RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 HYPKQ9NX55 129 aa25.17■■□□□ 1.62
CHRNA3-202ENST00000348639 SDSP20132 328 aa25.16■■□□□ 1.62
CHRNA3-202ENST00000348639 PDE1AP54750 535 aa25.15■■□□□ 1.62
CHRNA3-202ENST00000348639 TOM1L2Q6ZVM7 507 aa25.15■■□□□ 1.62
CHRNA3-202ENST00000348639 ANTXR1Q9H6X2 564 aa25.15■■□□□ 1.62
CHRNA3-202ENST00000348639 CYP27B1O15528 508 aa25.15■■□□□ 1.62
CHRNA3-202ENST00000348639 PROSER3Q2NL68 480 aa25.15■■□□□ 1.62
CHRNA3-202ENST00000348639 DCAF5Q96JK2 942 aa25.15■■□□□ 1.62
CHRNA3-202ENST00000348639 SALL3Q9BXA9 1300 aa25.14■■□□□ 1.62
CHRNA3-202ENST00000348639 KSR2Q6VAB6 950 aa25.14■■□□□ 1.62
CHRNA3-202ENST00000348639 PKD1L3Q7Z443 1732 aa25.14■■□□□ 1.62
CHRNA3-202ENST00000348639 NBPF7P0C2Y1 421 aaPredicted RBP25.13■■□□□ 1.61
CHRNA3-202ENST00000348639 SNX21Q969T3 373 aa25.13■■□□□ 1.61
CHRNA3-202ENST00000348639 DDX21Q9NR30 783 aaKnown RBP eCLIP25.13■■□□□ 1.61
CHRNA3-202ENST00000348639 POLA2Q14181 598 aa25.13■■□□□ 1.61
CHRNA3-202ENST00000348639 SLKQ9H2G2 1235 aaPredicted RBP25.13■■□□□ 1.61
CHRNA3-202ENST00000348639 MRC1P22897 1456 aa25.13■■□□□ 1.61
CHRNA3-202ENST00000348639 WDR17Q8IZU2 1322 aa25.13■■□□□ 1.61
CHRNA3-202ENST00000348639 ALDH1L1O75891 902 aa25.12■■□□□ 1.61
CHRNA3-202ENST00000348639 HSP90AB1P08238 724 aaKnown RBP25.12■■□□□ 1.61
CHRNA3-202ENST00000348639 KIF2CQ99661 725 aa25.12■■□□□ 1.61
CHRNA3-202ENST00000348639 MAP3K2Q9Y2U5 619 aa25.12■■□□□ 1.61
CHRNA3-202ENST00000348639 CASC1Q6TDU7 716 aa25.12■■□□□ 1.61
CHRNA3-202ENST00000348639 PPP1R42Q7Z4L9 355 aa25.12■■□□□ 1.61
CHRNA3-202ENST00000348639 HSCBQ8IWL3 235 aa25.12■■□□□ 1.61
CHRNA3-202ENST00000348639 RAB11FIP3O75154 756 aa25.1■■□□□ 1.61
CHRNA3-202ENST00000348639 DEKP35659 375 aaKnown RBP25.1■■□□□ 1.61
CHRNA3-202ENST00000348639 PDIA6Q15084 440 aa25.1■■□□□ 1.61
CHRNA3-202ENST00000348639 STRN4Q9NRL3 753 aa25.09■■□□□ 1.61
CHRNA3-202ENST00000348639 DDX58O95786 925 aaKnown RBP25.08■■□□□ 1.61
CHRNA3-202ENST00000348639 COL5A2P05997 1499 aaPredicted RBP25.08■■□□□ 1.61
CHRNA3-202ENST00000348639 MX1P20591 662 aa25.08■■□□□ 1.61
CHRNA3-202ENST00000348639 STAP2Q9UGK3 403 aa25.08■■□□□ 1.61
CHRNA3-202ENST00000348639 SRGAP3O43295 1099 aa25.07■■□□□ 1.6
CHRNA3-202ENST00000348639 TTC5Q8N0Z6 440 aa25.07■■□□□ 1.6
CHRNA3-202ENST00000348639 CABP4P57796 275 aa25.07■■□□□ 1.6
CHRNA3-202ENST00000348639 ZNF496Q96IT1 587 aaPredicted RBP25.07■■□□□ 1.6
CHRNA3-202ENST00000348639 HDAC5Q9UQL6 1122 aa25.07■■□□□ 1.6
CHRNA3-202ENST00000348639 EVA1CP58658 441 aa25.06■■□□□ 1.6
CHRNA3-202ENST00000348639 AIMP1Q12904 312 aaKnown RBP25.06■■□□□ 1.6
CHRNA3-202ENST00000348639 SURF6O75683 361 aaKnown RBP25.05■■□□□ 1.6
CHRNA3-202ENST00000348639 MTX1Q13505 466 aa25.05■■□□□ 1.6
CHRNA3-202ENST00000348639 LINS1Q8NG48 757 aa25.05■■□□□ 1.6
CHRNA3-202ENST00000348639 USP26Q9BXU7 913 aa25.05■■□□□ 1.6
CHRNA3-202ENST00000348639 C5P01031 1676 aa25.05■■□□□ 1.6
CHRNA3-202ENST00000348639 FRAT2O75474 233 aaPredicted RBP25.05■■□□□ 1.6
CHRNA3-202ENST00000348639 ZCRB1Q8TBF4 217 aaKnown RBP25.05■■□□□ 1.6
CHRNA3-202ENST00000348639 ABCA3Q99758 1704 aa25.05■■□□□ 1.6
CHRNA3-202ENST00000348639 C9orf78Q9NZ63 289 aaPredicted RBP25.05■■□□□ 1.6
CHRNA3-202ENST00000348639 AOX1Q06278 1338 aa25.04■■□□□ 1.6
CHRNA3-202ENST00000348639 SNRPA1P09661 255 aaKnown RBP25.04■■□□□ 1.6
CHRNA3-202ENST00000348639 NHSL1Q5SYE7 1610 aa25.04■■□□□ 1.6
CHRNA3-202ENST00000348639 MYL6BP14649 208 aa25.03■■□□□ 1.6
CHRNA3-202ENST00000348639 PARP4Q9UKK3 1724 aaKnown RBP25.03■■□□□ 1.6
CHRNA3-202ENST00000348639 PCDH11XQ9BZA7 1347 aa25.03■■□□□ 1.6
CHRNA3-202ENST00000348639 PCDH11YQ9BZA8 1340 aa25.03■■□□□ 1.6
CHRNA3-202ENST00000348639 HSP90AB4PQ58FF6 505 aa25.03■■□□□ 1.6
CHRNA3-202ENST00000348639 LARP1Q6PKG0 1096 aaKnown RBP25.03■■□□□ 1.6
CHRNA3-202ENST00000348639 FMNL2Q96PY5 1086 aa25.03■■□□□ 1.6
CHRNA3-202ENST00000348639 CWF19L2Q2TBE0 894 aaKnown RBP25.02■■□□□ 1.6
CHRNA3-202ENST00000348639 RHPN1Q8TCX5 695 aa25.02■■□□□ 1.6
CHRNA3-202ENST00000348639 KIF1BPQ96EK5 621 aa25.02■■□□□ 1.6
CHRNA3-202ENST00000348639 UTYO14607 1347 aa25.02■■□□□ 1.6
CHRNA3-202ENST00000348639 REC8O95072 547 aa25.02■■□□□ 1.6
CHRNA3-202ENST00000348639 IL2RBP14784 551 aa25.02■■□□□ 1.6
CHRNA3-202ENST00000348639 TSHZ3Q63HK5 1081 aa25.02■■□□□ 1.6
CHRNA3-202ENST00000348639 SPRYD3Q8NCJ5 442 aa25.02■■□□□ 1.6
CHRNA3-202ENST00000348639 CARD10Q9BWT7 1032 aa25.02■■□□□ 1.6
CHRNA3-202ENST00000348639 TUBGCP6Q96RT7 1819 aa25.01■■□□□ 1.59
CHRNA3-202ENST00000348639 ERC2O15083 957 aa25■■□□□ 1.59
CHRNA3-202ENST00000348639 IL1RAPL2Q9NP60 686 aa25■■□□□ 1.59
CHRNA3-202ENST00000348639 RIC3Q7Z5B4 369 aa25■■□□□ 1.59
CHRNA3-202ENST00000348639 USP16Q9Y5T5 823 aa25■■□□□ 1.59
CHRNA3-202ENST00000348639 LTBP4Q8N2S1 1624 aa24.99■■□□□ 1.59
CHRNA3-202ENST00000348639 GRM8O00222 908 aa24.99■■□□□ 1.59
CHRNA3-202ENST00000348639 DDX54Q8TDD1 881 aaKnown RBP24.99■■□□□ 1.59
CHRNA3-202ENST00000348639 XAGE3Q8WTP9 111 aa24.98■■□□□ 1.59
CHRNA3-202ENST00000348639 CHMP5Q9NZZ3 219 aa24.98■■□□□ 1.59
CHRNA3-202ENST00000348639 LRP10Q7Z4F1 713 aa24.98■■□□□ 1.59
CHRNA3-202ENST00000348639 RABEP1Q15276 862 aa24.97■■□□□ 1.59
CHRNA3-202ENST00000348639 COPS6Q7L5N1 327 aa24.97■■□□□ 1.59
CHRNA3-202ENST00000348639 RBM42Q9BTD8 480 aaKnown RBP24.97■■□□□ 1.59
CHRNA3-202ENST00000348639 PIP4K2AP48426 406 aaPredicted RBP24.96■■□□□ 1.59
CHRNA3-202ENST00000348639 IGKV5-2P06315 115 aa24.96■■□□□ 1.59
CHRNA3-202ENST00000348639 NEXNQ0ZGT2 675 aa24.96■■□□□ 1.59
CHRNA3-202ENST00000348639 ERVV-2B6SEH9 535 aa24.95■■□□□ 1.58
CHRNA3-202ENST00000348639 CD2BP2O95400 341 aaKnown RBP24.95■■□□□ 1.58
CHRNA3-202ENST00000348639 NKX1-1Q15270 411 aaPredicted RBP24.95■■□□□ 1.58
CHRNA3-202ENST00000348639 NUTM1Q86Y26 1132 aa24.95■■□□□ 1.58
CHRNA3-202ENST00000348639 K7ELQ4 463 aaPredicted RBP24.95■■□□□ 1.58
CHRNA3-202ENST00000348639 METTL22Q9BUU2 404 aaPredicted RBP24.95■■□□□ 1.58
CHRNA3-202ENST00000348639 TRIM6-TRIM34B2RNG4 842 aa24.94■■□□□ 1.58
CHRNA3-202ENST00000348639 DDIT3P35638 169 aa24.94■■□□□ 1.58
CHRNA3-202ENST00000348639 BTG4Q9NY30 223 aa24.94■■□□□ 1.58
CHRNA3-202ENST00000348639 NEURL1BA8MQ27 555 aa24.93■■□□□ 1.58
CHRNA3-202ENST00000348639 ANKRD13DQ6ZTN6 518 aa24.93■■□□□ 1.58
CHRNA3-202ENST00000348639 RILPL2Q969X0 211 aa24.93■■□□□ 1.58
CHRNA3-202ENST00000348639 SUCLG2Q96I99 432 aa24.93■■□□□ 1.58
CHRNA3-202ENST00000348639 ESYT1Q9BSJ8 1104 aa24.93■■□□□ 1.58
CHRNA3-202ENST00000348639 GLI3P10071 1580 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms