RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ZBTB9Q96C00 473 aa14.04□□□□□ -0.16
COL12A1-202ENST00000345356 GLRX3O76003 335 aaKnown RBP14.03□□□□□ -0.16
COL12A1-202ENST00000345356 SYCP1Q15431 976 aa14.03□□□□□ -0.16
COL12A1-202ENST00000345356 CCDC69A6NI79 296 aa14.03□□□□□ -0.16
COL12A1-202ENST00000345356 SULT6B1Q6IMI4 303 aa14.03□□□□□ -0.16
COL12A1-202ENST00000345356 THUMPD2Q9BTF0 503 aaKnown RBP14.03□□□□□ -0.16
COL12A1-202ENST00000345356 MEX3CQ5U5Q3 659 aaKnown RBP14.03□□□□□ -0.16
COL12A1-202ENST00000345356 TUBB4AP04350 444 aa14.03□□□□□ -0.16
COL12A1-202ENST00000345356 GBP6Q6ZN66 633 aa14.03□□□□□ -0.16
COL12A1-202ENST00000345356 NBPF11Q86T75 865 aa14.03□□□□□ -0.16
COL12A1-202ENST00000345356 ERO1AQ96HE7 468 aa14.03□□□□□ -0.16
COL12A1-202ENST00000345356 DRC1Q96MC2 740 aa14.03□□□□□ -0.16
COL12A1-202ENST00000345356 FCHSD2O94868 740 aa14.03□□□□□ -0.16
COL12A1-202ENST00000345356 TSC1Q92574 1164 aa14.03□□□□□ -0.16
COL12A1-202ENST00000345356 GOLGA1Q92805 767 aa14.03□□□□□ -0.16
COL12A1-202ENST00000345356 CTAGE15A4D2H0 777 aa14.02□□□□□ -0.16
COL12A1-202ENST00000345356 CTAGE8P0CG41 777 aa14.02□□□□□ -0.16
COL12A1-202ENST00000345356 DNA2P51530 1060 aa14.02□□□□□ -0.16
COL12A1-202ENST00000345356 SYT10Q6XYQ8 523 aa14.02□□□□□ -0.16
COL12A1-202ENST00000345356 CTAGE6Q86UF2 777 aa14.02□□□□□ -0.16
COL12A1-202ENST00000345356 CTAGE4Q8IX94 777 aa14.02□□□□□ -0.16
COL12A1-202ENST00000345356 PHACTR2O75167 634 aa14.02□□□□□ -0.16
COL12A1-202ENST00000345356 EZRP15311 586 aaKnown RBP14.02□□□□□ -0.16
COL12A1-202ENST00000345356 TYRO3Q06418 890 aa14.02□□□□□ -0.16
COL12A1-202ENST00000345356 NFE2L2Q16236 605 aa14.02□□□□□ -0.16
COL12A1-202ENST00000345356 ISM2Q6H9L7 571 aa14.02□□□□□ -0.16
COL12A1-202ENST00000345356 KIF1BPQ96EK5 621 aa14.02□□□□□ -0.16
COL12A1-202ENST00000345356 DACT1Q9NYF0 836 aa14.02□□□□□ -0.16
COL12A1-202ENST00000345356 YEATS4O95619 227 aa14.02□□□□□ -0.17
COL12A1-202ENST00000345356 MAATS1Q7Z4T9 603 aa14.02□□□□□ -0.17
COL12A1-202ENST00000345356 CCDC43Q96MW1 224 aaKnown RBP14.02□□□□□ -0.17
COL12A1-202ENST00000345356 EID1Q9Y6B2 187 aa14.02□□□□□ -0.17
COL12A1-202ENST00000345356 ZGPATQ8N5A5 531 aaKnown RBP14.02□□□□□ -0.17
COL12A1-202ENST00000345356 CNNM3Q8NE01 707 aa14.02□□□□□ -0.17
COL12A1-202ENST00000345356 G3V3G9 751 aa14.01□□□□□ -0.17
COL12A1-202ENST00000345356 DCAF8Q5TAQ9 597 aa14.01□□□□□ -0.17
COL12A1-202ENST00000345356 C8orf76Q96K31 380 aa14.01□□□□□ -0.17
COL12A1-202ENST00000345356 SPG7Q9UQ90 795 aa14.01□□□□□ -0.17
COL12A1-202ENST00000345356 KRT18P05783 430 aaKnown RBP14.01□□□□□ -0.17
COL12A1-202ENST00000345356 DMTNQ08495 405 aa14.01□□□□□ -0.17
COL12A1-202ENST00000345356 NUP133Q8WUM0 1156 aa14.01□□□□□ -0.17
COL12A1-202ENST00000345356 HSF2BPO75031 334 aa14.01□□□□□ -0.17
COL12A1-202ENST00000345356 HLTFQ14527 1009 aaKnown RBP eCLIP14.01□□□□□ -0.17
COL12A1-202ENST00000345356 SMC1AQ14683 1233 aaKnown RBP14.01□□□□□ -0.17
COL12A1-202ENST00000345356 SPECC1Q5M775 1068 aa14.01□□□□□ -0.17
COL12A1-202ENST00000345356 TTC39AQ5SRH9 613 aa14.01□□□□□ -0.17
COL12A1-202ENST00000345356 BCL2L12Q9HB09 334 aa14.01□□□□□ -0.17
COL12A1-202ENST00000345356 NSD3Q9BZ95 1437 aa14.01□□□□□ -0.17
COL12A1-202ENST00000345356 ZNF445P59923 1031 aa14.01□□□□□ -0.17
COL12A1-202ENST00000345356 UBASH3AP57075 661 aa14□□□□□ -0.17
COL12A1-202ENST00000345356 OTUD6BQ8N6M0 293 aa14□□□□□ -0.17
COL12A1-202ENST00000345356 USO1O60763 962 aaKnown RBP14□□□□□ -0.17
COL12A1-202ENST00000345356 CCDC158Q5M9N0 1113 aa14□□□□□ -0.17
COL12A1-202ENST00000345356 TMX4Q9H1E5 349 aaPredicted RBP14□□□□□ -0.17
COL12A1-202ENST00000345356 PDS5BQ9NTI5 1447 aa14□□□□□ -0.17
COL12A1-202ENST00000345356 ATAD2BQ9ULI0 1458 aa14□□□□□ -0.17
COL12A1-202ENST00000345356 SDSP20132 328 aa14□□□□□ -0.17
COL12A1-202ENST00000345356 ANKRD18AQ8IVF6 992 aa14□□□□□ -0.17
COL12A1-202ENST00000345356 CTNNA3Q9UI47 895 aa14□□□□□ -0.17
COL12A1-202ENST00000345356 DNM1Q05193 864 aaKnown RBP14□□□□□ -0.17
COL12A1-202ENST00000345356 MATR3P43243 847 aaKnown RBP eCLIP14□□□□□ -0.17
COL12A1-202ENST00000345356 AOPEPQ8N6M6 819 aa14□□□□□ -0.17
COL12A1-202ENST00000345356 F13A1P00488 732 aa13.99□□□□□ -0.17
COL12A1-202ENST00000345356 SYT1P21579 422 aa13.99□□□□□ -0.17
COL12A1-202ENST00000345356 CCDC178Q5BJE1 867 aa13.99□□□□□ -0.17
COL12A1-202ENST00000345356 ATRIPQ8WXE1 791 aa13.99□□□□□ -0.17
COL12A1-202ENST00000345356 CEP131Q9UPN4 1083 aa13.99□□□□□ -0.17
COL12A1-202ENST00000345356 SPECC1LQ69YQ0 1117 aa13.99□□□□□ -0.17
COL12A1-202ENST00000345356 ABCC11Q96J66 1382 aa13.99□□□□□ -0.17
COL12A1-202ENST00000345356 GOPCQ9HD26 462 aa13.99□□□□□ -0.17
COL12A1-202ENST00000345356 JADE2Q9NQC1 790 aa13.99□□□□□ -0.17
COL12A1-202ENST00000345356 CEP112Q8N8E3 955 aa13.99□□□□□ -0.17
COL12A1-202ENST00000345356 TSHZ3Q63HK5 1081 aa13.98□□□□□ -0.17
COL12A1-202ENST00000345356 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.98□□□□□ -0.17
COL12A1-202ENST00000345356 GIGYF2Q6Y7W6 1299 aaKnown RBP13.98□□□□□ -0.17
COL12A1-202ENST00000345356 ZNF526Q8TF50 670 aaPredicted RBP13.98□□□□□ -0.17
COL12A1-202ENST00000345356 NAA15Q9BXJ9 866 aaKnown RBP13.98□□□□□ -0.17
COL12A1-202ENST00000345356 ZNF500O60304 480 aaPredicted RBP13.98□□□□□ -0.17
COL12A1-202ENST00000345356 ELF2Q15723 593 aa13.98□□□□□ -0.17
COL12A1-202ENST00000345356 WASF1Q92558 559 aa13.98□□□□□ -0.17
COL12A1-202ENST00000345356 EHBP1L1Q8N3D4 1523 aa13.98□□□□□ -0.17
COL12A1-202ENST00000345356 SEPT11Q9NVA2 429 aaKnown RBP13.98□□□□□ -0.17
COL12A1-202ENST00000345356 MSL1Q68DK7 614 aa13.97□□□□□ -0.17
COL12A1-202ENST00000345356 ZHX3Q9H4I2 956 aa13.97□□□□□ -0.17
COL12A1-202ENST00000345356 FKBP15Q5T1M5 1219 aa13.97□□□□□ -0.17
COL12A1-202ENST00000345356 FGD5Q6ZNL6 1462 aa13.97□□□□□ -0.17
COL12A1-202ENST00000345356 PRXQ9BXM0 1461 aa13.97□□□□□ -0.17
COL12A1-202ENST00000345356 NECAB1Q8N987 351 aa13.97□□□□□ -0.17
COL12A1-202ENST00000345356 SCLT1Q96NL6 688 aa13.97□□□□□ -0.17
COL12A1-202ENST00000345356 GCOM1H8Y6P7 765 aaPredicted RBP13.97□□□□□ -0.17
COL12A1-202ENST00000345356 MYZAPP0CAP1 466 aa13.97□□□□□ -0.17
COL12A1-202ENST00000345356 FKBP4Q02790 459 aaKnown RBP eCLIP13.97□□□□□ -0.17
COL12A1-202ENST00000345356 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.97□□□□□ -0.17
COL12A1-202ENST00000345356 CCT2P78371 535 aaKnown RBP13.96□□□□□ -0.17
COL12A1-202ENST00000345356 CKAP4Q07065 602 aaKnown RBP13.96□□□□□ -0.17
COL12A1-202ENST00000345356 ALS2CR12Q96Q35 445 aa13.96□□□□□ -0.17
COL12A1-202ENST00000345356 EVCP57679 992 aa13.96□□□□□ -0.17
COL12A1-202ENST00000345356 UTP14CQ5TAP6 766 aaKnown RBP13.96□□□□□ -0.17
COL12A1-202ENST00000345356 CCDC121Q6ZUS5 278 aa13.96□□□□□ -0.17
COL12A1-202ENST00000345356 PPP1R9BQ96SB3 815 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms