RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 AEBP1Q8IUX7 1158 aa13.19□□□□□ -0.3
MRPL55-204ENST00000348259 FER1L6Q2WGJ9 1857 aa13.19□□□□□ -0.3
MRPL55-204ENST00000348259 SOS1Q07889 1333 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-204ENST00000348259 KDM2BQ8NHM5 1336 aa13.18□□□□□ -0.3
MRPL55-204ENST00000348259 RNF181Q9P0P0 153 aa13.18□□□□□ -0.3
MRPL55-204ENST00000348259 COL11A2P13942 1736 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-204ENST00000348259 CABP4P57796 275 aa13.17□□□□□ -0.3
MRPL55-204ENST00000348259 NFATC2IPQ8NCF5 419 aa13.17□□□□□ -0.3
MRPL55-204ENST00000348259 BCL2L12Q9HB09 334 aa13.17□□□□□ -0.3
MRPL55-204ENST00000348259 RRAGCQ9HB90 399 aa13.17□□□□□ -0.3
MRPL55-204ENST00000348259 SCN7AQ01118 1682 aa13.16□□□□□ -0.3
MRPL55-204ENST00000348259 PTCD1O75127 700 aaKnown RBP13.16□□□□□ -0.3
MRPL55-204ENST00000348259 SIPA1L3O60292 1781 aaPredicted RBP13.15□□□□□ -0.3
MRPL55-204ENST00000348259 POTECB2RU33 542 aa13.15□□□□□ -0.3
MRPL55-204ENST00000348259 MTHFSP49914 203 aa13.15□□□□□ -0.3
MRPL55-204ENST00000348259 RASSF7Q02833 373 aa13.15□□□□□ -0.3
MRPL55-204ENST00000348259 ARFGEF2Q9Y6D5 1785 aa13.15□□□□□ -0.31
MRPL55-204ENST00000348259 CCER2I3L3R5 266 aa13.14□□□□□ -0.31
MRPL55-204ENST00000348259 ANP32CO43423 234 aa13.14□□□□□ -0.31
MRPL55-204ENST00000348259 CYP19A1P11511 503 aaPredicted RBP13.14□□□□□ -0.31
MRPL55-204ENST00000348259 TNNT2P45379 298 aaPredicted RBP13.14□□□□□ -0.31
MRPL55-204ENST00000348259 NFIXQ14938 502 aa13.14□□□□□ -0.31
MRPL55-204ENST00000348259 DNAJC10Q8IXB1 793 aa13.14□□□□□ -0.31
MRPL55-204ENST00000348259 SMC1BQ8NDV3 1235 aa13.14□□□□□ -0.31
MRPL55-204ENST00000348259 CARMIL3Q8ND23 1372 aa13.14□□□□□ -0.31
MRPL55-204ENST00000348259 COL15A1P39059 1388 aa13.13□□□□□ -0.31
MRPL55-204ENST00000348259 GLTPD2A6NH11 291 aa13.13□□□□□ -0.31
MRPL55-204ENST00000348259 NFKBIEO00221 500 aa13.13□□□□□ -0.31
MRPL55-204ENST00000348259 IL13P35225 146 aa13.13□□□□□ -0.31
MRPL55-204ENST00000348259 USPL1Q5W0Q7 1092 aa13.13□□□□□ -0.31
MRPL55-204ENST00000348259 C16orf71Q8IYS4 520 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-204ENST00000348259 NARFQ9UHQ1 456 aa13.13□□□□□ -0.31
MRPL55-204ENST00000348259 SLC52A2Q9HAB3 445 aa13.12□□□□□ -0.31
MRPL55-204ENST00000348259 LMNB1P20700 586 aa13.11□□□□□ -0.31
MRPL55-204ENST00000348259 C1orf141Q5JVX7 400 aa13.11□□□□□ -0.31
MRPL55-204ENST00000348259 SULT6B1Q6IMI4 303 aa13.11□□□□□ -0.31
MRPL55-204ENST00000348259 ZBTB1Q9Y2K1 713 aa13.11□□□□□ -0.31
MRPL55-204ENST00000348259 BCORQ6W2J9 1755 aa13.1□□□□□ -0.31
MRPL55-204ENST00000348259 VEGFAP15692 232 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-204ENST00000348259 AKAP4Q5JQC9 854 aa13.1□□□□□ -0.31
MRPL55-204ENST00000348259 PANK3Q9H999 370 aa13.1□□□□□ -0.31
MRPL55-204ENST00000348259 LGR6Q9HBX8 967 aa13.1□□□□□ -0.31
MRPL55-204ENST00000348259 CACNA1SQ13698 1873 aa13.09□□□□□ -0.31
MRPL55-204ENST00000348259 TNS4Q8IZW8 715 aa13.09□□□□□ -0.31
MRPL55-204ENST00000348259 VSIG10Q8N0Z9 540 aa13.09□□□□□ -0.31
MRPL55-204ENST00000348259 SLX4Q8IY92 1834 aa13.09□□□□□ -0.31
MRPL55-204ENST00000348259 RNMTO43148 476 aaKnown RBP13.08□□□□□ -0.32
MRPL55-204ENST00000348259 ZPR1O75312 459 aa13.08□□□□□ -0.32
MRPL55-204ENST00000348259 SERPINB2P05120 415 aa13.08□□□□□ -0.32
MRPL55-204ENST00000348259 HSPA1AP0DMV8 641 aaKnown RBP13.08□□□□□ -0.32
MRPL55-204ENST00000348259 HSPA1BP0DMV9 641 aaKnown RBP13.08□□□□□ -0.32
MRPL55-204ENST00000348259 SLC39A6Q13433 755 aa13.08□□□□□ -0.32
MRPL55-204ENST00000348259 TTLL6Q8N841 843 aa13.08□□□□□ -0.32
MRPL55-204ENST00000348259 ADAMTSL1Q8N6G6 1762 aa13.07□□□□□ -0.32
MRPL55-204ENST00000348259 EIF5P55010 431 aaKnown RBP13.07□□□□□ -0.32
MRPL55-204ENST00000348259 LTBP3Q9NS15 1303 aa13.07□□□□□ -0.32
MRPL55-204ENST00000348259 SCN4AP35499 1836 aa13.06□□□□□ -0.32
MRPL55-204ENST00000348259 COL3A1P02461 1466 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-204ENST00000348259 AMER1Q5JTC6 1135 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-204ENST00000348259 C2CD5Q86YS7 1000 aa13.05□□□□□ -0.32
MRPL55-204ENST00000348259 MORC1Q86VD1 984 aa13.04□□□□□ -0.32
MRPL55-204ENST00000348259 PRKRIP1Q9H875 184 aaPredicted RBP13.04□□□□□ -0.32
MRPL55-204ENST00000348259 H0YIN7 160 aa13.03□□□□□ -0.32
MRPL55-204ENST00000348259 CAPN15O75808 1086 aa13.03□□□□□ -0.32
MRPL55-204ENST00000348259 MTHFSDQ2M296 383 aaKnown RBP13.03□□□□□ -0.32
MRPL55-204ENST00000348259 PRR5LQ6MZQ0 368 aa13.03□□□□□ -0.32
MRPL55-204ENST00000348259 POTEIP0CG38 1075 aa13.02□□□□□ -0.33
MRPL55-204ENST00000348259 POTEJP0CG39 1038 aa13.02□□□□□ -0.33
MRPL55-204ENST00000348259 TBC1D9BQ66K14 1250 aa13.02□□□□□ -0.33
MRPL55-204ENST00000348259 BRIP1Q9BX63 1249 aa13.02□□□□□ -0.33
MRPL55-204ENST00000348259 CREBZFQ9NS37 354 aa13.02□□□□□ -0.33
MRPL55-204ENST00000348259 PDZRN3Q9UPQ7 1066 aa13.02□□□□□ -0.33
MRPL55-204ENST00000348259 PASKQ96RG2 1323 aa13.02□□□□□ -0.33
MRPL55-204ENST00000348259 PER1O15534 1290 aaPredicted RBP13.01□□□□□ -0.33
MRPL55-204ENST00000348259 POLR3GLQ9BT43 218 aa13.01□□□□□ -0.33
MRPL55-204ENST00000348259 HEG1Q9ULI3 1381 aa13.01□□□□□ -0.33
MRPL55-204ENST00000348259 THSD7BQ9C0I4 1608 aa13□□□□□ -0.33
MRPL55-204ENST00000348259 SNED1Q8TER0 1413 aa13□□□□□ -0.33
MRPL55-204ENST00000348259 CNTNAP1P78357 1384 aa13□□□□□ -0.33
MRPL55-204ENST00000348259 CEMIPQ8WUJ3 1361 aa13□□□□□ -0.33
MRPL55-204ENST00000348259 CHADLQ6NUI6 762 aa13□□□□□ -0.33
MRPL55-204ENST00000348259 C7orf43Q8WVR3 580 aa13□□□□□ -0.33
MRPL55-204ENST00000348259 ZNF496Q96IT1 587 aaPredicted RBP13□□□□□ -0.33
MRPL55-204ENST00000348259 A0A087WZG4 1122 aa12.99□□□□□ -0.33
MRPL55-204ENST00000348259 C21orf2O43822 256 aa12.99□□□□□ -0.33
MRPL55-204ENST00000348259 CAMTA2O94983 1202 aa12.99□□□□□ -0.33
MRPL55-204ENST00000348259 CENPBP07199 599 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-204ENST00000348259 HMOX1P09601 288 aa12.99□□□□□ -0.33
MRPL55-204ENST00000348259 CANXP27824 592 aaKnown RBP12.99□□□□□ -0.33
MRPL55-204ENST00000348259 L3MBTL3Q96JM7 780 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-204ENST00000348259 SRGNP10124 158 aa12.98□□□□□ -0.33
MRPL55-204ENST00000348259 PDE6BP35913 854 aa12.98□□□□□ -0.33
MRPL55-204ENST00000348259 IL6STP40189 918 aaPredicted RBP12.98□□□□□ -0.33
MRPL55-204ENST00000348259 RALBP1Q15311 655 aa12.98□□□□□ -0.33
MRPL55-204ENST00000348259 ERFEQ4G0M1 354 aa12.98□□□□□ -0.33
MRPL55-204ENST00000348259 STYK1Q6J9G0 422 aa12.98□□□□□ -0.33
MRPL55-204ENST00000348259 DPY19L2Q6NUT2 758 aa12.98□□□□□ -0.33
MRPL55-204ENST00000348259 IL17REQ8NFR9 667 aa12.98□□□□□ -0.33
MRPL55-204ENST00000348259 KLRG2A4D1S0 409 aaPredicted RBP12.97□□□□□ -0.33
MRPL55-204ENST00000348259 FOXN1O15353 648 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms