348 C5P01031 1676 aa15.72■□□□□ 0.11
RTFDC1-202ENST00000357348 DDX11L8A8MPP1 907 aa15.72■□□□□ 0.11
RTFDC1-202ENST00000357348 KCNQ2O43526 872 aa15.72■□□□□ 0.11
RTFDC1-202ENST00000357348 CHPF2Q9P2E5 772 aa15.72■□□□□ 0.11
RTFDC1-202ENST00000357348 SEPT12Q8IYM1 358 aa15.71■□□□□ 0.11
RTFDC1-202ENST00000357348 FMNL2Q96PY5 1086 aa15.71■□□□□ 0.1
RTFDC1-202ENST00000357348 PHAXQ9H814 394 aaKnown RBP15.71■□□□□ 0.1
RTFDC1-202ENST00000357348 USP16Q9Y5T5 823 aa15.71■□□□□ 0.1
RTFDC1-202ENST00000357348 MFAP1P55081 439 aaKnown RBP15.7■□□□□ 0.1
RTFDC1-202ENST00000357348 ITPRIPQ8IWB1 547 aa15.7■□□□□ 0.1
RTFDC1-202ENST00000357348 RBM42Q9BTD8 480 aaKnown RBP15.7■□□□□ 0.1
RTFDC1-202ENST00000357348 IPO8O15397 1037 aaKnown RBP15.7■□□□□ 0.1
RTFDC1-202ENST00000357348 PTF1AQ7RTS3 328 aa15.7■□□□□ 0.1
RTFDC1-202ENST00000357348 PANK2Q9BZ23 570 aa15.7■□□□□ 0.1
RTFDC1-202ENST00000357348 CIZ1Q9ULV3 898 aaPredicted RBP15.7■□□□□ 0.1
RTFDC1-202ENST00000357348 PROSER3Q2NL68 480 aa15.69■□□□□ 0.1
RTFDC1-202ENST00000357348 HSCBQ8IWL3 235 aa15.69■□□□□ 0.1
RTFDC1-202ENST00000357348 ATG3Q9NT62 314 aa15.69■□□□□ 0.1
RTFDC1-202ENST00000357348 HEG1Q9ULI3 1381 aa15.69■□□□□ 0.1
RTFDC1-202ENST00000357348 THSD7AQ9UPZ6 1657 aa15.69■□□□□ 0.1
RTFDC1-202ENST00000357348 MYL6BP14649 208 aa15.68■□□□□ 0.1
RTFDC1-202ENST00000357348 TMEM57Q8N5G2 664 aa15.68■□□□□ 0.1
RTFDC1-202ENST00000357348 ZBTB40Q9NUA8 1239 aa15.68■□□□□ 0.1
RTFDC1-202ENST00000357348 BCL9O00512 1426 aa15.68■□□□□ 0.1
RTFDC1-202ENST00000357348 F6X3S4 739 aa15.68■□□□□ 0.1
RTFDC1-202ENST00000357348 SNRPA1P09661 255 aaKnown RBP15.67■□□□□ 0.1
RTFDC1-202ENST00000357348 FKBP5Q13451 457 aaPredicted RBP15.67■□□□□ 0.1
RTFDC1-202ENST00000357348 BRPF1P55201 1214 aaPredicted RBP15.67■□□□□ 0.1
RTFDC1-202ENST00000357348 NUCB1Q02818 461 aa15.67■□□□□ 0.1
RTFDC1-202ENST00000357348 FLIIQ13045 1269 aa15.67■□□□□ 0.1
RTFDC1-202ENST00000357348 ZNF772Q68DY9 489 aaPredicted RBP15.67■□□□□ 0.1
RTFDC1-202ENST00000357348 SLC4A10Q6U841 1118 aa15.67■□□□□ 0.1
RTFDC1-202ENST00000357348 UBR2Q8IWV8 1755 aa15.66■□□□□ 0.1
RTFDC1-202ENST00000357348 KCPQ6ZWJ8 1503 aa15.66■□□□□ 0.1
RTFDC1-202ENST00000357348 AIMP1Q12904 312 aaKnown RBP15.66■□□□□ 0.1
RTFDC1-202ENST00000357348 SPRYD3Q8NCJ5 442 aa15.66■□□□□ 0.1
RTFDC1-202ENST00000357348 GRPEL1Q9HAV7 217 aa15.66■□□□□ 0.1
RTFDC1-202ENST00000357348 PAPPAQ13219 1627 aa15.66■□□□□ 0.1
RTFDC1-202ENST00000357348 BRWD3Q6RI45 1802 aa15.66■□□□□ 0.1
RTFDC1-202ENST00000357348 CACNA1FO60840 1977 aa15.66■□□□□ 0.1
RTFDC1-202ENST00000357348 HOXB7P09629 217 aa15.66■□□□□ 0.1
RTFDC1-202ENST00000357348 DBF4Q9UBU7 674 aaPredicted RBP15.65■□□□□ 0.1
RTFDC1-202ENST00000357348 ONECUT3O60422 494 aaPredicted RBP15.64■□□□□ 0.09
RTFDC1-202ENST00000357348 GZF1Q9H116 711 aaPredicted RBP15.64■□□□□ 0.09
RTFDC1-202ENST00000357348 SOS1Q07889 1333 aaPredicted RBP15.64■□□□□ 0.09
RTFDC1-202ENST00000357348 A1BGP04217 495 aa15.63■□□□□ 0.09
RTFDC1-202ENST00000357348 PTMSP20962 102 aa15.63■□□□□ 0.09
RTFDC1-202ENST00000357348 RAB3GAP1Q15042 981 aa15.63■□□□□ 0.09
RTFDC1-202ENST00000357348 DNAJC10Q8IXB1 793 aa15.63■□□□□ 0.09
RTFDC1-202ENST00000357348 ARHGAP45Q92619 1136 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms