RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 EIF4A1P60842 406 aaKnown RBP23.27■■□□□ 1.32
LYSMD4-202ENST00000344791 CLEC17AQ6ZS10 378 aa23.27■■□□□ 1.32
LYSMD4-202ENST00000344791 CLCN1P35523 988 aa23.25■■□□□ 1.31
LYSMD4-202ENST00000344791 CWC27Q6UX04 472 aaKnown RBP23.25■■□□□ 1.31
LYSMD4-202ENST00000344791 SSH3Q8TE77 659 aa23.25■■□□□ 1.31
LYSMD4-202ENST00000344791 DNAAF4Q8WXU2 420 aa23.25■■□□□ 1.31
LYSMD4-202ENST00000344791 ANP32BQ92688 251 aaKnown RBP23.25■■□□□ 1.31
LYSMD4-202ENST00000344791 NWD1Q149M9 1564 aa23.25■■□□□ 1.31
LYSMD4-202ENST00000344791 TRHP20396 242 aaPredicted RBP23.25■■□□□ 1.31
LYSMD4-202ENST00000344791 PRIM1P49642 420 aaKnown RBP23.25■■□□□ 1.31
LYSMD4-202ENST00000344791 IP6K1Q92551 441 aa23.25■■□□□ 1.31
LYSMD4-202ENST00000344791 SPG7Q9UQ90 795 aa23.25■■□□□ 1.31
LYSMD4-202ENST00000344791 ARHGAP23Q9P227 1491 aa23.24■■□□□ 1.31
LYSMD4-202ENST00000344791 SYCE3A1L190 88 aa23.24■■□□□ 1.31
LYSMD4-202ENST00000344791 SLIT1O75093 1534 aa23.24■■□□□ 1.31
LYSMD4-202ENST00000344791 AIMP1Q12904 312 aaKnown RBP23.23■■□□□ 1.31
LYSMD4-202ENST00000344791 PA2G4Q9UQ80 394 aaKnown RBP23.23■■□□□ 1.31
LYSMD4-202ENST00000344791 PROSER3Q2NL68 480 aa23.23■■□□□ 1.31
LYSMD4-202ENST00000344791 DDX54Q8TDD1 881 aaKnown RBP23.23■■□□□ 1.31
LYSMD4-202ENST00000344791 CPA1P15085 419 aa23.23■■□□□ 1.31
LYSMD4-202ENST00000344791 CWF19L2Q2TBE0 894 aaKnown RBP23.23■■□□□ 1.31
LYSMD4-202ENST00000344791 ORAI2Q96SN7 254 aa23.23■■□□□ 1.31
LYSMD4-202ENST00000344791 FAM208AQ9UK61 1670 aaKnown RBP23.22■■□□□ 1.31
LYSMD4-202ENST00000344791 RBSNQ9H1K0 784 aa23.22■■□□□ 1.31
LYSMD4-202ENST00000344791 STAP2Q9UGK3 403 aa23.22■■□□□ 1.31
LYSMD4-202ENST00000344791 RNF214Q8ND24 703 aa23.22■■□□□ 1.31
LYSMD4-202ENST00000344791 TMEM63CQ9P1W3 806 aa23.22■■□□□ 1.31
LYSMD4-202ENST00000344791 BEND3Q5T5X7 828 aa23.21■■□□□ 1.31
LYSMD4-202ENST00000344791 C9orf78Q9NZ63 289 aaPredicted RBP23.21■■□□□ 1.31
LYSMD4-202ENST00000344791 PI4K2BQ8TCG2 481 aa23.2■■□□□ 1.3
LYSMD4-202ENST00000344791 XRN1Q8IZH2 1706 aaKnown RBP23.2■■□□□ 1.3
LYSMD4-202ENST00000344791 MAP3K2Q9Y2U5 619 aa23.2■■□□□ 1.3
LYSMD4-202ENST00000344791 KIF1BPQ96EK5 621 aa23.19■■□□□ 1.3
LYSMD4-202ENST00000344791 C1orf141Q5JVX7 400 aa23.19■■□□□ 1.3
LYSMD4-202ENST00000344791 ANKARQ7Z5J8 1434 aa23.18■■□□□ 1.3
LYSMD4-202ENST00000344791 CCDC173Q0VFZ6 552 aa23.17■■□□□ 1.3
LYSMD4-202ENST00000344791 POLA2Q14181 598 aa23.17■■□□□ 1.3
LYSMD4-202ENST00000344791 RASEFQ8IZ41 740 aa23.17■■□□□ 1.3
LYSMD4-202ENST00000344791 CEMIPQ8WUJ3 1361 aa23.16■■□□□ 1.3
LYSMD4-202ENST00000344791 RAB11FIP3O75154 756 aa23.16■■□□□ 1.3
LYSMD4-202ENST00000344791 ZNF445P59923 1031 aa23.16■■□□□ 1.3
LYSMD4-202ENST00000344791 LRRC37A3O60309 1634 aa23.16■■□□□ 1.3
LYSMD4-202ENST00000344791 GCP02774 474 aa23.15■■□□□ 1.3
LYSMD4-202ENST00000344791 MCM2P49736 904 aa23.15■■□□□ 1.3
LYSMD4-202ENST00000344791 PLEKHO1Q53GL0 409 aaPredicted RBP23.15■■□□□ 1.3
LYSMD4-202ENST00000344791 CNTROBQ8N137 903 aa23.15■■□□□ 1.3
LYSMD4-202ENST00000344791 BRD1O95696 1058 aa23.15■■□□□ 1.3
LYSMD4-202ENST00000344791 KIAA1211Q6ZU35 1233 aa23.15■■□□□ 1.3
LYSMD4-202ENST00000344791 ANKLE2Q86XL3 938 aa23.15■■□□□ 1.3
LYSMD4-202ENST00000344791 SIL1Q9H173 461 aa23.15■■□□□ 1.3
LYSMD4-202ENST00000344791 ADCY9O60503 1353 aa23.14■■□□□ 1.3
LYSMD4-202ENST00000344791 SGSM2O43147 1006 aa23.14■■□□□ 1.29
LYSMD4-202ENST00000344791 HSPA4P34932 840 aa23.14■■□□□ 1.29
LYSMD4-202ENST00000344791 ANAPC15P60006 121 aa23.14■■□□□ 1.29
LYSMD4-202ENST00000344791 AKAP4Q5JQC9 854 aa23.14■■□□□ 1.29
LYSMD4-202ENST00000344791 BABAM1Q9NWV8 329 aa23.14■■□□□ 1.29
LYSMD4-202ENST00000344791 ZC3H6P61129 1189 aaKnown RBP23.14■■□□□ 1.29
LYSMD4-202ENST00000344791 SLC39A6Q13433 755 aa23.14■■□□□ 1.29
LYSMD4-202ENST00000344791 CUL4AQ13619 759 aa23.14■■□□□ 1.29
LYSMD4-202ENST00000344791 GADD45BO75293 160 aaPredicted RBP23.13■■□□□ 1.29
LYSMD4-202ENST00000344791 PIP4K2AP48426 406 aaPredicted RBP23.13■■□□□ 1.29
LYSMD4-202ENST00000344791 ANKRD24Q8TF21 1146 aa23.13■■□□□ 1.29
LYSMD4-202ENST00000344791 DIAPH3Q9NSV4 1193 aa23.13■■□□□ 1.29
LYSMD4-202ENST00000344791 AXIN2Q9Y2T1 843 aa23.13■■□□□ 1.29
LYSMD4-202ENST00000344791 SNX14Q9Y5W7 946 aa23.13■■□□□ 1.29
LYSMD4-202ENST00000344791 FER1L4A9Z1Z3 1794 aa23.13■■□□□ 1.29
LYSMD4-202ENST00000344791 DBF4Q9UBU7 674 aaPredicted RBP23.13■■□□□ 1.29
LYSMD4-202ENST00000344791 MARF1Q9Y4F3 1742 aaKnown RBP23.13■■□□□ 1.29
LYSMD4-202ENST00000344791 RNMTO43148 476 aaKnown RBP23.12■■□□□ 1.29
LYSMD4-202ENST00000344791 CLASRPQ8N2M8 674 aaKnown RBP23.12■■□□□ 1.29
LYSMD4-202ENST00000344791 MYL6BP14649 208 aa23.12■■□□□ 1.29
LYSMD4-202ENST00000344791 JARID2Q92833 1246 aaPredicted RBP23.12■■□□□ 1.29
LYSMD4-202ENST00000344791 LTN1O94822 1766 aa23.11■■□□□ 1.29
LYSMD4-202ENST00000344791 AK2P54819 239 aa23.11■■□□□ 1.29
LYSMD4-202ENST00000344791 KLHDC4Q8TBB5 520 aa23.11■■□□□ 1.29
LYSMD4-202ENST00000344791 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.11■■□□□ 1.29
LYSMD4-202ENST00000344791 CASTP20810 708 aaKnown RBP23.11■■□□□ 1.29
LYSMD4-202ENST00000344791 KCNH5Q8NCM2 988 aa23.11■■□□□ 1.29
LYSMD4-202ENST00000344791 PXDNQ92626 1479 aa23.11■■□□□ 1.29
LYSMD4-202ENST00000344791 IFIT2P09913 472 aaKnown RBP23.11■■□□□ 1.29
LYSMD4-202ENST00000344791 CCDC8Q9H0W5 538 aaPredicted RBP23.11■■□□□ 1.29
LYSMD4-202ENST00000344791 RAD50Q92878 1312 aa23.1■■□□□ 1.29
LYSMD4-202ENST00000344791 AACSQ86V21 672 aa23.1■■□□□ 1.29
LYSMD4-202ENST00000344791 PTH1RQ03431 593 aa23.1■■□□□ 1.29
LYSMD4-202ENST00000344791 LSG1Q9H089 658 aaKnown RBP23.1■■□□□ 1.29
LYSMD4-202ENST00000344791 GIGYF1O75420 1035 aaPredicted RBP23.09■■□□□ 1.29
LYSMD4-202ENST00000344791 MPNDQ8N594 471 aa23.09■■□□□ 1.29
LYSMD4-202ENST00000344791 MSNP26038 577 aaKnown RBP23.09■■□□□ 1.29
LYSMD4-202ENST00000344791 PRPF40BQ6NWY9 871 aaKnown RBP23.09■■□□□ 1.29
LYSMD4-202ENST00000344791 PPP1R9BQ96SB3 815 aa23.09■■□□□ 1.29
LYSMD4-202ENST00000344791 RGPD2P0DJD1 1756 aa23.09■■□□□ 1.29
LYSMD4-202ENST00000344791 PXDNLA1KZ92 1463 aa23.09■■□□□ 1.29
LYSMD4-202ENST00000344791 ADCK5Q3MIX3 580 aa23.08■■□□□ 1.29
LYSMD4-202ENST00000344791 AOX1Q06278 1338 aa23.08■■□□□ 1.29
LYSMD4-202ENST00000344791 LARGE1O95461 756 aa23.07■■□□□ 1.28
LYSMD4-202ENST00000344791 LRSAM1Q6UWE0 723 aa23.07■■□□□ 1.28
LYSMD4-202ENST00000344791 USP48Q86UV5 1035 aa23.07■■□□□ 1.28
LYSMD4-202ENST00000344791 INTS4Q96HW7 963 aaKnown RBP23.07■■□□□ 1.28
LYSMD4-202ENST00000344791 KCNJ4P48050 445 aa23.07■■□□□ 1.28
LYSMD4-202ENST00000344791 DDX17Q92841 729 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms