RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 H2AFXP16104 143 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-203ENST00000349748 ATF7IPQ6VMQ6 1270 aa12.66□□□□□ -0.38
CAPN3-203ENST00000349748 RNF217Q8TC41 542 aa12.66□□□□□ -0.38
CAPN3-203ENST00000349748 SSH1Q8WYL5 1049 aa12.66□□□□□ -0.38
CAPN3-203ENST00000349748 FUCA2Q9BTY2 467 aa12.66□□□□□ -0.38
CAPN3-203ENST00000349748 TET3O43151 1660 aa12.66□□□□□ -0.38
CAPN3-203ENST00000349748 ANKRD65E5RJM6 399 aa12.66□□□□□ -0.38
CAPN3-203ENST00000349748 TDO2P48775 406 aa12.66□□□□□ -0.38
CAPN3-203ENST00000349748 CNPY2Q9Y2B0 182 aa12.66□□□□□ -0.38
CAPN3-203ENST00000349748 PTPRTO14522 1441 aa12.65□□□□□ -0.38
CAPN3-203ENST00000349748 HSP90B1P14625 803 aaKnown RBP12.65□□□□□ -0.38
CAPN3-203ENST00000349748 CACTINQ8WUQ7 758 aaKnown RBP12.65□□□□□ -0.38
CAPN3-203ENST00000349748 CARD14Q9BXL6 1004 aa12.65□□□□□ -0.38
CAPN3-203ENST00000349748 CWC15Q9P013 229 aaKnown RBP12.65□□□□□ -0.38
CAPN3-203ENST00000349748 CLTCL1P53675 1640 aa12.65□□□□□ -0.38
CAPN3-203ENST00000349748 SLU7O95391 586 aaKnown RBP12.65□□□□□ -0.38
CAPN3-203ENST00000349748 TRMT1Q9NXH9 659 aaKnown RBP12.65□□□□□ -0.38
CAPN3-203ENST00000349748 PLEKHG2Q9H7P9 1386 aa12.65□□□□□ -0.39
CAPN3-203ENST00000349748 GOLIM4O00461 696 aa12.64□□□□□ -0.39
CAPN3-203ENST00000349748 HTATSF1O43719 755 aaKnown RBP12.64□□□□□ -0.39
CAPN3-203ENST00000349748 TPM4P67936 248 aa12.64□□□□□ -0.39
CAPN3-203ENST00000349748 LUZP1Q86V48 1076 aa12.64□□□□□ -0.39
CAPN3-203ENST00000349748 FBXO18Q8NFZ0 1043 aa12.64□□□□□ -0.39
CAPN3-203ENST00000349748 NEK4P51957 841 aa12.64□□□□□ -0.39
CAPN3-203ENST00000349748 AGLP35573 1532 aa12.64□□□□□ -0.39
CAPN3-203ENST00000349748 PTPN14Q15678 1187 aa12.63□□□□□ -0.39
CAPN3-203ENST00000349748 TRPM2O94759 1503 aa12.63□□□□□ -0.39
CAPN3-203ENST00000349748 ADGRF5Q8IZF2 1346 aa12.63□□□□□ -0.39
CAPN3-203ENST00000349748 SEC31AO94979 1220 aaKnown RBP12.63□□□□□ -0.39
CAPN3-203ENST00000349748 OAS2P29728 719 aaKnown RBP12.63□□□□□ -0.39
CAPN3-203ENST00000349748 LMAN1P49257 510 aa12.63□□□□□ -0.39
CAPN3-203ENST00000349748 GPS2Q13227 327 aa12.63□□□□□ -0.39
CAPN3-203ENST00000349748 ARID5BQ14865 1188 aa12.63□□□□□ -0.39
CAPN3-203ENST00000349748 CCDC91Q7Z6B0 441 aa12.63□□□□□ -0.39
CAPN3-203ENST00000349748 WDR63Q8IWG1 891 aa12.63□□□□□ -0.39
CAPN3-203ENST00000349748 SGSM3Q96HU1 749 aa12.63□□□□□ -0.39
CAPN3-203ENST00000349748 RAD50Q92878 1312 aa12.63□□□□□ -0.39
CAPN3-203ENST00000349748 LMTK2Q8IWU2 1503 aa12.63□□□□□ -0.39
CAPN3-203ENST00000349748 EXOSC9Q06265 439 aaKnown RBP12.63□□□□□ -0.39
CAPN3-203ENST00000349748 SYTL4Q96C24 671 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-203ENST00000349748 CCDC189A1A4V9 331 aa12.62□□□□□ -0.39
CAPN3-203ENST00000349748 CCDC144BQ3MJ40 725 aa12.62□□□□□ -0.39
CAPN3-203ENST00000349748 ARHGAP29Q52LW3 1261 aa12.62□□□□□ -0.39
CAPN3-203ENST00000349748 FOXR1Q6PIV2 292 aa12.62□□□□□ -0.39
CAPN3-203ENST00000349748 REXO1L1PQ8IX06 675 aa12.62□□□□□ -0.39
CAPN3-203ENST00000349748 CCDC144CPQ8IYA2 1237 aa12.62□□□□□ -0.39
CAPN3-203ENST00000349748 GOLGA5Q8TBA6 731 aa12.62□□□□□ -0.39
CAPN3-203ENST00000349748 KDM4FA0A1W2PPD8 638 aa12.62□□□□□ -0.39
CAPN3-203ENST00000349748 MAGEA9P43362 315 aa12.62□□□□□ -0.39
CAPN3-203ENST00000349748 CFAP70Q5T0N1 1121 aa12.62□□□□□ -0.39
CAPN3-203ENST00000349748 KDM5AP29375 1690 aaKnown RBP12.62□□□□□ -0.39
CAPN3-203ENST00000349748 FIBPO43427 364 aa12.61□□□□□ -0.39
CAPN3-203ENST00000349748 GSCP56915 257 aaPredicted RBP12.61□□□□□ -0.39
CAPN3-203ENST00000349748 HSP90AB3PQ58FF7 597 aa12.61□□□□□ -0.39
CAPN3-203ENST00000349748 RUNDC1Q96C34 613 aa12.61□□□□□ -0.39
CAPN3-203ENST00000349748 CCDC34Q96HJ3 373 aa12.61□□□□□ -0.39
CAPN3-203ENST00000349748 ERVK-7P63135 1459 aa12.61□□□□□ -0.39
CAPN3-203ENST00000349748 ZRANB2O95218 330 aaKnown RBP eCLIP12.61□□□□□ -0.39
CAPN3-203ENST00000349748 NOM1Q5C9Z4 860 aaKnown RBP12.61□□□□□ -0.39
CAPN3-203ENST00000349748 TRIM5Q9C035 493 aa12.61□□□□□ -0.39
CAPN3-203ENST00000349748 SRCIN1Q9C0H9 1055 aa12.61□□□□□ -0.39
CAPN3-203ENST00000349748 NYAP1Q6ZVC0 841 aa12.6□□□□□ -0.39
CAPN3-203ENST00000349748 CLTCQ00610 1675 aaKnown RBP12.6□□□□□ -0.39
CAPN3-203ENST00000349748 NOS1P29475 1434 aa12.6□□□□□ -0.39
CAPN3-203ENST00000349748 PPIP5K1Q6PFW1 1433 aa12.6□□□□□ -0.39
CAPN3-203ENST00000349748 EIF3CLB5ME19 914 aaKnown RBP12.6□□□□□ -0.39
CAPN3-203ENST00000349748 EIF3CQ99613 913 aaKnown RBP12.6□□□□□ -0.39
CAPN3-203ENST00000349748 CAMSAP1Q5T5Y3 1602 aa12.6□□□□□ -0.39
CAPN3-203ENST00000349748 MAP2K2P36507 400 aa12.6□□□□□ -0.39
CAPN3-203ENST00000349748 TMCO3Q6UWJ1 677 aa12.6□□□□□ -0.39
CAPN3-203ENST00000349748 C16orf71Q8IYS4 520 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-203ENST00000349748 REREQ9P2R6 1566 aa12.59□□□□□ -0.39
CAPN3-203ENST00000349748 SASH3O75995 380 aa12.59□□□□□ -0.39
CAPN3-203ENST00000349748 TMEM132EQ6IEE7 984 aa12.59□□□□□ -0.39
CAPN3-203ENST00000349748 MED4Q9NPJ6 270 aa12.59□□□□□ -0.39
CAPN3-203ENST00000349748 UBE2HP62256 183 aa12.59□□□□□ -0.39
CAPN3-203ENST00000349748 CCDC27Q2M243 656 aa12.59□□□□□ -0.39
CAPN3-203ENST00000349748 MCTP2Q6DN12 878 aa12.59□□□□□ -0.39
CAPN3-203ENST00000349748 GCC1Q96CN9 775 aa12.59□□□□□ -0.39
CAPN3-203ENST00000349748 SEMA3FQ13275 785 aa12.58□□□□□ -0.4
CAPN3-203ENST00000349748 PPP2R5AQ15172 486 aa12.58□□□□□ -0.4
CAPN3-203ENST00000349748 INTS3Q68E01 1043 aaKnown RBP12.58□□□□□ -0.4
CAPN3-203ENST00000349748 TTLL5Q6EMB2 1281 aa12.58□□□□□ -0.4
CAPN3-203ENST00000349748 PLEKHM2Q8IWE5 1019 aa12.58□□□□□ -0.4
CAPN3-203ENST00000349748 CEP120Q8N960 986 aa12.58□□□□□ -0.4
CAPN3-203ENST00000349748 CLIP2Q9UDT6 1046 aa12.58□□□□□ -0.4
CAPN3-203ENST00000349748 CHMP3Q9Y3E7 222 aa12.58□□□□□ -0.4
CAPN3-203ENST00000349748 KIF1CO43896 1103 aaKnown RBP12.58□□□□□ -0.4
CAPN3-203ENST00000349748 CCDC192P0DO97 292 aa12.58□□□□□ -0.4
CAPN3-203ENST00000349748 ATP6V1AP38606 617 aa12.58□□□□□ -0.4
CAPN3-203ENST00000349748 ZNF75DP51815 510 aa12.58□□□□□ -0.4
CAPN3-203ENST00000349748 GORABQ5T7V8 394 aa12.58□□□□□ -0.4
CAPN3-203ENST00000349748 SIRT2Q8IXJ6 389 aa12.58□□□□□ -0.4
CAPN3-203ENST00000349748 ANKRD20A12PQ8NF67 263 aa12.58□□□□□ -0.4
CAPN3-203ENST00000349748 FAM200AQ8TCP9 573 aa12.58□□□□□ -0.4
CAPN3-203ENST00000349748 ACTN2P35609 894 aa12.57□□□□□ -0.4
CAPN3-203ENST00000349748 MAP2K1Q02750 393 aaPredicted RBP12.57□□□□□ -0.4
CAPN3-203ENST00000349748 SMC1AQ14683 1233 aaKnown RBP12.57□□□□□ -0.4
CAPN3-203ENST00000349748 RNF20Q5VTR2 975 aa12.57□□□□□ -0.4
CAPN3-203ENST00000349748 OTUD7AQ8TE49 926 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms