RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 FTSJ3Q8IY81 847 aaKnown RBP12.35□□□□□ -0.43
CLDN18-202ENST00000343735 BCL9O00512 1426 aa12.35□□□□□ -0.43
CLDN18-202ENST00000343735 KCNQ3O43525 872 aa12.35□□□□□ -0.43
CLDN18-202ENST00000343735 SLC39A6Q13433 755 aa12.35□□□□□ -0.43
CLDN18-202ENST00000343735 KRT24Q2M2I5 525 aa12.35□□□□□ -0.43
CLDN18-202ENST00000343735 SEPT12Q8IYM1 358 aa12.35□□□□□ -0.43
CLDN18-202ENST00000343735 VSIG10Q8N0Z9 540 aa12.35□□□□□ -0.43
CLDN18-202ENST00000343735 NOB1Q9ULX3 412 aaKnown RBP12.35□□□□□ -0.43
CLDN18-202ENST00000343735 SLC4A2P04920 1241 aa12.34□□□□□ -0.43
CLDN18-202ENST00000343735 PIGBQ92521 554 aa12.34□□□□□ -0.43
CLDN18-202ENST00000343735 SMARCC1Q92922 1105 aaPredicted RBP12.34□□□□□ -0.43
CLDN18-202ENST00000343735 DBF4Q9UBU7 674 aaPredicted RBP12.34□□□□□ -0.43
CLDN18-202ENST00000343735 APBB1O00213 710 aa12.34□□□□□ -0.43
CLDN18-202ENST00000343735 DZIP1LQ8IYY4 767 aaKnown RBP12.34□□□□□ -0.43
CLDN18-202ENST00000343735 SYTL4Q96C24 671 aaPredicted RBP12.34□□□□□ -0.43
CLDN18-202ENST00000343735 PRIM1P49642 420 aaKnown RBP12.34□□□□□ -0.43
CLDN18-202ENST00000343735 PDE4AP27815 886 aa12.33□□□□□ -0.44
CLDN18-202ENST00000343735 ZNF496Q96IT1 587 aaPredicted RBP12.33□□□□□ -0.44
CLDN18-202ENST00000343735 ERBB4Q15303 1308 aa12.33□□□□□ -0.44
CLDN18-202ENST00000343735 EIF2S2P20042 333 aaKnown RBP12.33□□□□□ -0.44
CLDN18-202ENST00000343735 HYPKQ9NX55 129 aa12.33□□□□□ -0.44
CLDN18-202ENST00000343735 RXRBP28702 533 aa12.32□□□□□ -0.44
CLDN18-202ENST00000343735 TOGARAM1Q9Y4F4 1720 aa12.32□□□□□ -0.44
CLDN18-202ENST00000343735 PAPPAQ13219 1627 aa12.32□□□□□ -0.44
CLDN18-202ENST00000343735 HMGB2P26583 209 aaKnown RBP12.31□□□□□ -0.44
CLDN18-202ENST00000343735 ATG3Q9NT62 314 aa12.31□□□□□ -0.44
CLDN18-202ENST00000343735 TRIM27P14373 513 aa12.31□□□□□ -0.44
CLDN18-202ENST00000343735 CACNA1FO60840 1977 aa12.3□□□□□ -0.44
CLDN18-202ENST00000343735 FAM196AQ6ZSG2 479 aa12.3□□□□□ -0.44
CLDN18-202ENST00000343735 KRT27Q7Z3Y8 459 aa12.3□□□□□ -0.44
CLDN18-202ENST00000343735 DDX21Q9NR30 783 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLDN18-202ENST00000343735 STARD3NLO95772 234 aa12.3□□□□□ -0.44
CLDN18-202ENST00000343735 DDX19BQ9UMR2 479 aa12.3□□□□□ -0.44
CLDN18-202ENST00000343735 DOT1LQ8TEK3 1739 aa12.3□□□□□ -0.44
CLDN18-202ENST00000343735 ITGB4P16144 1822 aa12.3□□□□□ -0.44
CLDN18-202ENST00000343735 DDX58O95786 925 aaKnown RBP12.3□□□□□ -0.44
CLDN18-202ENST00000343735 ACSBG1Q96GR2 724 aa12.3□□□□□ -0.44
CLDN18-202ENST00000343735 BRPF3Q9ULD4 1205 aa12.3□□□□□ -0.44
CLDN18-202ENST00000343735 ASAP1Q9ULH1 1129 aa12.3□□□□□ -0.44
CLDN18-202ENST00000343735 UBR2Q8IWV8 1755 aa12.3□□□□□ -0.44
CLDN18-202ENST00000343735 PTCD1O75127 700 aaKnown RBP12.29□□□□□ -0.44
CLDN18-202ENST00000343735 FLIIQ13045 1269 aa12.29□□□□□ -0.44
CLDN18-202ENST00000343735 NECTIN2Q92692 538 aa12.29□□□□□ -0.44
CLDN18-202ENST00000343735 KCPQ6ZWJ8 1503 aa12.29□□□□□ -0.44
CLDN18-202ENST00000343735 RBM42Q9BTD8 480 aaKnown RBP12.29□□□□□ -0.44
CLDN18-202ENST00000343735 MVPQ14764 893 aaKnown RBP12.28□□□□□ -0.44
CLDN18-202ENST00000343735 IPO9Q96P70 1041 aaKnown RBP12.28□□□□□ -0.44
CLDN18-202ENST00000343735 CHPF2Q9P2E5 772 aa12.28□□□□□ -0.44
CLDN18-202ENST00000343735 FKBP5Q13451 457 aaPredicted RBP12.28□□□□□ -0.44
CLDN18-202ENST00000343735 C1orf115Q9H7X2 142 aa12.28□□□□□ -0.44
CLDN18-202ENST00000343735 CCT4P50991 539 aaKnown RBP12.27□□□□□ -0.44
CLDN18-202ENST00000343735 ABCC4O15439 1325 aa12.27□□□□□ -0.44
CLDN18-202ENST00000343735 USP16Q9Y5T5 823 aa12.27□□□□□ -0.45
CLDN18-202ENST00000343735 ITPRIPQ8IWB1 547 aa12.27□□□□□ -0.45
CLDN18-202ENST00000343735 LAMB4A4D0S4 1761 aa12.26□□□□□ -0.45
CLDN18-202ENST00000343735 IGHDP01880 384 aa12.26□□□□□ -0.45
CLDN18-202ENST00000343735 BCL11BQ9C0K0 894 aaPredicted RBP12.26□□□□□ -0.45
CLDN18-202ENST00000343735 RLBP1P12271 317 aa12.26□□□□□ -0.45
CLDN18-202ENST00000343735 INTS3Q68E01 1043 aaKnown RBP12.26□□□□□ -0.45
CLDN18-202ENST00000343735 PALLDQ8WX93 1383 aa12.25□□□□□ -0.45
CLDN18-202ENST00000343735 PRAMEF22A3QJZ6 481 aa12.25□□□□□ -0.45
CLDN18-202ENST00000343735 NHSQ6T4R5 1651 aa12.25□□□□□ -0.45
CLDN18-202ENST00000343735 TMEM57Q8N5G2 664 aa12.25□□□□□ -0.45
CLDN18-202ENST00000343735 PXDNLA1KZ92 1463 aa12.24□□□□□ -0.45
CLDN18-202ENST00000343735 LOC102724428A0A0B4J2F2 783 aa12.24□□□□□ -0.45
CLDN18-202ENST00000343735 SIK1P57059 783 aa12.24□□□□□ -0.45
CLDN18-202ENST00000343735 G2E3Q7L622 706 aa12.24□□□□□ -0.45
CLDN18-202ENST00000343735 KCNQ2O43526 872 aa12.24□□□□□ -0.45
CLDN18-202ENST00000343735 ATP6V1AP38606 617 aa12.24□□□□□ -0.45
CLDN18-202ENST00000343735 PDIA6Q15084 440 aa12.24□□□□□ -0.45
CLDN18-202ENST00000343735 KSR2Q6VAB6 950 aa12.24□□□□□ -0.45
CLDN18-202ENST00000343735 SLKQ9H2G2 1235 aaPredicted RBP12.24□□□□□ -0.45
CLDN18-202ENST00000343735 PHAXQ9H814 394 aaKnown RBP12.24□□□□□ -0.45
CLDN18-202ENST00000343735 C5P01031 1676 aa12.24□□□□□ -0.45
CLDN18-202ENST00000343735 DNAJC10Q8IXB1 793 aa12.23□□□□□ -0.45
CLDN18-202ENST00000343735 HDAC5Q9UQL6 1122 aa12.23□□□□□ -0.45
CLDN18-202ENST00000343735 MYL6BP14649 208 aa12.23□□□□□ -0.45
CLDN18-202ENST00000343735 ZNF831Q5JPB2 1677 aa12.23□□□□□ -0.45
CLDN18-202ENST00000343735 DNAAF4Q8WXU2 420 aa12.23□□□□□ -0.45
CLDN18-202ENST00000343735 TAOK2Q9UL54 1235 aa12.23□□□□□ -0.45
CLDN18-202ENST00000343735 KAT6BQ8WYB5 2073 aa12.22□□□□□ -0.45
CLDN18-202ENST00000343735 CYP19A1P11511 503 aaPredicted RBP12.22□□□□□ -0.45
CLDN18-202ENST00000343735 NEXNQ0ZGT2 675 aa12.22□□□□□ -0.45
CLDN18-202ENST00000343735 SLC4A10Q6U841 1118 aa12.22□□□□□ -0.45
CLDN18-202ENST00000343735 RGS17Q9UGC6 210 aaPredicted RBP12.22□□□□□ -0.45
CLDN18-202ENST00000343735 RIC3Q7Z5B4 369 aa12.22□□□□□ -0.45
CLDN18-202ENST00000343735 CICQ96RK0 1608 aaPredicted RBP12.21□□□□□ -0.45
CLDN18-202ENST00000343735 RGS12O14924 1447 aa12.21□□□□□ -0.45
CLDN18-202ENST00000343735 ANKRD13DQ6ZTN6 518 aa12.21□□□□□ -0.45
CLDN18-202ENST00000343735 COPS6Q7L5N1 327 aa12.21□□□□□ -0.45
CLDN18-202ENST00000343735 PI4KAP2A4QPH2 592 aa12.21□□□□□ -0.45
CLDN18-202ENST00000343735 PI4KAP1Q8N8J0 262 aa12.21□□□□□ -0.45
CLDN18-202ENST00000343735 XAGE3Q8WTP9 111 aa12.21□□□□□ -0.45
CLDN18-202ENST00000343735 SRCIN1Q9C0H9 1055 aa12.21□□□□□ -0.45
CLDN18-202ENST00000343735 ALDH1L1O75891 902 aa12.21□□□□□ -0.46
CLDN18-202ENST00000343735 IL6STP40189 918 aaPredicted RBP12.21□□□□□ -0.46
CLDN18-202ENST00000343735 PROSER3Q2NL68 480 aa12.21□□□□□ -0.46
CLDN18-202ENST00000343735 POTEAQ6S8J7 498 aa12.21□□□□□ -0.46
CLDN18-202ENST00000343735 PLBD2Q8NHP8 589 aa12.21□□□□□ -0.46
CLDN18-202ENST00000343735 IBTKQ9P2D0 1353 aaPredicted RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms