RNA–Protein interactions for RNA: ENST00000346623.6

ALDH1A3-202, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 1 (best) BASIC

Gene ALDH1A3, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-202ENST00000346623 RABEP1Q15276 862 aa17.72■□□□□ 0.43
ALDH1A3-202ENST00000346623 RHPN1Q8TCX5 695 aa17.72■□□□□ 0.43
ALDH1A3-202ENST00000346623 NCOA3Q9Y6Q9 1424 aa17.72■□□□□ 0.43
ALDH1A3-202ENST00000346623 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.72■□□□□ 0.43
ALDH1A3-202ENST00000346623 RAB3GAP1Q15042 981 aa17.72■□□□□ 0.43
ALDH1A3-202ENST00000346623 KLHDC4Q8TBB5 520 aa17.72■□□□□ 0.43
ALDH1A3-202ENST00000346623 SSH3Q8TE77 659 aa17.72■□□□□ 0.43
ALDH1A3-202ENST00000346623 ERBB3P21860 1342 aa17.71■□□□□ 0.43
ALDH1A3-202ENST00000346623 REC8O95072 547 aa17.71■□□□□ 0.43
ALDH1A3-202ENST00000346623 CHMLP26374 656 aa17.71■□□□□ 0.43
ALDH1A3-202ENST00000346623 AMOTQ4VCS5 1084 aa17.71■□□□□ 0.43
ALDH1A3-202ENST00000346623 RAPGEF4Q8WZA2 1011 aa17.71■□□□□ 0.43
ALDH1A3-202ENST00000346623 ESYT1Q9BSJ8 1104 aa17.71■□□□□ 0.43
ALDH1A3-202ENST00000346623 OSBPL3Q9H4L5 887 aa17.71■□□□□ 0.43
ALDH1A3-202ENST00000346623 FOXD4L6Q3SYB3 417 aaPredicted RBP17.71■□□□□ 0.43
ALDH1A3-202ENST00000346623 FOXD4L3Q6VB84 417 aaPredicted RBP17.71■□□□□ 0.43
ALDH1A3-202ENST00000346623 SIL1Q9H173 461 aa17.71■□□□□ 0.43
ALDH1A3-202ENST00000346623 DBF4Q9UBU7 674 aaPredicted RBP17.71■□□□□ 0.43
ALDH1A3-202ENST00000346623 LRRC37A3O60309 1634 aa17.71■□□□□ 0.42
ALDH1A3-202ENST00000346623 FAM208AQ9UK61 1670 aaKnown RBP17.71■□□□□ 0.42
ALDH1A3-202ENST00000346623 TMEM94Q12767 1356 aa17.7■□□□□ 0.42
ALDH1A3-202ENST00000346623 C1orf167Q5SNV9 1468 aa17.69■□□□□ 0.42
ALDH1A3-202ENST00000346623 BABAM1Q9NWV8 329 aa17.69■□□□□ 0.42
ALDH1A3-202ENST00000346623 DDX54Q8TDD1 881 aaKnown RBP17.68■□□□□ 0.42
ALDH1A3-202ENST00000346623 XRCC6P12956 609 aaKnown RBP eCLIP17.67■□□□□ 0.42
ALDH1A3-202ENST00000346623 TPRNQ4KMQ1 711 aa17.67■□□□□ 0.42
ALDH1A3-202ENST00000346623 CWC27Q6UX04 472 aaKnown RBP17.67■□□□□ 0.42
ALDH1A3-202ENST00000346623 SPG7Q9UQ90 795 aa17.67■□□□□ 0.42
ALDH1A3-202ENST00000346623 USP16Q9Y5T5 823 aa17.67■□□□□ 0.42
ALDH1A3-202ENST00000346623 MCTP1Q6DN14 999 aa17.67■□□□□ 0.42
ALDH1A3-202ENST00000346623 ZNF496Q96IT1 587 aaPredicted RBP17.67■□□□□ 0.42
ALDH1A3-202ENST00000346623 GOLGA6L3A6NEY3 463 aa17.66■□□□□ 0.42
ALDH1A3-202ENST00000346623 ST18O60284 1047 aa17.66■□□□□ 0.42
ALDH1A3-202ENST00000346623 POLA2Q14181 598 aa17.66■□□□□ 0.42
ALDH1A3-202ENST00000346623 ZNF790Q6PG37 636 aa17.66■□□□□ 0.42
ALDH1A3-202ENST00000346623 NCLP19338 710 aaKnown RBP17.66■□□□□ 0.42
ALDH1A3-202ENST00000346623 RIC3Q7Z5B4 369 aa17.65■□□□□ 0.42
ALDH1A3-202ENST00000346623 PI4K2BQ8TCG2 481 aa17.65■□□□□ 0.42
ALDH1A3-202ENST00000346623 SUCLG2Q96I99 432 aa17.65■□□□□ 0.42
ALDH1A3-202ENST00000346623 DDX11L8A8MPP1 907 aa17.65■□□□□ 0.42
ALDH1A3-202ENST00000346623 KSR2Q6VAB6 950 aa17.65■□□□□ 0.42
ALDH1A3-202ENST00000346623 GBP4Q96PP9 640 aa17.65■□□□□ 0.42
ALDH1A3-202ENST00000346623 CCDC9Q9Y3X0 531 aaKnown RBP17.65■□□□□ 0.42
ALDH1A3-202ENST00000346623 CPA1P15085 419 aa17.65■□□□□ 0.42
ALDH1A3-202ENST00000346623 PDIA6Q15084 440 aa17.65■□□□□ 0.42
ALDH1A3-202ENST00000346623 RGPD5Q99666 1765 aa17.65■□□□□ 0.42
ALDH1A3-202ENST00000346623 COPS6Q7L5N1 327 aa17.64■□□□□ 0.41
ALDH1A3-202ENST00000346623 GAS2L3Q86XJ1 694 aa17.64■□□□□ 0.41
ALDH1A3-202ENST00000346623 CCDC8Q9H0W5 538 aaPredicted RBP17.64■□□□□ 0.41
ALDH1A3-202ENST00000346623 BICC1Q9H694 974 aaKnown RBP17.64■□□□□ 0.41
ALDH1A3-202ENST00000346623 XAGE3Q8WTP9 111 aa17.64■□□□□ 0.41
ALDH1A3-202ENST00000346623 KIF1BPQ96EK5 621 aa17.64■□□□□ 0.41
ALDH1A3-202ENST00000346623 KAZALD1Q96I82 304 aa17.64■□□□□ 0.41
ALDH1A3-202ENST00000346623 ATP5J2-PTCD1G3V325 749 aa17.63■□□□□ 0.41
ALDH1A3-202ENST00000346623 CYP27B1O15528 508 aa17.63■□□□□ 0.41
ALDH1A3-202ENST00000346623 PTCD1O75127 700 aaKnown RBP17.63■□□□□ 0.41
ALDH1A3-202ENST00000346623 BAG4O95429 457 aaKnown RBP17.63■□□□□ 0.41
ALDH1A3-202ENST00000346623 TATP17735 454 aaPredicted RBP17.63■□□□□ 0.41
ALDH1A3-202ENST00000346623 STAP2Q9UGK3 403 aa17.63■□□□□ 0.41
ALDH1A3-202ENST00000346623 ADAMTSL3P82987 1691 aa17.63■□□□□ 0.41
ALDH1A3-202ENST00000346623 TMX3Q96JJ7 454 aa17.63■□□□□ 0.41
ALDH1A3-202ENST00000346623 CIZ1Q9ULV3 898 aaPredicted RBP17.63■□□□□ 0.41
ALDH1A3-202ENST00000346623 NPHP3Q7Z494 1330 aa17.63■□□□□ 0.41
ALDH1A3-202ENST00000346623 PHKG2P15735 406 aa17.63■□□□□ 0.41
ALDH1A3-202ENST00000346623 MYD88Q99836 296 aa17.63■□□□□ 0.41
ALDH1A3-202ENST00000346623 IGKV5-2P06315 115 aa17.62■□□□□ 0.41
ALDH1A3-202ENST00000346623 SLC52A2Q9HAB3 445 aa17.62■□□□□ 0.41
ALDH1A3-202ENST00000346623 HOXB7P09629 217 aa17.62■□□□□ 0.41
ALDH1A3-202ENST00000346623 TLR7Q9NYK1 1049 aaKnown RBP17.62■□□□□ 0.41
ALDH1A3-202ENST00000346623 EPHA10Q5JZY3 1008 aa17.61■□□□□ 0.41
ALDH1A3-202ENST00000346623 NDUFB9Q9Y6M9 179 aa17.61■□□□□ 0.41
ALDH1A3-202ENST00000346623 AACSQ86V21 672 aa17.61■□□□□ 0.41
ALDH1A3-202ENST00000346623 ZDHHC9Q9Y397 364 aa17.61■□□□□ 0.41
ALDH1A3-202ENST00000346623 DDX49Q9Y6V7 483 aaKnown RBP17.61■□□□□ 0.41
ALDH1A3-202ENST00000346623 MEGF6O75095 1541 aa17.6■□□□□ 0.41
ALDH1A3-202ENST00000346623 GRM8O00222 908 aa17.6■□□□□ 0.41
ALDH1A3-202ENST00000346623 RAB11FIP3O75154 756 aa17.6■□□□□ 0.41
ALDH1A3-202ENST00000346623 DDX21Q9NR30 783 aaKnown RBP eCLIP17.6■□□□□ 0.41
ALDH1A3-202ENST00000346623 ZNF142P52746 1687 aaPredicted RBP17.6■□□□□ 0.41
ALDH1A3-202ENST00000346623 RASEFQ8IZ41 740 aa17.59■□□□□ 0.41
ALDH1A3-202ENST00000346623 KDM6AO15550 1401 aaPredicted RBP17.59■□□□□ 0.41
ALDH1A3-202ENST00000346623 CLASRPQ8N2M8 674 aaKnown RBP17.59■□□□□ 0.41
ALDH1A3-202ENST00000346623 EDC3Q96F86 508 aaKnown RBP17.59■□□□□ 0.41
ALDH1A3-202ENST00000346623 HYPKQ9NX55 129 aa17.59■□□□□ 0.41
ALDH1A3-202ENST00000346623 MED1Q15648 1581 aaPredicted RBP17.59■□□□□ 0.41
ALDH1A3-202ENST00000346623 PRPF40AO75400 957 aaKnown RBP17.58■□□□□ 0.4
ALDH1A3-202ENST00000346623 IFIT2P09913 472 aaKnown RBP17.58■□□□□ 0.4
ALDH1A3-202ENST00000346623 TTC5Q8N0Z6 440 aa17.58■□□□□ 0.4
ALDH1A3-202ENST00000346623 USP54Q70EL1 1684 aa17.58■□□□□ 0.4
ALDH1A3-202ENST00000346623 SASH1O94885 1247 aa17.58■□□□□ 0.4
ALDH1A3-202ENST00000346623 CHGBP05060 677 aa17.58■□□□□ 0.4
ALDH1A3-202ENST00000346623 IFNL2Q8IZJ0 200 aa17.58■□□□□ 0.4
ALDH1A3-202ENST00000346623 EAF2Q96CJ1 260 aaPredicted RBP17.58■□□□□ 0.4
ALDH1A3-202ENST00000346623 STRN4Q9NRL3 753 aa17.58■□□□□ 0.4
ALDH1A3-202ENST00000346623 FSD2A1L4K1 749 aa17.57■□□□□ 0.4
ALDH1A3-202ENST00000346623 COL9A3Q14050 684 aaPredicted RBP17.57■□□□□ 0.4
ALDH1A3-202ENST00000346623 LINS1Q8NG48 757 aa17.57■□□□□ 0.4
ALDH1A3-202ENST00000346623 BOLA2Q9H3K6 86 aa17.57■□□□□ 0.4
ALDH1A3-202ENST00000346623 ZNF330Q9Y3S2 320 aaPredicted RBP17.57■□□□□ 0.4
ALDH1A3-202ENST00000346623 SLIT3O75094 1523 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms