RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 RGS22Q8NE09 1264 aa9.89□□□□□ -0.83
CDC42SE1-201ENST00000357235 RGS12O14924 1447 aa9.88□□□□□ -0.83
CDC42SE1-201ENST00000357235 GTF2F1P35269 517 aaKnown RBP eCLIP9.88□□□□□ -0.839e-8■■■□□ 17.1
CDC42SE1-201ENST00000357235 KIF24Q5T7B8 1368 aa9.88□□□□□ -0.83
CDC42SE1-201ENST00000357235 WDR33Q9C0J8 1336 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-201ENST00000357235 CCDC66A2RUB6 948 aa9.88□□□□□ -0.83
CDC42SE1-201ENST00000357235 EIF2S2P20042 333 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-201ENST00000357235 AMPHP49418 695 aa9.88□□□□□ -0.83
CDC42SE1-201ENST00000357235 NUTM2GQ5VZR2 741 aa9.88□□□□□ -0.83
CDC42SE1-201ENST00000357235 CWC27Q6UX04 472 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-201ENST00000357235 SRCIN1Q9C0H9 1055 aa9.88□□□□□ -0.83
CDC42SE1-201ENST00000357235 SPG7Q9UQ90 795 aa9.88□□□□□ -0.83
CDC42SE1-201ENST00000357235 ADCY5O95622 1261 aa9.88□□□□□ -0.83
CDC42SE1-201ENST00000357235 GNAI3P08754 354 aa9.88□□□□□ -0.83
CDC42SE1-201ENST00000357235 OS9Q13438 667 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-201ENST00000357235 SPC24Q8NBT2 197 aa9.88□□□□□ -0.83
CDC42SE1-201ENST00000357235 ESF1Q9H501 851 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-201ENST00000357235 ALKQ9UM73 1620 aa9.87□□□□□ -0.83
CDC42SE1-201ENST00000357235 UBTFL1P0CB47 393 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-201ENST00000357235 GIMAP6Q6P9H5 292 aa9.87□□□□□ -0.83
CDC42SE1-201ENST00000357235 CDK12Q9NYV4 1490 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-201ENST00000357235 OSBPL3Q9H4L5 887 aa9.87□□□□□ -0.83
CDC42SE1-201ENST00000357235 METP08581 1390 aa9.86□□□□□ -0.83
CDC42SE1-201ENST00000357235 ACEP12821 1306 aa9.86□□□□□ -0.83
CDC42SE1-201ENST00000357235 MAP3K19Q56UN5 1328 aa9.86□□□□□ -0.83
CDC42SE1-201ENST00000357235 VPS37CA5D8V6 355 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-201ENST00000357235 CUL4AQ13619 759 aa9.86□□□□□ -0.83
CDC42SE1-201ENST00000357235 SMC3Q9UQE7 1217 aa9.86□□□□□ -0.83
CDC42SE1-201ENST00000357235 ATP7BP35670 1465 aa9.86□□□□□ -0.83
CDC42SE1-201ENST00000357235 MYO5BQ9ULV0 1848 aa9.86□□□□□ -0.83
CDC42SE1-201ENST00000357235 U2AF2P26368 475 aaKnown RBP eCLIP9.86□□□□□ -0.832e-6■■□□□ 11.5
CDC42SE1-201ENST00000357235 TIGD1Q96MW7 591 aa9.86□□□□□ -0.83
CDC42SE1-201ENST00000357235 BCL2L12Q9HB09 334 aa9.86□□□□□ -0.83
CDC42SE1-201ENST00000357235 CPS1P31327 1500 aa9.86□□□□□ -0.83
CDC42SE1-201ENST00000357235 TTC21BQ7Z4L5 1316 aa9.86□□□□□ -0.83
CDC42SE1-201ENST00000357235 KDM4FA0A1W2PPD8 638 aa9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 CCDC30Q5VVM6 783 aa9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 C14orf37Q86TY3 774 aa9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 CERS3Q8IU89 383 aa9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 INTS4Q96HW7 963 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 FEZ1Q99689 392 aa9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 AATKQ6ZMQ8 1374 aa9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 PRR36Q9H6K5 1346 aa9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 SRGAP3O43295 1099 aa9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 ATP8B2P98198 1209 aa9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 NOLC1Q14978 699 aaKnown RBP eCLIP9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 CCDC83Q8IWF9 413 aa9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 ARHGAP31Q2M1Z3 1444 aa9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 CASTP20810 708 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 AK2P54819 239 aa9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 ANAPC15P60006 121 aa9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 GABPB1Q06547 395 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 CCDC183Q5T5S1 534 aa9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 DHX37Q8IY37 1157 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 KIAA0232Q92628 1395 aa9.85□□□□□ -0.83
CDC42SE1-201ENST00000357235 CPSF1Q10570 1443 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-201ENST00000357235 STX6O43752 255 aa9.84□□□□□ -0.83
CDC42SE1-201ENST00000357235 SYT1P21579 422 aa9.84□□□□□ -0.83
CDC42SE1-201ENST00000357235 PPP1R42Q7Z4L9 355 aa9.84□□□□□ -0.83
CDC42SE1-201ENST00000357235 PHAXQ9H814 394 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-201ENST00000357235 KIF20BQ96Q89 1820 aa9.84□□□□□ -0.83
CDC42SE1-201ENST00000357235 CDC42BPGQ6DT37 1551 aa9.84□□□□□ -0.83
CDC42SE1-201ENST00000357235 ANKRD26Q9UPS8 1709 aa9.84□□□□□ -0.83
CDC42SE1-201ENST00000357235 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.84□□□□□ -0.83
CDC42SE1-201ENST00000357235 DNM1Q05193 864 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-201ENST00000357235 FERMT3Q86UX7 667 aa9.84□□□□□ -0.83
CDC42SE1-201ENST00000357235 RASEFQ8IZ41 740 aa9.84□□□□□ -0.83
CDC42SE1-201ENST00000357235 NGDNQ8NEJ9 315 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-201ENST00000357235 OGFRQ9NZT2 677 aa9.84□□□□□ -0.83
CDC42SE1-201ENST00000357235 ANXA1P04083 346 aa9.83□□□□□ -0.84
CDC42SE1-201ENST00000357235 ZSCAN22P10073 491 aaPredicted RBP9.83□□□□□ -0.84
CDC42SE1-201ENST00000357235 CAMK4Q16566 473 aa9.83□□□□□ -0.84
CDC42SE1-201ENST00000357235 HDGFL1Q5TGJ6 251 aa9.83□□□□□ -0.84
CDC42SE1-201ENST00000357235 USP44Q9H0E7 712 aa9.83□□□□□ -0.84
CDC42SE1-201ENST00000357235 REREQ9P2R6 1566 aa9.83□□□□□ -0.84
CDC42SE1-201ENST00000357235 HSPA4P34932 840 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 USHBP1Q8N6Y0 703 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 NECAB1Q8N987 351 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 FAM184AQ8NB25 1140 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 EYA1Q99502 592 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 DIAPH3Q9NSV4 1193 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 SNX14Q9Y5W7 946 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 TMEM131LA2VDJ0 1609 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 FAM173BQ6P4H8 233 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 DRC7Q8IY82 874 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 RHPN1Q8TCX5 695 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 JAKMIP1Q96N16 626 aaKnown RBP9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 SLC26A8Q96RN1 970 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 LIMCH1Q9UPQ0 1083 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 DLG5Q8TDM6 1919 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 LARGE1O95461 756 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 GJB2P29033 226 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 UBE2HP62256 183 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 PRPF40BQ6NWY9 871 aaKnown RBP9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 RUFY3Q7L099 469 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 CNTROBQ8N137 903 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 PIBF1Q8WXW3 757 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 TCEANC2Q96MN5 208 aa9.82□□□□□ -0.84
CDC42SE1-201ENST00000357235 TRIM34Q9BYJ4 488 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms