RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 CLGNO14967 610 aa13.26□□□□□ -0.29
NUDCD3-202ENST00000355451 MCM3P25205 808 aa13.26□□□□□ -0.29
NUDCD3-202ENST00000355451 PAFAH1B1P43034 410 aa13.26□□□□□ -0.29
NUDCD3-202ENST00000355451 USO1O60763 962 aaKnown RBP13.26□□□□□ -0.29
NUDCD3-202ENST00000355451 GNAI2P04899 355 aa13.26□□□□□ -0.29
NUDCD3-202ENST00000355451 HLA-DOAP06340 250 aa13.26□□□□□ -0.29
NUDCD3-202ENST00000355451 KIAA1524Q8TCG1 905 aa13.26□□□□□ -0.29
NUDCD3-202ENST00000355451 TBC1D5Q92609 795 aa13.26□□□□□ -0.29
NUDCD3-202ENST00000355451 VIMP08670 466 aaKnown RBP13.26□□□□□ -0.29
NUDCD3-202ENST00000355451 AEBP1Q8IUX7 1158 aa13.26□□□□□ -0.29
NUDCD3-202ENST00000355451 RANBP6O60518 1105 aaKnown RBP13.26□□□□□ -0.29
NUDCD3-202ENST00000355451 NOP9Q86U38 636 aaKnown RBP13.26□□□□□ -0.29
NUDCD3-202ENST00000355451 RRBP1Q9P2E9 1410 aaKnown RBP13.26□□□□□ -0.29
NUDCD3-202ENST00000355451 MCM2P49736 904 aa13.25□□□□□ -0.29
NUDCD3-202ENST00000355451 KIF4BQ2VIQ3 1234 aa13.25□□□□□ -0.29
NUDCD3-202ENST00000355451 DDX11Q96FC9 970 aa13.25□□□□□ -0.29
NUDCD3-202ENST00000355451 TTC12Q9H892 705 aaPredicted RBP13.25□□□□□ -0.29
NUDCD3-202ENST00000355451 PRKCSHP14314 528 aaPredicted RBP13.25□□□□□ -0.29
NUDCD3-202ENST00000355451 CTCFLQ8NI51 663 aaPredicted RBP13.25□□□□□ -0.29
NUDCD3-202ENST00000355451 IMPG2Q9BZV3 1241 aa13.25□□□□□ -0.29
NUDCD3-202ENST00000355451 C22orf23Q9BZE7 217 aa13.25□□□□□ -0.29
NUDCD3-202ENST00000355451 A0A087WZG4 1122 aa13.25□□□□□ -0.29
NUDCD3-202ENST00000355451 PLVAPQ9BX97 442 aa13.25□□□□□ -0.29
NUDCD3-202ENST00000355451 UPF3BQ9BZI7 483 aaKnown RBP13.25□□□□□ -0.29
NUDCD3-202ENST00000355451 FEZ2Q9UHY8 353 aaPredicted RBP13.25□□□□□ -0.29
NUDCD3-202ENST00000355451 ERICH4A6NGS2 130 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 CFAP70Q5T0N1 1121 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 PPME1Q9Y570 386 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 CEP83Q9Y592 693 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 HMGB1P1B2RPK0 211 aaPredicted RBP13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 MICALCLQ6ZW33 695 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 IQCA1Q86XH1 822 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 CALML4Q96GE6 196 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 NAA15Q9BXJ9 866 aaKnown RBP13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 CASQ1P31415 396 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 KRT85P78386 507 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 USP37Q86T82 979 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 OGFOD1Q8N543 542 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 MBD3O95983 291 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 ATXN8OSP0DMR3 200 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 TBC1D31Q96DN5 1066 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 NUP88Q99567 741 aaPredicted RBP13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 FLIIQ13045 1269 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 CEP112Q8N8E3 955 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 DCAF1Q9Y4B6 1507 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 LARP1BQ659C4 914 aaKnown RBP13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 VAT1LQ9HCJ6 419 aa13.24□□□□□ -0.29
NUDCD3-202ENST00000355451 HDGFL1Q5TGJ6 251 aa13.23□□□□□ -0.29
NUDCD3-202ENST00000355451 TMCO4Q5TGY1 634 aa13.23□□□□□ -0.29
NUDCD3-202ENST00000355451 PSPC1Q8WXF1 523 aaKnown RBP13.23□□□□□ -0.29
NUDCD3-202ENST00000355451 GBP3Q9H0R5 595 aa13.23□□□□□ -0.29
NUDCD3-202ENST00000355451 CGNQ9P2M7 1197 aaKnown RBP13.23□□□□□ -0.29
NUDCD3-202ENST00000355451 ARID5AQ03989 594 aa13.23□□□□□ -0.29
NUDCD3-202ENST00000355451 GSTA5Q7RTV2 222 aa13.23□□□□□ -0.29
NUDCD3-202ENST00000355451 PPP4R4Q6NUP7 873 aa13.23□□□□□ -0.29
NUDCD3-202ENST00000355451 WRNQ14191 1432 aaPredicted RBP eCLIP13.23□□□□□ -0.29
NUDCD3-202ENST00000355451 NAPBQ9H115 298 aa13.23□□□□□ -0.29
NUDCD3-202ENST00000355451 MYBBP1AQ9BQG0 1328 aaKnown RBP13.23□□□□□ -0.29
NUDCD3-202ENST00000355451 APAF1O14727 1248 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 IFIT1P09914 478 aaKnown RBP13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 AACSQ86V21 672 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 KIF3CO14782 793 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 GIPC1O14908 333 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 ST5P78524 1137 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 CFAP157Q5JU67 520 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 FAM169AQ9Y6X4 670 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 RASA3Q14644 834 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 SMC6Q96SB8 1091 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 GPHNQ9NQX3 736 aaPredicted RBP13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 CWC25Q9NXE8 425 aaPredicted RBP13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 PRPF40AO75400 957 aaKnown RBP13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 CCDC40Q4G0X9 1142 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 FAM184BQ9ULE4 1060 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 SETD5Q9C0A6 1442 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 RNF34Q969K3 372 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 MRVI1Q9Y6F6 885 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 CCDC196A0A1B0GTZ2 297 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 GOLGA8AA7E2F4 631 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 GOLGA8BA8MQT2 603 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 RUNDC1Q96C34 613 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 HDAC9Q9UKV0 1011 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 POLD1P28340 1107 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 TACC3Q9Y6A5 838 aa13.22□□□□□ -0.29
NUDCD3-202ENST00000355451 DHX57Q6P158 1386 aaKnown RBP13.21□□□□□ -0.29
NUDCD3-202ENST00000355451 KIAA0753Q2KHM9 967 aa13.21□□□□□ -0.29
NUDCD3-202ENST00000355451 SLC4A8Q2Y0W8 1093 aa13.21□□□□□ -0.29
NUDCD3-202ENST00000355451 MAK16Q9BXY0 300 aaKnown RBP13.21□□□□□ -0.29
NUDCD3-202ENST00000355451 IRAK4Q9NWZ3 460 aa13.21□□□□□ -0.29
NUDCD3-202ENST00000355451 STK25O00506 426 aa13.21□□□□□ -0.29
NUDCD3-202ENST00000355451 WDR46O15213 610 aaKnown RBP13.21□□□□□ -0.29
NUDCD3-202ENST00000355451 CCDC172P0C7W6 258 aa13.21□□□□□ -0.29
NUDCD3-202ENST00000355451 GTF2F1P35269 517 aaKnown RBP eCLIP13.21□□□□□ -0.292e-8■■■■■ 30.8
NUDCD3-202ENST00000355451 TMOD3Q9NYL9 352 aa13.21□□□□□ -0.29
NUDCD3-202ENST00000355451 RB1CC1Q8TDY2 1594 aa13.21□□□□□ -0.29
NUDCD3-202ENST00000355451 CCDC194A0A1B0GVG4 234 aa13.21□□□□□ -0.29
NUDCD3-202ENST00000355451 BTBD11A6QL63 1104 aa13.21□□□□□ -0.29
NUDCD3-202ENST00000355451 SRCIN1Q9C0H9 1055 aa13.21□□□□□ -0.29
NUDCD3-202ENST00000355451 SEPT8Q92599 483 aa13.21□□□□□ -0.3
NUDCD3-202ENST00000355451 CEP164Q9UPV0 1460 aa13.21□□□□□ -0.3
NUDCD3-202ENST00000355451 MSL1Q68DK7 614 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms