RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 RHPN1Q8TCX5 695 aa23.8■■□□□ 1.4
COL13A1-201ENST00000354547 SSH3Q8TE77 659 aa23.8■■□□□ 1.4
COL13A1-201ENST00000354547 ANP32BQ92688 251 aaKnown RBP23.8■■□□□ 1.4
COL13A1-201ENST00000354547 SLIT1O75093 1534 aa23.8■■□□□ 1.4
COL13A1-201ENST00000354547 BTBD11A6QL63 1104 aa23.79■■□□□ 1.4
COL13A1-201ENST00000354547 IP6K1Q92551 441 aa23.79■■□□□ 1.4
COL13A1-201ENST00000354547 STAP2Q9UGK3 403 aa23.79■■□□□ 1.4
COL13A1-201ENST00000354547 NWD1Q149M9 1564 aa23.79■■□□□ 1.4
COL13A1-201ENST00000354547 DTNBO60941 627 aa23.78■■□□□ 1.4
COL13A1-201ENST00000354547 DNAAF4Q8WXU2 420 aa23.78■■□□□ 1.4
COL13A1-201ENST00000354547 PRIM1P49642 420 aaKnown RBP23.76■■□□□ 1.39
COL13A1-201ENST00000354547 CWC27Q6UX04 472 aaKnown RBP23.76■■□□□ 1.39
COL13A1-201ENST00000354547 GDPD2Q9HCC8 539 aa23.76■■□□□ 1.39
COL13A1-201ENST00000354547 FAM208AQ9UK61 1670 aaKnown RBP23.75■■□□□ 1.39
COL13A1-201ENST00000354547 XRN1Q8IZH2 1706 aaKnown RBP23.75■■□□□ 1.39
COL13A1-201ENST00000354547 PRAMEF22A3QJZ6 481 aa23.75■■□□□ 1.39
COL13A1-201ENST00000354547 PRKCSHP14314 528 aaPredicted RBP23.75■■□□□ 1.39
COL13A1-201ENST00000354547 RBSNQ9H1K0 784 aa23.75■■□□□ 1.39
COL13A1-201ENST00000354547 SPG7Q9UQ90 795 aa23.75■■□□□ 1.39
COL13A1-201ENST00000354547 SYCE3A1L190 88 aa23.74■■□□□ 1.39
COL13A1-201ENST00000354547 BEND3Q5T5X7 828 aa23.74■■□□□ 1.39
COL13A1-201ENST00000354547 ANKARQ7Z5J8 1434 aa23.74■■□□□ 1.39
COL13A1-201ENST00000354547 TMEM63CQ9P1W3 806 aa23.73■■□□□ 1.39
COL13A1-201ENST00000354547 PROSER3Q2NL68 480 aa23.73■■□□□ 1.39
COL13A1-201ENST00000354547 PI4K2BQ8TCG2 481 aa23.73■■□□□ 1.39
COL13A1-201ENST00000354547 KIF1BPQ96EK5 621 aa23.73■■□□□ 1.39
COL13A1-201ENST00000354547 BABAM1Q9NWV8 329 aa23.73■■□□□ 1.39
COL13A1-201ENST00000354547 C9orf78Q9NZ63 289 aaPredicted RBP23.73■■□□□ 1.39
COL13A1-201ENST00000354547 PA2G4Q9UQ80 394 aaKnown RBP23.73■■□□□ 1.39
COL13A1-201ENST00000354547 RAB11FIP3O75154 756 aa23.72■■□□□ 1.39
COL13A1-201ENST00000354547 MCM2P49736 904 aa23.72■■□□□ 1.39
COL13A1-201ENST00000354547 CCDC173Q0VFZ6 552 aa23.72■■□□□ 1.39
COL13A1-201ENST00000354547 AIMP1Q12904 312 aaKnown RBP23.72■■□□□ 1.39
COL13A1-201ENST00000354547 POLA2Q14181 598 aa23.72■■□□□ 1.39
COL13A1-201ENST00000354547 ORAI2Q96SN7 254 aa23.72■■□□□ 1.39
COL13A1-201ENST00000354547 ZNF445P59923 1031 aa23.71■■□□□ 1.39
COL13A1-201ENST00000354547 CWF19L2Q2TBE0 894 aaKnown RBP23.71■■□□□ 1.39
COL13A1-201ENST00000354547 CPA1P15085 419 aa23.71■■□□□ 1.39
COL13A1-201ENST00000354547 TRHP20396 242 aaPredicted RBP23.71■■□□□ 1.39
COL13A1-201ENST00000354547 MAP3K2Q9Y2U5 619 aa23.71■■□□□ 1.39
COL13A1-201ENST00000354547 LRRC37A3O60309 1634 aa23.71■■□□□ 1.39
COL13A1-201ENST00000354547 ANAPC15P60006 121 aa23.7■■□□□ 1.39
COL13A1-201ENST00000354547 C1orf141Q5JVX7 400 aa23.7■■□□□ 1.39
COL13A1-201ENST00000354547 PLEKHO1Q53GL0 409 aaPredicted RBP23.7■■□□□ 1.38
COL13A1-201ENST00000354547 RNF214Q8ND24 703 aa23.7■■□□□ 1.38
COL13A1-201ENST00000354547 CEMIPQ8WUJ3 1361 aa23.7■■□□□ 1.38
COL13A1-201ENST00000354547 DDX54Q8TDD1 881 aaKnown RBP23.7■■□□□ 1.38
COL13A1-201ENST00000354547 BRD1O95696 1058 aa23.69■■□□□ 1.38
COL13A1-201ENST00000354547 CUL4AQ13619 759 aa23.69■■□□□ 1.38
COL13A1-201ENST00000354547 KIAA1211Q6ZU35 1233 aa23.69■■□□□ 1.38
COL13A1-201ENST00000354547 CNTROBQ8N137 903 aa23.69■■□□□ 1.38
COL13A1-201ENST00000354547 ANKLE2Q86XL3 938 aa23.68■■□□□ 1.38
COL13A1-201ENST00000354547 RASEFQ8IZ41 740 aa23.68■■□□□ 1.38
COL13A1-201ENST00000354547 HSPA4P34932 840 aa23.68■■□□□ 1.38
COL13A1-201ENST00000354547 AKAP4Q5JQC9 854 aa23.68■■□□□ 1.38
COL13A1-201ENST00000354547 SGSM2O43147 1006 aa23.67■■□□□ 1.38
COL13A1-201ENST00000354547 GCP02774 474 aa23.67■■□□□ 1.38
COL13A1-201ENST00000354547 MARF1Q9Y4F3 1742 aaKnown RBP23.67■■□□□ 1.38
COL13A1-201ENST00000354547 ADCY9O60503 1353 aa23.67■■□□□ 1.38
COL13A1-201ENST00000354547 DBF4Q9UBU7 674 aaPredicted RBP23.66■■□□□ 1.38
COL13A1-201ENST00000354547 SNX14Q9Y5W7 946 aa23.66■■□□□ 1.38
COL13A1-201ENST00000354547 FER1L4A9Z1Z3 1794 aa23.66■■□□□ 1.38
COL13A1-201ENST00000354547 RNMTO43148 476 aaKnown RBP23.66■■□□□ 1.38
COL13A1-201ENST00000354547 KCNH5Q8NCM2 988 aa23.66■■□□□ 1.38
COL13A1-201ENST00000354547 PPP1R9BQ96SB3 815 aa23.65■■□□□ 1.38
COL13A1-201ENST00000354547 DIAPH3Q9NSV4 1193 aa23.65■■□□□ 1.38
COL13A1-201ENST00000354547 AOX1Q06278 1338 aa23.65■■□□□ 1.38
COL13A1-201ENST00000354547 LTN1O94822 1766 aa23.65■■□□□ 1.38
COL13A1-201ENST00000354547 CLASRPQ8N2M8 674 aaKnown RBP23.65■■□□□ 1.38
COL13A1-201ENST00000354547 CACNA1FO60840 1977 aa23.64■■□□□ 1.38
COL13A1-201ENST00000354547 PXDNLA1KZ92 1463 aa23.64■■□□□ 1.38
COL13A1-201ENST00000354547 GADD45BO75293 160 aaPredicted RBP23.64■■□□□ 1.38
COL13A1-201ENST00000354547 ANKRD24Q8TF21 1146 aa23.64■■□□□ 1.38
COL13A1-201ENST00000354547 INTS4Q96HW7 963 aaKnown RBP23.63■■□□□ 1.37
COL13A1-201ENST00000354547 LSG1Q9H089 658 aaKnown RBP23.63■■□□□ 1.37
COL13A1-201ENST00000354547 RAD50Q92878 1312 aa23.63■■□□□ 1.37
COL13A1-201ENST00000354547 AK2P54819 239 aa23.63■■□□□ 1.37
COL13A1-201ENST00000354547 SIL1Q9H173 461 aa23.63■■□□□ 1.37
COL13A1-201ENST00000354547 AXIN2Q9Y2T1 843 aa23.63■■□□□ 1.37
COL13A1-201ENST00000354547 IFIT2P09913 472 aaKnown RBP23.62■■□□□ 1.37
COL13A1-201ENST00000354547 GIGYF1O75420 1035 aaPredicted RBP23.62■■□□□ 1.37
COL13A1-201ENST00000354547 CASTP20810 708 aaKnown RBP23.62■■□□□ 1.37
COL13A1-201ENST00000354547 SLC39A6Q13433 755 aa23.62■■□□□ 1.37
COL13A1-201ENST00000354547 ZC3H6P61129 1189 aaKnown RBP23.62■■□□□ 1.37
COL13A1-201ENST00000354547 HSP90AB4PQ58FF6 505 aa23.62■■□□□ 1.37
COL13A1-201ENST00000354547 LRSAM1Q6UWE0 723 aa23.62■■□□□ 1.37
COL13A1-201ENST00000354547 AACSQ86V21 672 aa23.61■■□□□ 1.37
COL13A1-201ENST00000354547 RGPD2P0DJD1 1756 aa23.61■■□□□ 1.37
COL13A1-201ENST00000354547 PTH1RQ03431 593 aa23.61■■□□□ 1.37
COL13A1-201ENST00000354547 HOXB7P09629 217 aa23.6■■□□□ 1.37
COL13A1-201ENST00000354547 MSNP26038 577 aaKnown RBP23.6■■□□□ 1.37
COL13A1-201ENST00000354547 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.6■■□□□ 1.37
COL13A1-201ENST00000354547 GLRX3O76003 335 aaKnown RBP23.6■■□□□ 1.37
COL13A1-201ENST00000354547 MYL6BP14649 208 aa23.6■■□□□ 1.37
COL13A1-201ENST00000354547 PRPF40BQ6NWY9 871 aaKnown RBP23.6■■□□□ 1.37
COL13A1-201ENST00000354547 USP48Q86UV5 1035 aa23.6■■□□□ 1.37
COL13A1-201ENST00000354547 CCDC8Q9H0W5 538 aaPredicted RBP23.6■■□□□ 1.37
COL13A1-201ENST00000354547 PXDNQ92626 1479 aa23.6■■□□□ 1.37
COL13A1-201ENST00000354547 TUBGCP6Q96RT7 1819 aa23.6■■□□□ 1.37
COL13A1-201ENST00000354547 MBD3O95983 291 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms