RNA–Protein interactions for RNA: ENST00000353855.6

DNMT3B-204, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 5 BASIC

Gene DNMT3B, Length 4,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-204ENST00000353855 ANKRD1Q15327 319 aa16.72■□□□□ 0.27
DNMT3B-204ENST00000353855 ZNF396Q96N95 335 aaPredicted RBP16.72■□□□□ 0.27
DNMT3B-204ENST00000353855 ACBD3Q9H3P7 528 aa16.72■□□□□ 0.27
DNMT3B-204ENST00000353855 ATP2B1P20020 1258 aa16.72■□□□□ 0.27
DNMT3B-204ENST00000353855 AACSQ86V21 672 aa16.72■□□□□ 0.27
DNMT3B-204ENST00000353855 INTS4Q96HW7 963 aaKnown RBP16.72■□□□□ 0.27
DNMT3B-204ENST00000353855 SH2B1Q9NRF2 756 aaPredicted RBP16.72■□□□□ 0.27
DNMT3B-204ENST00000353855 SYTL4Q96C24 671 aaPredicted RBP16.71■□□□□ 0.27
DNMT3B-204ENST00000353855 ELF2Q15723 593 aa16.71■□□□□ 0.27
DNMT3B-204ENST00000353855 ISM2Q6H9L7 571 aa16.71■□□□□ 0.27
DNMT3B-204ENST00000353855 FYB1O15117 783 aa16.71■□□□□ 0.26
DNMT3B-204ENST00000353855 NUTM2GQ5VZR2 741 aa16.71■□□□□ 0.26
DNMT3B-204ENST00000353855 RASSF8Q8NHQ8 419 aa16.71■□□□□ 0.26
DNMT3B-204ENST00000353855 ANO10Q9NW15 660 aa16.71■□□□□ 0.26
DNMT3B-204ENST00000353855 ZMYM3Q14202 1370 aa16.71■□□□□ 0.26
DNMT3B-204ENST00000353855 RAPGEF3O95398 923 aa16.7■□□□□ 0.26
DNMT3B-204ENST00000353855 AXDND1Q5T1B0 1012 aaPredicted RBP16.7■□□□□ 0.26
DNMT3B-204ENST00000353855 DNAI1Q9UI46 699 aa16.7■□□□□ 0.26
DNMT3B-204ENST00000353855 C10orf67Q8IYJ2 551 aa16.7■□□□□ 0.26
DNMT3B-204ENST00000353855 NEUROD6Q96NK8 337 aa16.7■□□□□ 0.26
DNMT3B-204ENST00000353855 IBTKQ9P2D0 1353 aaPredicted RBP16.7■□□□□ 0.26
DNMT3B-204ENST00000353855 TSR1Q2NL82 804 aaKnown RBP16.7■□□□□ 0.26
DNMT3B-204ENST00000353855 GPATCH11Q8N954 259 aa16.7■□□□□ 0.26
DNMT3B-204ENST00000353855 ANAPC15P60006 121 aa16.69■□□□□ 0.26
DNMT3B-204ENST00000353855 NME9Q86XW9 330 aa16.69■□□□□ 0.26
DNMT3B-204ENST00000353855 DEF6Q9H4E7 631 aa16.69■□□□□ 0.26
DNMT3B-204ENST00000353855 CCDC171Q6TFL3 1326 aa16.69■□□□□ 0.26
DNMT3B-204ENST00000353855 GABPB1Q06547 395 aaPredicted RBP16.69■□□□□ 0.26
DNMT3B-204ENST00000353855 ARHGAP29Q52LW3 1261 aa16.69■□□□□ 0.26
DNMT3B-204ENST00000353855 PBRM1Q86U86 1689 aa16.69■□□□□ 0.26
DNMT3B-204ENST00000353855 CCDC69A6NI79 296 aa16.69■□□□□ 0.26
DNMT3B-204ENST00000353855 NEMFO60524 1076 aa16.69■□□□□ 0.26
DNMT3B-204ENST00000353855 RPGRIP1LQ68CZ1 1315 aa16.68■□□□□ 0.26
DNMT3B-204ENST00000353855 CHMLP26374 656 aa16.68■□□□□ 0.26
DNMT3B-204ENST00000353855 PDLIM2Q96JY6 352 aa16.68■□□□□ 0.26
DNMT3B-204ENST00000353855 KIF1BPQ96EK5 621 aa16.68■□□□□ 0.26
DNMT3B-204ENST00000353855 PALD1Q9ULE6 856 aa16.68■□□□□ 0.26
DNMT3B-204ENST00000353855 NPC1L1Q9UHC9 1359 aa16.68■□□□□ 0.26
DNMT3B-204ENST00000353855 FAM193AP78312 1265 aa16.68■□□□□ 0.26
DNMT3B-204ENST00000353855 TRIM29Q14134 588 aa16.68■□□□□ 0.26
DNMT3B-204ENST00000353855 NOS1P29475 1434 aa16.68■□□□□ 0.26
DNMT3B-204ENST00000353855 CPLX2Q6PUV4 134 aaKnown RBP16.67■□□□□ 0.26
DNMT3B-204ENST00000353855 SYT10Q6XYQ8 523 aa16.67■□□□□ 0.26
DNMT3B-204ENST00000353855 GLRX3O76003 335 aaKnown RBP16.67■□□□□ 0.26
DNMT3B-204ENST00000353855 OSCARQ8IYS5 282 aa16.67■□□□□ 0.26
DNMT3B-204ENST00000353855 FSIP1Q8NA03 581 aa16.67■□□□□ 0.26
DNMT3B-204ENST00000353855 BOLA2Q9H3K6 86 aa16.67■□□□□ 0.26
DNMT3B-204ENST00000353855 PATL2C9JE40 543 aaKnown RBP16.66■□□□□ 0.26
DNMT3B-204ENST00000353855 NEXNQ0ZGT2 675 aa16.66■□□□□ 0.26
DNMT3B-204ENST00000353855 DUOX2Q9NRD8 1548 aa16.66■□□□□ 0.26
DNMT3B-204ENST00000353855 EIF3JO75822 258 aaKnown RBP16.66■□□□□ 0.26
DNMT3B-204ENST00000353855 STX1AQ16623 288 aa16.66■□□□□ 0.26
DNMT3B-204ENST00000353855 TAF7LQ5H9L4 462 aa16.66■□□□□ 0.26
DNMT3B-204ENST00000353855 USP16Q9Y5T5 823 aa16.66■□□□□ 0.26
DNMT3B-204ENST00000353855 TARBP1Q13395 1621 aaKnown RBP16.65■□□□□ 0.26
DNMT3B-204ENST00000353855 IBSPP21815 317 aaPredicted RBP16.65■□□□□ 0.26
DNMT3B-204ENST00000353855 CCAR1Q8IX12 1150 aaKnown RBP16.65■□□□□ 0.26
DNMT3B-204ENST00000353855 CHMP4CQ96CF2 233 aa16.65■□□□□ 0.26
DNMT3B-204ENST00000353855 TRAPPC8Q9Y2L5 1435 aa16.65■□□□□ 0.26
DNMT3B-204ENST00000353855 CCDC70Q6NSX1 233 aa16.65■□□□□ 0.26
DNMT3B-204ENST00000353855 WAPLQ7Z5K2 1190 aa16.65■□□□□ 0.26
DNMT3B-204ENST00000353855 HIP1O00291 1037 aa16.65■□□□□ 0.26
DNMT3B-204ENST00000353855 CYB5RLQ6IPT4 315 aa16.65■□□□□ 0.26
DNMT3B-204ENST00000353855 CCDC191Q8NCU4 936 aa16.65■□□□□ 0.26
DNMT3B-204ENST00000353855 SLC52A1Q9NWF4 448 aa16.65■□□□□ 0.26
DNMT3B-204ENST00000353855 ZNF215Q9UL58 517 aaPredicted RBP16.65■□□□□ 0.26
DNMT3B-204ENST00000353855 ZBTB22O15209 634 aa16.64■□□□□ 0.25
DNMT3B-204ENST00000353855 ERLIN1O75477 346 aa16.64■□□□□ 0.25
DNMT3B-204ENST00000353855 IPO7O95373 1038 aaKnown RBP16.64■□□□□ 0.25
DNMT3B-204ENST00000353855 AOPEPQ8N6M6 819 aa16.64■□□□□ 0.25
DNMT3B-204ENST00000353855 RUFY1Q96T51 708 aa16.64■□□□□ 0.25
DNMT3B-204ENST00000353855 CBX8Q9HC52 389 aa16.64■□□□□ 0.25
DNMT3B-204ENST00000353855 PLCH2O75038 1416 aa16.64■□□□□ 0.25
DNMT3B-204ENST00000353855 GSDMDP57764 484 aa16.64■□□□□ 0.25
DNMT3B-204ENST00000353855 FLIIQ13045 1269 aa16.64■□□□□ 0.25
DNMT3B-204ENST00000353855 MCM6Q14566 821 aa16.64■□□□□ 0.25
DNMT3B-204ENST00000353855 IRX3P78415 501 aaPredicted RBP16.64■□□□□ 0.25
DNMT3B-204ENST00000353855 HSP90AA4PQ58FG1 418 aa16.64■□□□□ 0.25
DNMT3B-204ENST00000353855 PCMTD1Q96MG8 357 aaPredicted RBP16.64■□□□□ 0.25
DNMT3B-204ENST00000353855 CCDC8Q9H0W5 538 aaPredicted RBP16.64■□□□□ 0.25
DNMT3B-204ENST00000353855 C14orf93Q9H972 538 aaKnown RBP16.64■□□□□ 0.25
DNMT3B-204ENST00000353855 ADGRL1O94910 1474 aa16.63■□□□□ 0.25
DNMT3B-204ENST00000353855 CCT2P78371 535 aaKnown RBP16.63■□□□□ 0.25
DNMT3B-204ENST00000353855 WASHC4Q2M389 1173 aa16.63■□□□□ 0.25
DNMT3B-204ENST00000353855 PPP1R42Q7Z4L9 355 aa16.63■□□□□ 0.25
DNMT3B-204ENST00000353855 TXNDC2Q86VQ3 553 aa16.63■□□□□ 0.25
DNMT3B-204ENST00000353855 CAGE1Q8TC20 777 aa16.63■□□□□ 0.25
DNMT3B-204ENST00000353855 KIF2CQ99661 725 aa16.63■□□□□ 0.25
DNMT3B-204ENST00000353855 HOOK1Q9UJC3 728 aaKnown RBP16.63■□□□□ 0.25
DNMT3B-204ENST00000353855 MBD5Q9P267 1494 aa16.63■□□□□ 0.25
DNMT3B-204ENST00000353855 GNG11P61952 73 aa16.63■□□□□ 0.25
DNMT3B-204ENST00000353855 RALYLQ86SE5 291 aaKnown RBP16.63■□□□□ 0.25
DNMT3B-204ENST00000353855 DHX37Q8IY37 1157 aaKnown RBP16.63■□□□□ 0.25
DNMT3B-204ENST00000353855 NRBP1Q9UHY1 535 aa16.63■□□□□ 0.25
DNMT3B-204ENST00000353855 IPO4Q8TEX9 1081 aaKnown RBP16.63■□□□□ 0.25
DNMT3B-204ENST00000353855 NAA30Q147X3 362 aaPredicted RBP16.62■□□□□ 0.25
DNMT3B-204ENST00000353855 NFXL1Q6ZNB6 911 aa16.62■□□□□ 0.25
DNMT3B-204ENST00000353855 KIAA1524Q8TCG1 905 aa16.62■□□□□ 0.25
DNMT3B-204ENST00000353855 ERCC4Q92889 916 aaPredicted RBP16.62■□□□□ 0.25
DNMT3B-204ENST00000353855 PTPRCP08575 1304 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms