RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 PRAM1Q96QH2 718 aa14.41□□□□□ -0.1
CTNNB1-201ENST00000349496 TMEM63CQ9P1W3 806 aa14.41□□□□□ -0.1
CTNNB1-201ENST00000349496 DHX8Q14562 1220 aaKnown RBP14.41□□□□□ -0.1
CTNNB1-201ENST00000349496 JAKMIP3Q5VZ66 844 aa14.41□□□□□ -0.1
CTNNB1-201ENST00000349496 GOPCQ9HD26 462 aa14.41□□□□□ -0.1
CTNNB1-201ENST00000349496 ZRANB1Q9UGI0 708 aa14.41□□□□□ -0.1
CTNNB1-201ENST00000349496 ZNF215Q9UL58 517 aaPredicted RBP14.41□□□□□ -0.1
CTNNB1-201ENST00000349496 MUM1L1Q5H9M0 696 aa14.41□□□□□ -0.1
CTNNB1-201ENST00000349496 ITFG2Q969R8 447 aa14.41□□□□□ -0.1
CTNNB1-201ENST00000349496 CCDC34Q96HJ3 373 aa14.41□□□□□ -0.1
CTNNB1-201ENST00000349496 ZNF446Q9NWS9 450 aa14.41□□□□□ -0.1
CTNNB1-201ENST00000349496 CGNL1Q0VF96 1302 aa14.41□□□□□ -0.1
CTNNB1-201ENST00000349496 ASXL1Q8IXJ9 1541 aa14.41□□□□□ -0.1
CTNNB1-201ENST00000349496 SHROOM2Q13796 1616 aa14.41□□□□□ -0.1
CTNNB1-201ENST00000349496 PDE6BP35913 854 aa14.4□□□□□ -0.1
CTNNB1-201ENST00000349496 TRDNQ13061 729 aa14.4□□□□□ -0.1
CTNNB1-201ENST00000349496 GOLGA5Q8TBA6 731 aa14.4□□□□□ -0.1
CTNNB1-201ENST00000349496 PUS7Q96PZ0 661 aaKnown RBP14.4□□□□□ -0.1
CTNNB1-201ENST00000349496 EIF3AQ14152 1382 aaKnown RBP14.4□□□□□ -0.1
CTNNB1-201ENST00000349496 NUTM2GQ5VZR2 741 aa14.4□□□□□ -0.1
CTNNB1-201ENST00000349496 SMARCE1Q969G3 411 aa14.4□□□□□ -0.1
CTNNB1-201ENST00000349496 PCDHB15Q9Y5E8 787 aa14.4□□□□□ -0.1
CTNNB1-201ENST00000349496 PLXNC1O60486 1568 aa14.4□□□□□ -0.1
CTNNB1-201ENST00000349496 NPATQ14207 1427 aa14.4□□□□□ -0.1
CTNNB1-201ENST00000349496 CD109Q6YHK3 1445 aa14.4□□□□□ -0.1
CTNNB1-201ENST00000349496 CEP135Q66GS9 1140 aa14.4□□□□□ -0.1
CTNNB1-201ENST00000349496 ZMYM4Q5VZL5 1548 aa14.39□□□□□ -0.11
CTNNB1-201ENST00000349496 PTPRTO14522 1441 aa14.39□□□□□ -0.11
CTNNB1-201ENST00000349496 HMOX1P09601 288 aa14.39□□□□□ -0.11
CTNNB1-201ENST00000349496 PEX19P40855 299 aa14.39□□□□□ -0.11
CTNNB1-201ENST00000349496 EIF3CLB5ME19 914 aaKnown RBP14.39□□□□□ -0.11
CTNNB1-201ENST00000349496 HCLS1P14317 486 aaPredicted RBP14.39□□□□□ -0.11
CTNNB1-201ENST00000349496 EIF3CQ99613 913 aaKnown RBP14.39□□□□□ -0.11
CTNNB1-201ENST00000349496 ST5P78524 1137 aa14.39□□□□□ -0.11
CTNNB1-201ENST00000349496 SF3A1Q15459 793 aaKnown RBP14.39□□□□□ -0.11
CTNNB1-201ENST00000349496 C14orf93Q9H972 538 aaKnown RBP14.39□□□□□ -0.11
CTNNB1-201ENST00000349496 LMBRD1Q9NUN5 540 aa14.39□□□□□ -0.11
CTNNB1-201ENST00000349496 CCDC189A1A4V9 331 aa14.38□□□□□ -0.11
CTNNB1-201ENST00000349496 GCKP35557 465 aa14.38□□□□□ -0.11
CTNNB1-201ENST00000349496 CCT2P78371 535 aaKnown RBP14.38□□□□□ -0.11
CTNNB1-201ENST00000349496 FBXO18Q8NFZ0 1043 aa14.38□□□□□ -0.11
CTNNB1-201ENST00000349496 KIAA1524Q8TCG1 905 aa14.38□□□□□ -0.11
CTNNB1-201ENST00000349496 JPH2Q9BR39 696 aaPredicted RBP14.38□□□□□ -0.11
CTNNB1-201ENST00000349496 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
CTNNB1-201ENST00000349496 SPATS2LQ9NUQ6 558 aaKnown RBP14.38□□□□□ -0.11
CTNNB1-201ENST00000349496 SPTLC3Q9NUV7 552 aa14.38□□□□□ -0.11
CTNNB1-201ENST00000349496 RPUSD2Q8IZ73 545 aaKnown RBP14.37□□□□□ -0.11
CTNNB1-201ENST00000349496 GAS2L2Q8NHY3 880 aa14.37□□□□□ -0.11
CTNNB1-201ENST00000349496 ZCCHC17Q9NP64 241 aaKnown RBP14.37□□□□□ -0.11
CTNNB1-201ENST00000349496 KIF2AO00139 706 aaPredicted RBP14.37□□□□□ -0.11
CTNNB1-201ENST00000349496 SYCP1Q15431 976 aa14.37□□□□□ -0.11
CTNNB1-201ENST00000349496 VEZTQ9HBM0 779 aa14.37□□□□□ -0.11
CTNNB1-201ENST00000349496 TRPM2O94759 1503 aa14.37□□□□□ -0.11
CTNNB1-201ENST00000349496 CTAGE5O15320 804 aa14.37□□□□□ -0.11
CTNNB1-201ENST00000349496 SETSIPP0DME0 302 aa14.37□□□□□ -0.11
CTNNB1-201ENST00000349496 CABP1Q9NZU7 370 aa14.37□□□□□ -0.11
CTNNB1-201ENST00000349496 FRMD3A2A2Y4 597 aa14.36□□□□□ -0.11
CTNNB1-201ENST00000349496 OAS2P29728 719 aaKnown RBP14.36□□□□□ -0.11
CTNNB1-201ENST00000349496 PTPN14Q15678 1187 aa14.36□□□□□ -0.11
CTNNB1-201ENST00000349496 ARMC3Q5W041 872 aa14.36□□□□□ -0.11
CTNNB1-201ENST00000349496 MRFAP1L1Q96HT8 127 aa14.36□□□□□ -0.11
CTNNB1-201ENST00000349496 SRRTQ9BXP5 876 aaKnown RBP14.36□□□□□ -0.11
CTNNB1-201ENST00000349496 TMCO5BA8MYB1 307 aa14.36□□□□□ -0.11
CTNNB1-201ENST00000349496 RNF20Q5VTR2 975 aa14.36□□□□□ -0.11
CTNNB1-201ENST00000349496 UBXN4Q92575 508 aa14.36□□□□□ -0.11
CTNNB1-201ENST00000349496 TPD52L2O43399 206 aaKnown RBP14.35□□□□□ -0.11
CTNNB1-201ENST00000349496 RARSP54136 660 aaKnown RBP14.35□□□□□ -0.11
CTNNB1-201ENST00000349496 EXOSC9Q06265 439 aaKnown RBP14.35□□□□□ -0.11
CTNNB1-201ENST00000349496 RBBP5Q15291 538 aaKnown RBP14.35□□□□□ -0.11
CTNNB1-201ENST00000349496 TRIM6Q9C030 488 aaPredicted RBP14.35□□□□□ -0.11
CTNNB1-201ENST00000349496 CENPHQ9H3R5 247 aa14.35□□□□□ -0.11
CTNNB1-201ENST00000349496 CLASP1Q7Z460 1538 aa14.35□□□□□ -0.11
CTNNB1-201ENST00000349496 PES1O00541 588 aaKnown RBP14.35□□□□□ -0.11
CTNNB1-201ENST00000349496 PTGS1P23219 599 aa14.35□□□□□ -0.11
CTNNB1-201ENST00000349496 RBM6P78332 1123 aaKnown RBP14.35□□□□□ -0.11
CTNNB1-201ENST00000349496 IRX1P78414 480 aaPredicted RBP14.35□□□□□ -0.11
CTNNB1-201ENST00000349496 MAP9Q49MG5 647 aa14.35□□□□□ -0.11
CTNNB1-201ENST00000349496 CCAR2Q8N163 923 aaKnown RBP14.35□□□□□ -0.11
CTNNB1-201ENST00000349496 ERCC4Q92889 916 aaPredicted RBP14.35□□□□□ -0.11
CTNNB1-201ENST00000349496 BSDC1Q9NW68 430 aaPredicted RBP14.35□□□□□ -0.11
CTNNB1-201ENST00000349496 G3BP2Q9UN86 482 aaKnown RBP14.35□□□□□ -0.11
CTNNB1-201ENST00000349496 N4BP2L2Q92802 583 aaPredicted RBP14.35□□□□□ -0.11
CTNNB1-201ENST00000349496 WDR63Q8IWG1 891 aa14.34□□□□□ -0.11
CTNNB1-201ENST00000349496 ACRBPQ8NEB7 543 aa14.34□□□□□ -0.11
CTNNB1-201ENST00000349496 GPT2Q8TD30 523 aa14.34□□□□□ -0.11
CTNNB1-201ENST00000349496 RUNDC1Q96C34 613 aa14.34□□□□□ -0.11
CTNNB1-201ENST00000349496 FAM210AQ96ND0 272 aa14.34□□□□□ -0.11
CTNNB1-201ENST00000349496 CEP89Q96ST8 783 aa14.34□□□□□ -0.11
CTNNB1-201ENST00000349496 TRMT1Q9NXH9 659 aaKnown RBP14.34□□□□□ -0.11
CTNNB1-201ENST00000349496 SLU7O95391 586 aaKnown RBP14.33□□□□□ -0.11
CTNNB1-201ENST00000349496 WWC2Q6AWC2 1192 aa14.33□□□□□ -0.11
CTNNB1-201ENST00000349496 CWC27Q6UX04 472 aaKnown RBP14.33□□□□□ -0.11
CTNNB1-201ENST00000349496 RBM42Q9BTD8 480 aaKnown RBP14.33□□□□□ -0.11
CTNNB1-201ENST00000349496 YEATS2Q9ULM3 1422 aa14.33□□□□□ -0.12
CTNNB1-201ENST00000349496 ARHGAP29Q52LW3 1261 aa14.33□□□□□ -0.12
CTNNB1-201ENST00000349496 ANKRD18AQ8IVF6 992 aa14.33□□□□□ -0.12
CTNNB1-201ENST00000349496 TRMT2AQ8IZ69 625 aaKnown RBP14.33□□□□□ -0.12
CTNNB1-201ENST00000349496 EIF2AK4Q9P2K8 1649 aaKnown RBP14.33□□□□□ -0.12
CTNNB1-201ENST00000349496 PAX7P23759 505 aa14.33□□□□□ -0.12
CTNNB1-201ENST00000349496 UVSSAQ2YD98 709 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms