RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 MYH14Q7Z406 1995 aaKnown RBP23.61■■□□□ 1.37
CKLF-202ENST00000345436 COL15A1P39059 1388 aa23.61■■□□□ 1.37
CKLF-202ENST00000345436 KCPQ6ZWJ8 1503 aa23.6■■□□□ 1.37
CKLF-202ENST00000345436 TM4SF1P30408 202 aa23.6■■□□□ 1.37
CKLF-202ENST00000345436 WWC3Q9ULE0 1092 aa23.6■■□□□ 1.37
CKLF-202ENST00000345436 BCS1LQ9Y276 419 aa23.6■■□□□ 1.37
CKLF-202ENST00000345436 C10orf71Q711Q0 1435 aa23.59■■□□□ 1.37
CKLF-202ENST00000345436 GIGYF1O75420 1035 aaPredicted RBP23.59■■□□□ 1.37
CKLF-202ENST00000345436 PIM2Q9P1W9 311 aa23.59■■□□□ 1.37
CKLF-202ENST00000345436 TJP1Q07157 1748 aa23.59■■□□□ 1.37
CKLF-202ENST00000345436 DPEP1P16444 411 aa23.58■■□□□ 1.37
CKLF-202ENST00000345436 IL6STP40189 918 aaPredicted RBP23.57■■□□□ 1.36
CKLF-202ENST00000345436 EIF5P55010 431 aaKnown RBP23.57■■□□□ 1.36
CKLF-202ENST00000345436 GOLGB1Q14789 3259 aaKnown RBP23.57■■□□□ 1.36
CKLF-202ENST00000345436 PXDNLA1KZ92 1463 aa23.56■■□□□ 1.36
CKLF-202ENST00000345436 C4AP0C0L4 1744 aa23.56■■□□□ 1.36
CKLF-202ENST00000345436 POLRMTO00411 1230 aaKnown RBP23.56■■□□□ 1.36
CKLF-202ENST00000345436 DDR1Q08345 913 aa23.56■■□□□ 1.36
CKLF-202ENST00000345436 MCM10Q7L590 875 aa23.56■■□□□ 1.36
CKLF-202ENST00000345436 PNISRQ8TF01 805 aaKnown RBP23.56■■□□□ 1.36
CKLF-202ENST00000345436 MAPK8IP3Q9UPT6 1336 aa23.56■■□□□ 1.36
CKLF-202ENST00000345436 SNRPA1P09661 255 aaKnown RBP23.55■■□□□ 1.36
CKLF-202ENST00000345436 TAF7Q15545 349 aaPredicted RBP23.55■■□□□ 1.36
CKLF-202ENST00000345436 ARHGAP27Q6ZUM4 889 aa23.55■■□□□ 1.36
CKLF-202ENST00000345436 ZNF330Q9Y3S2 320 aaPredicted RBP23.55■■□□□ 1.36
CKLF-202ENST00000345436 NFIXQ14938 502 aa23.54■■□□□ 1.36
CKLF-202ENST00000345436 DALRD3Q5D0E6 543 aaKnown RBP23.54■■□□□ 1.36
CKLF-202ENST00000345436 GPBP1L1Q9HC44 474 aaPredicted RBP23.54■■□□□ 1.36
CKLF-202ENST00000345436 C1QTNF8P60827 252 aa23.53■■□□□ 1.36
CKLF-202ENST00000345436 SERPINB2P05120 415 aa23.52■■□□□ 1.36
CKLF-202ENST00000345436 VIRMAQ69YN4 1812 aaKnown RBP23.52■■□□□ 1.36
CKLF-202ENST00000345436 DDX10Q13206 875 aaKnown RBP23.51■■□□□ 1.35
CKLF-202ENST00000345436 PDZRN3Q9UPQ7 1066 aa23.51■■□□□ 1.35
CKLF-202ENST00000345436 KCNQ3O43525 872 aa23.5■■□□□ 1.35
CKLF-202ENST00000345436 A1BGP04217 495 aa23.5■■□□□ 1.35
CKLF-202ENST00000345436 UBR2Q8IWV8 1755 aa23.5■■□□□ 1.35
CKLF-202ENST00000345436 ATP10DQ9P241 1426 aa23.5■■□□□ 1.35
CKLF-202ENST00000345436 KIF13BQ9NQT8 1826 aa23.49■■□□□ 1.35
CKLF-202ENST00000345436 NPHP1O15259 732 aa23.49■■□□□ 1.35
CKLF-202ENST00000345436 KCNA3P22001 575 aa23.49■■□□□ 1.35
CKLF-202ENST00000345436 DCTN1Q14203 1278 aa23.49■■□□□ 1.35
CKLF-202ENST00000345436 NFE2L2Q16236 605 aa23.49■■□□□ 1.35
CKLF-202ENST00000345436 TBC1D2BQ9UPU7 963 aa23.49■■□□□ 1.35
CKLF-202ENST00000345436 BICDL1Q6ZP65 573 aa23.48■■□□□ 1.35
CKLF-202ENST00000345436 SETDB2Q96T68 719 aa23.48■■□□□ 1.35
CKLF-202ENST00000345436 BCL2L12Q9HB09 334 aa23.48■■□□□ 1.35
CKLF-202ENST00000345436 H0YIN7 160 aa23.47■■□□□ 1.35
CKLF-202ENST00000345436 PLEKHF1Q96S99 279 aa23.47■■□□□ 1.35
CKLF-202ENST00000345436 ZNF652Q9Y2D9 606 aa23.47■■□□□ 1.35
CKLF-202ENST00000345436 USP16Q9Y5T5 823 aa23.47■■□□□ 1.35
CKLF-202ENST00000345436 DZIP3Q86Y13 1208 aaKnown RBP23.46■■□□□ 1.35
CKLF-202ENST00000345436 CHRNA5P30532 468 aa23.45■■□□□ 1.34
CKLF-202ENST00000345436 CLEC4GQ6UXB4 293 aa23.45■■□□□ 1.34
CKLF-202ENST00000345436 MYBBP1AQ9BQG0 1328 aaKnown RBP23.44■■□□□ 1.34
CKLF-202ENST00000345436 PDE6BP35913 854 aa23.44■■□□□ 1.34
CKLF-202ENST00000345436 LMOD3Q0VAK6 560 aa23.44■■□□□ 1.34
CKLF-202ENST00000345436 TBC1D9BQ66K14 1250 aa23.44■■□□□ 1.34
CKLF-202ENST00000345436 ZNF526Q8TF50 670 aaPredicted RBP23.44■■□□□ 1.34
CKLF-202ENST00000345436 SIPA1L3O60292 1781 aaPredicted RBP23.44■■□□□ 1.34
CKLF-202ENST00000345436 ADCY9O60503 1353 aa23.43■■□□□ 1.34
CKLF-202ENST00000345436 CARMIL3Q8ND23 1372 aa23.43■■□□□ 1.34
CKLF-202ENST00000345436 C2CD5Q86YS7 1000 aa23.43■■□□□ 1.34
CKLF-202ENST00000345436 TTLL6Q8N841 843 aa23.43■■□□□ 1.34
CKLF-202ENST00000345436 BRIP1Q9BX63 1249 aa23.43■■□□□ 1.34
CKLF-202ENST00000345436 N4BP2Q86UW6 1770 aaPredicted RBP23.42■■□□□ 1.34
CKLF-202ENST00000345436 RGL2O15211 777 aa23.42■■□□□ 1.34
CKLF-202ENST00000345436 SENP3-EIF4A1A0A087X0R7 540 aa23.41■■□□□ 1.34
CKLF-202ENST00000345436 CAMTA2O94983 1202 aa23.41■■□□□ 1.34
CKLF-202ENST00000345436 ST5P78524 1137 aa23.41■■□□□ 1.34
CKLF-202ENST00000345436 WDR43Q15061 677 aaKnown RBP eCLIP23.4■■□□□ 1.34
CKLF-202ENST00000345436 CNBD1Q8NA66 436 aa23.4■■□□□ 1.34
CKLF-202ENST00000345436 MIS18AQ9NYP9 233 aa23.4■■□□□ 1.34
CKLF-202ENST00000345436 RIPK4P57078 832 aa23.39■■□□□ 1.33
CKLF-202ENST00000345436 PRAMEF22A3QJZ6 481 aa23.38■■□□□ 1.33
CKLF-202ENST00000345436 C9orf131Q5VYM1 1079 aa23.38■■□□□ 1.33
CKLF-202ENST00000345436 BABAM1Q9NWV8 329 aa23.38■■□□□ 1.33
CKLF-202ENST00000345436 ZEB1P37275 1124 aaPredicted RBP23.37■■□□□ 1.33
CKLF-202ENST00000345436 ZNF622Q969S3 477 aaKnown RBP eCLIP23.37■■□□□ 1.33
CKLF-202ENST00000345436 KIAA1551Q9HCM1 1747 aa23.36■■□□□ 1.33
CKLF-202ENST00000345436 PRR5LQ6MZQ0 368 aa23.36■■□□□ 1.33
CKLF-202ENST00000345436 TPTE2Q6XPS3 522 aa23.36■■□□□ 1.33
CKLF-202ENST00000345436 NBPF5PQ86XG9 351 aaPredicted RBP23.36■■□□□ 1.33
CKLF-202ENST00000345436 PIP4K2AP48426 406 aaPredicted RBP23.35■■□□□ 1.33
CKLF-202ENST00000345436 EIF4A1P60842 406 aaKnown RBP23.35■■□□□ 1.33
CKLF-202ENST00000345436 RNF181Q9P0P0 153 aa23.35■■□□□ 1.33
CKLF-202ENST00000345436 TSPYL4Q9UJ04 414 aa23.35■■□□□ 1.33
CKLF-202ENST00000345436 CNKSR1Q969H4 720 aa23.34■■□□□ 1.33
CKLF-202ENST00000345436 KDM2BQ8NHM5 1336 aa23.33■■□□□ 1.33
CKLF-202ENST00000345436 NBPF26B4DH59 902 aa23.33■■□□□ 1.33
CKLF-202ENST00000345436 TMPOP42166 694 aaKnown RBP23.33■■□□□ 1.33
CKLF-202ENST00000345436 NBPF10Q6P3W6 841 aaKnown RBP23.33■■□□□ 1.33
CKLF-202ENST00000345436 KIF6Q6ZMV9 814 aa23.33■■□□□ 1.33
CKLF-202ENST00000345436 NBPF15Q8N660 670 aa23.33■■□□□ 1.33
CKLF-202ENST00000345436 THUMPD2Q9BTF0 503 aaKnown RBP23.33■■□□□ 1.33
CKLF-202ENST00000345436 NIP7Q9Y221 180 aaKnown RBP eCLIP23.33■■□□□ 1.33
CKLF-202ENST00000345436 GTF2E1P29083 439 aaPredicted RBP23.32■■□□□ 1.32
CKLF-202ENST00000345436 RUNDC1Q96C34 613 aa23.32■■□□□ 1.32
CKLF-202ENST00000345436 RRP7AQ9Y3A4 280 aaKnown RBP23.32■■□□□ 1.32
CKLF-202ENST00000345436 NRXN2Q9P2S2 1712 aa23.31■■□□□ 1.32
CKLF-202ENST00000345436 ERVV-1B6SEH8 477 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms