RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 CLCN1P35523 988 aa26.25■■□□□ 1.79
PTPN18-202ENST00000347849 TNPO1Q92973 898 aaKnown RBP26.25■■□□□ 1.79
PTPN18-202ENST00000347849 PRDM11Q9NQV5 511 aa26.25■■□□□ 1.79
PTPN18-202ENST00000347849 NAP1L5Q96NT1 182 aaPredicted RBP26.25■■□□□ 1.79
PTPN18-202ENST00000347849 SPG7Q9UQ90 795 aa26.25■■□□□ 1.79
PTPN18-202ENST00000347849 EXOC6BQ9Y2D4 811 aa26.25■■□□□ 1.79
PTPN18-202ENST00000347849 HSP90AB1P08238 724 aaKnown RBP26.24■■□□□ 1.79
PTPN18-202ENST00000347849 SLC52A2Q9HAB3 445 aa26.24■■□□□ 1.79
PTPN18-202ENST00000347849 CACNA1FO60840 1977 aa26.24■■□□□ 1.79
PTPN18-202ENST00000347849 ADAMTS7Q9UKP4 1686 aa26.24■■□□□ 1.79
PTPN18-202ENST00000347849 GNAI3P08754 354 aa26.24■■□□□ 1.79
PTPN18-202ENST00000347849 SIPA1L3O60292 1781 aaPredicted RBP26.23■■□□□ 1.79
PTPN18-202ENST00000347849 ADCY9O60503 1353 aa26.23■■□□□ 1.79
PTPN18-202ENST00000347849 ZNF790Q6PG37 636 aa26.22■■□□□ 1.79
PTPN18-202ENST00000347849 IFNL2Q8IZJ0 200 aa26.22■■□□□ 1.79
PTPN18-202ENST00000347849 DBF4Q9UBU7 674 aaPredicted RBP26.22■■□□□ 1.79
PTPN18-202ENST00000347849 BEND3Q5T5X7 828 aa26.21■■□□□ 1.79
PTPN18-202ENST00000347849 SRCIN1Q9C0H9 1055 aa26.21■■□□□ 1.79
PTPN18-202ENST00000347849 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.21■■□□□ 1.79
PTPN18-202ENST00000347849 PXDNLA1KZ92 1463 aa26.21■■□□□ 1.79
PTPN18-202ENST00000347849 HMMRO75330 724 aa26.21■■□□□ 1.79
PTPN18-202ENST00000347849 NBPF7P0C2Y1 421 aaPredicted RBP26.21■■□□□ 1.79
PTPN18-202ENST00000347849 TBC1D9Q6ZT07 1266 aa26.21■■□□□ 1.79
PTPN18-202ENST00000347849 DNAAF4Q8WXU2 420 aa26.21■■□□□ 1.79
PTPN18-202ENST00000347849 FOXD4L1Q9NU39 408 aa26.21■■□□□ 1.79
PTPN18-202ENST00000347849 ATP8B2P98198 1209 aa26.2■■□□□ 1.78
PTPN18-202ENST00000347849 UBTFL1P0CB47 393 aaPredicted RBP26.19■■□□□ 1.78
PTPN18-202ENST00000347849 HSP90AA1P07900 732 aaKnown RBP26.19■■□□□ 1.78
PTPN18-202ENST00000347849 KIF2CQ99661 725 aa26.18■■□□□ 1.78
PTPN18-202ENST00000347849 PDIA6Q15084 440 aa26.17■■□□□ 1.78
PTPN18-202ENST00000347849 TTC22Q5TAA0 569 aa26.17■■□□□ 1.78
PTPN18-202ENST00000347849 TOM1L2Q6ZVM7 507 aa26.17■■□□□ 1.78
PTPN18-202ENST00000347849 GBP4Q96PP9 640 aa26.17■■□□□ 1.78
PTPN18-202ENST00000347849 ZNF496Q96IT1 587 aaPredicted RBP26.17■■□□□ 1.78
PTPN18-202ENST00000347849 WDR17Q8IZU2 1322 aa26.17■■□□□ 1.78
PTPN18-202ENST00000347849 ABCC6O95255 1503 aa26.16■■□□□ 1.78
PTPN18-202ENST00000347849 CD2BP2O95400 341 aaKnown RBP26.16■■□□□ 1.78
PTPN18-202ENST00000347849 RAB3GAP1Q15042 981 aa26.16■■□□□ 1.78
PTPN18-202ENST00000347849 GAS2L3Q86XJ1 694 aa26.16■■□□□ 1.78
PTPN18-202ENST00000347849 CIZ1Q9ULV3 898 aaPredicted RBP26.16■■□□□ 1.78
PTPN18-202ENST00000347849 MAP3K2Q9Y2U5 619 aa26.16■■□□□ 1.78
PTPN18-202ENST00000347849 SCN11AQ9UI33 1791 aa26.16■■□□□ 1.78
PTPN18-202ENST00000347849 DCAF5Q96JK2 942 aa26.15■■□□□ 1.78
PTPN18-202ENST00000347849 ISY1Q9ULR0 285 aaKnown RBP26.15■■□□□ 1.78
PTPN18-202ENST00000347849 AIMP1Q12904 312 aaKnown RBP26.14■■□□□ 1.78
PTPN18-202ENST00000347849 TSHZ3Q63HK5 1081 aa26.14■■□□□ 1.78
PTPN18-202ENST00000347849 N4BP2Q86UW6 1770 aaPredicted RBP26.14■■□□□ 1.78
PTPN18-202ENST00000347849 STRN4Q9NRL3 753 aa26.14■■□□□ 1.77
PTPN18-202ENST00000347849 COL5A2P05997 1499 aaPredicted RBP26.13■■□□□ 1.77
PTPN18-202ENST00000347849 PIP4K2AP48426 406 aaPredicted RBP26.13■■□□□ 1.77
PTPN18-202ENST00000347849 RBM42Q9BTD8 480 aaKnown RBP26.13■■□□□ 1.77
PTPN18-202ENST00000347849 ESPNB1AK53 854 aa26.12■■□□□ 1.77
PTPN18-202ENST00000347849 CWF19L2Q2TBE0 894 aaKnown RBP26.12■■□□□ 1.77
PTPN18-202ENST00000347849 LARP1Q6PKG0 1096 aaKnown RBP26.12■■□□□ 1.77
PTPN18-202ENST00000347849 PPP1R42Q7Z4L9 355 aa26.12■■□□□ 1.77
PTPN18-202ENST00000347849 CHMP4AQ9BY43 222 aa26.12■■□□□ 1.77
PTPN18-202ENST00000347849 USP16Q9Y5T5 823 aa26.12■■□□□ 1.77
PTPN18-202ENST00000347849 MYL6BP14649 208 aa26.11■■□□□ 1.77
PTPN18-202ENST00000347849 SDSP20132 328 aa26.11■■□□□ 1.77
PTPN18-202ENST00000347849 KSR2Q6VAB6 950 aa26.11■■□□□ 1.77
PTPN18-202ENST00000347849 DDX21Q9NR30 783 aaKnown RBP eCLIP26.11■■□□□ 1.77
PTPN18-202ENST00000347849 CDC45O75419 566 aa26.1■■□□□ 1.77
PTPN18-202ENST00000347849 SKOR2Q2VWA4 1001 aaPredicted RBP26.1■■□□□ 1.77
PTPN18-202ENST00000347849 PKD1L3Q7Z443 1732 aa26.1■■□□□ 1.77
PTPN18-202ENST00000347849 SSH3Q8TE77 659 aa26.1■■□□□ 1.77
PTPN18-202ENST00000347849 TRIM44Q96DX7 344 aaPredicted RBP26.1■■□□□ 1.77
PTPN18-202ENST00000347849 C5P01031 1676 aa26.1■■□□□ 1.77
PTPN18-202ENST00000347849 IBTKQ9P2D0 1353 aaPredicted RBP26.1■■□□□ 1.77
PTPN18-202ENST00000347849 ERBB4Q15303 1308 aa26.09■■□□□ 1.77
PTPN18-202ENST00000347849 K7ELQ4 463 aaPredicted RBP26.09■■□□□ 1.77
PTPN18-202ENST00000347849 HYPKQ9NX55 129 aa26.09■■□□□ 1.77
PTPN18-202ENST00000347849 CABP4P57796 275 aa26.09■■□□□ 1.77
PTPN18-202ENST00000347849 LRRCC1Q9C099 1032 aa26.09■■□□□ 1.77
PTPN18-202ENST00000347849 PDE1AP54750 535 aa26.08■■□□□ 1.77
PTPN18-202ENST00000347849 ZCRB1Q8TBF4 217 aaKnown RBP26.08■■□□□ 1.77
PTPN18-202ENST00000347849 SALL3Q9BXA9 1300 aa26.07■■□□□ 1.76
PTPN18-202ENST00000347849 ABCA3Q99758 1704 aa26.07■■□□□ 1.76
PTPN18-202ENST00000347849 MRC1P22897 1456 aa26.07■■□□□ 1.76
PTPN18-202ENST00000347849 SRGAP3O43295 1099 aa26.07■■□□□ 1.76
PTPN18-202ENST00000347849 POLA2Q14181 598 aa26.06■■□□□ 1.76
PTPN18-202ENST00000347849 IL1RAPL2Q9NP60 686 aa26.06■■□□□ 1.76
PTPN18-202ENST00000347849 TTC5Q8N0Z6 440 aa26.06■■□□□ 1.76
PTPN18-202ENST00000347849 SSFA2P28290 1259 aa26.05■■□□□ 1.76
PTPN18-202ENST00000347849 DDX54Q8TDD1 881 aaKnown RBP26.05■■□□□ 1.76
PTPN18-202ENST00000347849 SURF6O75683 361 aaKnown RBP26.04■■□□□ 1.76
PTPN18-202ENST00000347849 LRP10Q7Z4F1 713 aa26.04■■□□□ 1.76
PTPN18-202ENST00000347849 XAGE3Q8WTP9 111 aa26.04■■□□□ 1.76
PTPN18-202ENST00000347849 CARD10Q9BWT7 1032 aa26.04■■□□□ 1.76
PTPN18-202ENST00000347849 EVA1CP58658 441 aa26.04■■□□□ 1.76
PTPN18-202ENST00000347849 COPS6Q7L5N1 327 aa26.04■■□□□ 1.76
PTPN18-202ENST00000347849 OSBPL3Q9H4L5 887 aa26.04■■□□□ 1.76
PTPN18-202ENST00000347849 NHSL1Q5SYE7 1610 aa26.03■■□□□ 1.76
PTPN18-202ENST00000347849 SNRPA1P09661 255 aaKnown RBP26.03■■□□□ 1.76
PTPN18-202ENST00000347849 IL2RBP14784 551 aa26.03■■□□□ 1.76
PTPN18-202ENST00000347849 PTMSP20962 102 aa26.03■■□□□ 1.76
PTPN18-202ENST00000347849 C9orf78Q9NZ63 289 aaPredicted RBP26.03■■□□□ 1.76
PTPN18-202ENST00000347849 IGKV5-2P06315 115 aa26.02■■□□□ 1.76
PTPN18-202ENST00000347849 FMNL2Q96PY5 1086 aa26.02■■□□□ 1.76
PTPN18-202ENST00000347849 PCDH11XQ9BZA7 1347 aa26.02■■□□□ 1.76
PTPN18-202ENST00000347849 PCDH11YQ9BZA8 1340 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms