RNA–Protein interactions for RNA: ENST00000347598.8

CACNA1C-204, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-204ENST00000347598 MIS18AQ9NYP9 233 aa13.79□□□□□ -0.2
CACNA1C-204ENST00000347598 CCDC7Q96M83 1385 aa13.79□□□□□ -0.2
CACNA1C-204ENST00000347598 MAP3K11Q16584 847 aa13.79□□□□□ -0.2
CACNA1C-204ENST00000347598 TCERG1LQ5VWI1 586 aa13.79□□□□□ -0.2
CACNA1C-204ENST00000347598 CCDC196A0A1B0GTZ2 297 aa13.79□□□□□ -0.2
CACNA1C-204ENST00000347598 USO1O60763 962 aaKnown RBP13.79□□□□□ -0.2
CACNA1C-204ENST00000347598 LRSAM1Q6UWE0 723 aa13.79□□□□□ -0.2
CACNA1C-204ENST00000347598 GBP3Q9H0R5 595 aa13.79□□□□□ -0.2
CACNA1C-204ENST00000347598 CABP5Q9NP86 173 aa13.79□□□□□ -0.2
CACNA1C-204ENST00000347598 CADPSQ9ULU8 1353 aa13.79□□□□□ -0.2
CACNA1C-204ENST00000347598 MYO1BO43795 1136 aa13.78□□□□□ -0.2
CACNA1C-204ENST00000347598 ECM2O94769 699 aaPredicted RBP13.78□□□□□ -0.2
CACNA1C-204ENST00000347598 CCDC83Q8IWF9 413 aa13.78□□□□□ -0.2
CACNA1C-204ENST00000347598 CALML4Q96GE6 196 aa13.78□□□□□ -0.2
CACNA1C-204ENST00000347598 SYNCQ9H7C4 482 aa13.78□□□□□ -0.2
CACNA1C-204ENST00000347598 CCDC194A0A1B0GVG4 234 aa13.78□□□□□ -0.2
CACNA1C-204ENST00000347598 PODXL2Q9NZ53 605 aa13.78□□□□□ -0.2
CACNA1C-204ENST00000347598 CKAP2LQ8IYA6 745 aa13.78□□□□□ -0.2
CACNA1C-204ENST00000347598 TRMT112Q9UI30 125 aaKnown RBP13.78□□□□□ -0.2
CACNA1C-204ENST00000347598 CATIPQ7Z7H3 387 aa13.78□□□□□ -0.2
CACNA1C-204ENST00000347598 PPP1R14CQ8TAE6 165 aa13.78□□□□□ -0.2
CACNA1C-204ENST00000347598 CPLX3Q8WVH0 158 aa13.78□□□□□ -0.2
CACNA1C-204ENST00000347598 ZNF644Q9H582 1327 aaPredicted RBP13.78□□□□□ -0.2
CACNA1C-204ENST00000347598 KIF20AO95235 890 aa13.78□□□□□ -0.2
CACNA1C-204ENST00000347598 UBXN4Q92575 508 aa13.78□□□□□ -0.2
CACNA1C-204ENST00000347598 UTP14AQ9BVJ6 771 aaKnown RBP13.78□□□□□ -0.2
CACNA1C-204ENST00000347598 IFIT5Q13325 482 aaKnown RBP13.77□□□□□ -0.2
CACNA1C-204ENST00000347598 RAB3IL1Q8TBN0 382 aa13.77□□□□□ -0.2
CACNA1C-204ENST00000347598 ZNF213O14771 459 aa13.77□□□□□ -0.2
CACNA1C-204ENST00000347598 MTIF2P46199 727 aaKnown RBP13.77□□□□□ -0.2
CACNA1C-204ENST00000347598 KIF4BQ2VIQ3 1234 aa13.77□□□□□ -0.2
CACNA1C-204ENST00000347598 ATF7IPQ6VMQ6 1270 aa13.77□□□□□ -0.2
CACNA1C-204ENST00000347598 BOLA2Q9H3K6 86 aa13.77□□□□□ -0.2
CACNA1C-204ENST00000347598 FSD2A1L4K1 749 aa13.77□□□□□ -0.21
CACNA1C-204ENST00000347598 CCDC40Q4G0X9 1142 aa13.77□□□□□ -0.21
CACNA1C-204ENST00000347598 SPATA24Q86W54 205 aa13.77□□□□□ -0.21
CACNA1C-204ENST00000347598 ZWINTO95229 277 aa13.77□□□□□ -0.21
CACNA1C-204ENST00000347598 MCM3P25205 808 aa13.77□□□□□ -0.21
CACNA1C-204ENST00000347598 WIZO95785 1651 aa13.77□□□□□ -0.21
CACNA1C-204ENST00000347598 STXBP4Q6ZWJ1 553 aa13.77□□□□□ -0.21
CACNA1C-204ENST00000347598 TTC21AQ8NDW8 1320 aa13.77□□□□□ -0.21
CACNA1C-204ENST00000347598 ZSCAN12O43309 604 aa13.76□□□□□ -0.21
CACNA1C-204ENST00000347598 PAFAH1B1P43034 410 aa13.76□□□□□ -0.21
CACNA1C-204ENST00000347598 NGLY1Q96IV0 654 aa13.76□□□□□ -0.21
CACNA1C-204ENST00000347598 TOP1P11387 765 aaKnown RBP13.76□□□□□ -0.21
CACNA1C-204ENST00000347598 NOP2P46087 812 aaKnown RBP13.76□□□□□ -0.21
CACNA1C-204ENST00000347598 SPECC1Q5M775 1068 aa13.76□□□□□ -0.21
CACNA1C-204ENST00000347598 SCAPERQ9BY12 1400 aa13.76□□□□□ -0.21
CACNA1C-204ENST00000347598 C8orf76Q96K31 380 aa13.76□□□□□ -0.21
CACNA1C-204ENST00000347598 BRD4O60885 1362 aaPredicted RBP13.76□□□□□ -0.21
CACNA1C-204ENST00000347598 HLTFQ14527 1009 aaKnown RBP eCLIP13.76□□□□□ -0.21
CACNA1C-204ENST00000347598 CCDC144CPQ8IYA2 1237 aa13.76□□□□□ -0.21
CACNA1C-204ENST00000347598 GOLGA8AA7E2F4 631 aa13.75□□□□□ -0.21
CACNA1C-204ENST00000347598 GOLGA8BA8MQT2 603 aa13.75□□□□□ -0.21
CACNA1C-204ENST00000347598 IFIT3O14879 490 aaKnown RBP13.75□□□□□ -0.21
CACNA1C-204ENST00000347598 ZMYND15Q9H091 742 aa13.75□□□□□ -0.21
CACNA1C-204ENST00000347598 MROH2BQ7Z745 1585 aa13.75□□□□□ -0.21
CACNA1C-204ENST00000347598 PRPF40BQ6NWY9 871 aaKnown RBP13.75□□□□□ -0.21
CACNA1C-204ENST00000347598 APBB1IPQ7Z5R6 666 aaPredicted RBP13.75□□□□□ -0.21
CACNA1C-204ENST00000347598 IKBKGQ9Y6K9 419 aa13.75□□□□□ -0.21
CACNA1C-204ENST00000347598 FANCD2Q9BXW9 1451 aa13.75□□□□□ -0.21
CACNA1C-204ENST00000347598 CUX1P39880 1505 aa13.75□□□□□ -0.21
CACNA1C-204ENST00000347598 YEATS4O95619 227 aa13.75□□□□□ -0.21
CACNA1C-204ENST00000347598 SLC12A5Q9H2X9 1139 aa13.75□□□□□ -0.21
CACNA1C-204ENST00000347598 GRPEL1Q9HAV7 217 aa13.75□□□□□ -0.21
CACNA1C-204ENST00000347598 HLA-DOAP06340 250 aa13.75□□□□□ -0.21
CACNA1C-204ENST00000347598 ACTN2P35609 894 aa13.75□□□□□ -0.21
CACNA1C-204ENST00000347598 CCDC174Q6PII3 467 aa13.75□□□□□ -0.21
CACNA1C-204ENST00000347598 SREK1Q8WXA9 508 aaKnown RBP13.75□□□□□ -0.21
CACNA1C-204ENST00000347598 AMPD3Q01432 767 aa13.74□□□□□ -0.21
CACNA1C-204ENST00000347598 CNNM3Q8NE01 707 aa13.74□□□□□ -0.21
CACNA1C-204ENST00000347598 ALS2CR12Q96Q35 445 aa13.74□□□□□ -0.21
CACNA1C-204ENST00000347598 ST5P78524 1137 aa13.74□□□□□ -0.21
CACNA1C-204ENST00000347598 BMS1Q14692 1282 aaKnown RBP13.74□□□□□ -0.21
CACNA1C-204ENST00000347598 KAT14Q9H8E8 782 aa13.74□□□□□ -0.21
CACNA1C-204ENST00000347598 ANO10Q9NW15 660 aa13.74□□□□□ -0.21
CACNA1C-204ENST00000347598 FERMT3Q86UX7 667 aa13.74□□□□□ -0.21
CACNA1C-204ENST00000347598 URI1O94763 535 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-204ENST00000347598 CCDC175P0C221 793 aa13.73□□□□□ -0.21
CACNA1C-204ENST00000347598 RNF41Q9H4P4 317 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-204ENST00000347598 USHBP1Q8N6Y0 703 aa13.73□□□□□ -0.21
CACNA1C-204ENST00000347598 SH3BP5O60239 455 aa13.73□□□□□ -0.21
CACNA1C-204ENST00000347598 GPTP24298 496 aa13.73□□□□□ -0.21
CACNA1C-204ENST00000347598 MVPQ14764 893 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-204ENST00000347598 CCDC12Q8WUD4 166 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-204ENST00000347598 SFPQP23246 707 aaKnown RBP eCLIP13.73□□□□□ -0.21
CACNA1C-204ENST00000347598 PTPN14Q15678 1187 aa13.73□□□□□ -0.21
CACNA1C-204ENST00000347598 KIF1BPQ96EK5 621 aa13.73□□□□□ -0.21
CACNA1C-204ENST00000347598 CFAP57Q96MR6 1250 aa13.73□□□□□ -0.21
CACNA1C-204ENST00000347598 SMARCA5O60264 1052 aaPredicted RBP13.72□□□□□ -0.21
CACNA1C-204ENST00000347598 RAB11FIP3O75154 756 aa13.72□□□□□ -0.21
CACNA1C-204ENST00000347598 RFC4P35249 363 aa13.72□□□□□ -0.21
CACNA1C-204ENST00000347598 AFAP1Q8N556 730 aa13.72□□□□□ -0.21
CACNA1C-204ENST00000347598 KCNH5Q8NCM2 988 aa13.72□□□□□ -0.21
CACNA1C-204ENST00000347598 PHACTR2O75167 634 aa13.72□□□□□ -0.21
CACNA1C-204ENST00000347598 DDX46Q7L014 1031 aaKnown RBP13.72□□□□□ -0.21
CACNA1C-204ENST00000347598 DPH6Q7L8W6 267 aa13.72□□□□□ -0.21
CACNA1C-204ENST00000347598 TCP11L1Q9NUJ3 509 aa13.72□□□□□ -0.21
CACNA1C-204ENST00000347598 NDC80O14777 642 aa13.72□□□□□ -0.21
CACNA1C-204ENST00000347598 A0A1W2PRG0 241 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms