RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 CHPF2Q9P2E5 772 aa34.67■■■■□ 3.14
SSBP4-202ENST00000348495 PLIN1O60240 522 aa34.66■■■■□ 3.14
SSBP4-202ENST00000348495 DBF4Q9UBU7 674 aaPredicted RBP34.65■■■■□ 3.14
SSBP4-202ENST00000348495 PDIA6Q15084 440 aa34.64■■■■□ 3.14
SSBP4-202ENST00000348495 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.64■■■■□ 3.14
SSBP4-202ENST00000348495 NOB1Q9ULX3 412 aaKnown RBP34.64■■■■□ 3.14
SSBP4-202ENST00000348495 ERBB4Q15303 1308 aa34.63■■■■□ 3.13
SSBP4-202ENST00000348495 FRAT1Q92837 279 aaPredicted RBP34.63■■■■□ 3.13
SSBP4-202ENST00000348495 ATP6V1AP38606 617 aa34.62■■■■□ 3.13
SSBP4-202ENST00000348495 DDX21Q9NR30 783 aaKnown RBP eCLIP34.62■■■■□ 3.13
SSBP4-202ENST00000348495 ITPK1Q13572 414 aa34.61■■■■□ 3.13
SSBP4-202ENST00000348495 PROSER3Q2NL68 480 aa34.61■■■■□ 3.13
SSBP4-202ENST00000348495 STARD3NLO95772 234 aa34.61■■■■□ 3.13
SSBP4-202ENST00000348495 CYP19A1P11511 503 aaPredicted RBP34.61■■■■□ 3.13
SSBP4-202ENST00000348495 G2E3Q7L622 706 aa34.61■■■■□ 3.13
SSBP4-202ENST00000348495 ARHGAP45Q92619 1136 aa34.61■■■■□ 3.13
SSBP4-202ENST00000348495 ZKSCAN2Q63HK3 967 aa34.6■■■■□ 3.13
SSBP4-202ENST00000348495 TNS1Q9HBL0 1735 aaKnown RBP34.6■■■■□ 3.13
SSBP4-202ENST00000348495 IPO8O15397 1037 aaKnown RBP34.58■■■■□ 3.13
SSBP4-202ENST00000348495 LRP10Q7Z4F1 713 aa34.58■■■■□ 3.13
SSBP4-202ENST00000348495 COL5A3P25940 1745 aaPredicted RBP34.58■■■■□ 3.13
SSBP4-202ENST00000348495 NBPF26B4DH59 902 aa34.58■■■■□ 3.13
SSBP4-202ENST00000348495 ANXA1P04083 346 aa34.58■■■■□ 3.13
SSBP4-202ENST00000348495 NBPF14Q5TI25 921 aa34.58■■■■□ 3.13
SSBP4-202ENST00000348495 NBPF10Q6P3W6 841 aaKnown RBP34.58■■■■□ 3.13
SSBP4-202ENST00000348495 NBPF15Q8N660 670 aa34.58■■■■□ 3.13
SSBP4-202ENST00000348495 ATF7IPQ6VMQ6 1270 aa34.57■■■■□ 3.12
SSBP4-202ENST00000348495 HYPKQ9NX55 129 aa34.57■■■■□ 3.12
SSBP4-202ENST00000348495 PTPRCP08575 1304 aa34.57■■■■□ 3.12
SSBP4-202ENST00000348495 A1BGP04217 495 aa34.56■■■■□ 3.12
SSBP4-202ENST00000348495 TRIM27P14373 513 aa34.56■■■■□ 3.12
SSBP4-202ENST00000348495 CANXP27824 592 aaKnown RBP34.56■■■■□ 3.12
SSBP4-202ENST00000348495 FLIIQ13045 1269 aa34.56■■■■□ 3.12
SSBP4-202ENST00000348495 PHAXQ9H814 394 aaKnown RBP34.55■■■■□ 3.12
SSBP4-202ENST00000348495 C20orf194Q5TEA3 1177 aa34.55■■■■□ 3.12
SSBP4-202ENST00000348495 TNNQ9UQP3 1299 aa34.54■■■■□ 3.12
SSBP4-202ENST00000348495 RREB1Q92766 1687 aa34.54■■■■□ 3.12
SSBP4-202ENST00000348495 PDE3AQ14432 1141 aa34.53■■■■□ 3.12
SSBP4-202ENST00000348495 CCNL1Q9UK58 526 aaPredicted RBP34.53■■■■□ 3.12
SSBP4-202ENST00000348495 PIP4K2AP48426 406 aaPredicted RBP34.52■■■■□ 3.12
SSBP4-202ENST00000348495 PLSCR1O15162 318 aa34.52■■■■□ 3.12
SSBP4-202ENST00000348495 MYL6BP14649 208 aa34.51■■■■□ 3.12
SSBP4-202ENST00000348495 KCNQ4P56696 695 aa34.51■■■■□ 3.12
SSBP4-202ENST00000348495 API5Q9BZZ5 524 aaKnown RBP34.51■■■■□ 3.12
SSBP4-202ENST00000348495 LINC00116Q8NCU8 138 aa34.5■■■■□ 3.11
SSBP4-202ENST00000348495 APBA3O96018 575 aa34.5■■■■□ 3.11
SSBP4-202ENST00000348495 INTS5Q6P9B9 1019 aaKnown RBP34.5■■■■□ 3.11
SSBP4-202ENST00000348495 TAF1LQ8IZX4 1826 aa34.49■■■■□ 3.11
SSBP4-202ENST00000348495 RLBP1P12271 317 aa34.49■■■■□ 3.11
SSBP4-202ENST00000348495 MYH14Q7Z406 1995 aaKnown RBP34.48■■■■□ 3.11
SSBP4-202ENST00000348495 RGPD3A6NKT7 1758 aaPredicted RBP34.48■■■■□ 3.11
SSBP4-202ENST00000348495 RGPD4Q7Z3J3 1758 aa34.48■■■■□ 3.11
SSBP4-202ENST00000348495 CRKLP46109 303 aaKnown RBP34.48■■■■□ 3.11
SSBP4-202ENST00000348495 IRX6P78412 446 aaPredicted RBP34.48■■■■□ 3.11
SSBP4-202ENST00000348495 SLC27A3Q5K4L6 730 aa34.48■■■■□ 3.11
SSBP4-202ENST00000348495 ZBTB1Q9Y2K1 713 aa34.48■■■■□ 3.11
SSBP4-202ENST00000348495 FKBP5Q13451 457 aaPredicted RBP34.47■■■■□ 3.11
SSBP4-202ENST00000348495 DZIP1LQ8IYY4 767 aaKnown RBP34.47■■■■□ 3.11
SSBP4-202ENST00000348495 LRRC4BQ9NT99 713 aa34.47■■■■□ 3.11
SSBP4-202ENST00000348495 CCDC87Q9NVE4 849 aa34.47■■■■□ 3.11
SSBP4-202ENST00000348495 ABCC4O15439 1325 aa34.47■■■■□ 3.11
SSBP4-202ENST00000348495 MS4A1P11836 297 aa34.47■■■■□ 3.11
SSBP4-202ENST00000348495 PROM2Q8N271 834 aa34.47■■■■□ 3.11
SSBP4-202ENST00000348495 PANK1Q8TE04 598 aa34.47■■■■□ 3.11
SSBP4-202ENST00000348495 CLUAP1Q96AJ1 413 aa34.47■■■■□ 3.11
SSBP4-202ENST00000348495 CNTNAP4Q9C0A0 1308 aa34.46■■■■□ 3.11
SSBP4-202ENST00000348495 NEFLP07196 543 aa34.46■■■■□ 3.11
SSBP4-202ENST00000348495 XAGE3Q8WTP9 111 aa34.45■■■■□ 3.11
SSBP4-202ENST00000348495 COPS6Q7L5N1 327 aa34.44■■■■□ 3.1
SSBP4-202ENST00000348495 TXNRD1Q16881 649 aa34.44■■■■□ 3.1
SSBP4-202ENST00000348495 RC3H1Q5TC82 1133 aaKnown RBP34.44■■■■□ 3.1
SSBP4-202ENST00000348495 FTSJ3Q8IY81 847 aaKnown RBP34.43■■■■□ 3.1
SSBP4-202ENST00000348495 ADCY9O60503 1353 aa34.43■■■■□ 3.1
SSBP4-202ENST00000348495 IL6STP40189 918 aaPredicted RBP34.42■■■■□ 3.1
SSBP4-202ENST00000348495 C4BP0C0L5 1744 aa34.41■■■■□ 3.1
SSBP4-202ENST00000348495 F6X3S4 739 aa34.41■■■■□ 3.1
SSBP4-202ENST00000348495 AIMP1Q12904 312 aaKnown RBP34.41■■■■□ 3.1
SSBP4-202ENST00000348495 EIF5P55010 431 aaKnown RBP34.4■■■■□ 3.1
SSBP4-202ENST00000348495 PI4KAP2A4QPH2 592 aa34.39■■■■□ 3.1
SSBP4-202ENST00000348495 KSR2Q6VAB6 950 aa34.39■■■■□ 3.1
SSBP4-202ENST00000348495 PI4KAP1Q8N8J0 262 aa34.39■■■■□ 3.1
SSBP4-202ENST00000348495 DDX58O95786 925 aaKnown RBP34.38■■■■□ 3.09
SSBP4-202ENST00000348495 FKBP8Q14318 412 aa34.38■■■■□ 3.09
SSBP4-202ENST00000348495 TMEM57Q8N5G2 664 aa34.38■■■■□ 3.09
SSBP4-202ENST00000348495 CRBNQ96SW2 442 aa34.38■■■■□ 3.09
SSBP4-202ENST00000348495 PXDNLA1KZ92 1463 aa34.37■■■■□ 3.09
SSBP4-202ENST00000348495 TTLL7Q6ZT98 887 aa34.37■■■■□ 3.09
SSBP4-202ENST00000348495 ANKRD13DQ6ZTN6 518 aa34.36■■■■□ 3.09
SSBP4-202ENST00000348495 COG6Q9Y2V7 657 aa34.36■■■■□ 3.09
SSBP4-202ENST00000348495 INTS3Q68E01 1043 aaKnown RBP34.35■■■■□ 3.09
SSBP4-202ENST00000348495 N4BP2Q86UW6 1770 aaPredicted RBP34.35■■■■□ 3.09
SSBP4-202ENST00000348495 HMGB2P26583 209 aaKnown RBP34.35■■■■□ 3.09
SSBP4-202ENST00000348495 MVPQ14764 893 aaKnown RBP34.35■■■■□ 3.09
SSBP4-202ENST00000348495 DNAAF4Q8WXU2 420 aa34.35■■■■□ 3.09
SSBP4-202ENST00000348495 MAP3K2Q9Y2U5 619 aa34.35■■■■□ 3.09
SSBP4-202ENST00000348495 PLBD2Q8NHP8 589 aa34.34■■■■□ 3.09
SSBP4-202ENST00000348495 CAMKK2Q96RR4 588 aa34.34■■■■□ 3.09
SSBP4-202ENST00000348495 NUP188Q5SRE5 1749 aa34.34■■■■□ 3.09
SSBP4-202ENST00000348495 ZNF330Q9Y3S2 320 aaPredicted RBP34.33■■■■□ 3.09
SSBP4-202ENST00000348495 ARFGEF2Q9Y6D5 1785 aa34.32■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms