RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 FKBP5Q13451 457 aaPredicted RBP18.25■□□□□ 0.51
PBX3-201ENST00000342287 NKX1-1Q15270 411 aaPredicted RBP18.25■□□□□ 0.51
PBX3-201ENST00000342287 SKAP1Q86WV1 359 aa18.25■□□□□ 0.51
PBX3-201ENST00000342287 CCT4P50991 539 aaKnown RBP18.25■□□□□ 0.51
PBX3-201ENST00000342287 MRC1P22897 1456 aa18.24■□□□□ 0.51
PBX3-201ENST00000342287 ADAMTS2O95450 1211 aa18.24■□□□□ 0.51
PBX3-201ENST00000342287 SLC39A6Q13433 755 aa18.24■□□□□ 0.51
PBX3-201ENST00000342287 DDX54Q8TDD1 881 aaKnown RBP18.24■□□□□ 0.51
PBX3-201ENST00000342287 F6X3S4 739 aa18.23■□□□□ 0.51
PBX3-201ENST00000342287 ERVV-2B6SEH9 535 aa18.23■□□□□ 0.51
PBX3-201ENST00000342287 SLC4A10Q6U841 1118 aa18.23■□□□□ 0.51
PBX3-201ENST00000342287 CHPF2Q9P2E5 772 aa18.23■□□□□ 0.51
PBX3-201ENST00000342287 ZHX1Q9UKY1 873 aaPredicted RBP18.23■□□□□ 0.51
PBX3-201ENST00000342287 TTC5Q8N0Z6 440 aa18.22■□□□□ 0.51
PBX3-201ENST00000342287 DBF4Q9UBU7 674 aaPredicted RBP18.22■□□□□ 0.51
PBX3-201ENST00000342287 CACNA1FO60840 1977 aa18.22■□□□□ 0.51
PBX3-201ENST00000342287 PHAXQ9H814 394 aaKnown RBP18.21■□□□□ 0.51
PBX3-201ENST00000342287 NUTM2BA6NNL0 878 aaPredicted RBP18.21■□□□□ 0.51
PBX3-201ENST00000342287 NUTM2EB1AL46 878 aaPredicted RBP18.21■□□□□ 0.51
PBX3-201ENST00000342287 NUTM2AQ8IVF1 878 aaPredicted RBP18.21■□□□□ 0.51
PBX3-201ENST00000342287 PANK2Q9BZ23 570 aa18.21■□□□□ 0.51
PBX3-201ENST00000342287 TPM2P07951 284 aa18.2■□□□□ 0.5
PBX3-201ENST00000342287 XRCC6P12956 609 aaKnown RBP eCLIP18.2■□□□□ 0.5
PBX3-201ENST00000342287 C1orf115Q9H7X2 142 aa18.2■□□□□ 0.5
PBX3-201ENST00000342287 PRAMEF22A3QJZ6 481 aa18.19■□□□□ 0.5
PBX3-201ENST00000342287 SMC5Q8IY18 1101 aa18.19■□□□□ 0.5
PBX3-201ENST00000342287 ZNF496Q96IT1 587 aaPredicted RBP18.19■□□□□ 0.5
PBX3-201ENST00000342287 PDZRN3Q9UPQ7 1066 aa18.19■□□□□ 0.5
PBX3-201ENST00000342287 FMNL2Q96PY5 1086 aa18.19■□□□□ 0.5
PBX3-201ENST00000342287 SNRPA1P09661 255 aaKnown RBP18.18■□□□□ 0.5
PBX3-201ENST00000342287 DISP2A7MBM2 1401 aa18.17■□□□□ 0.5
PBX3-201ENST00000342287 MEIS3Q99687 375 aa18.17■□□□□ 0.5
PBX3-201ENST00000342287 HYPKQ9NX55 129 aa18.17■□□□□ 0.5
PBX3-201ENST00000342287 CERKQ8TCT0 537 aa18.16■□□□□ 0.5
PBX3-201ENST00000342287 SIRT2Q8IXJ6 389 aa18.16■□□□□ 0.5
PBX3-201ENST00000342287 RPAP2Q8IXW5 612 aaPredicted RBP18.16■□□□□ 0.5
PBX3-201ENST00000342287 DDX21Q9NR30 783 aaKnown RBP eCLIP18.16■□□□□ 0.5
PBX3-201ENST00000342287 PXDNLA1KZ92 1463 aa18.15■□□□□ 0.5
PBX3-201ENST00000342287 EXOC5O00471 708 aa18.15■□□□□ 0.5
PBX3-201ENST00000342287 ANXA1P04083 346 aa18.15■□□□□ 0.5
PBX3-201ENST00000342287 CDCA7Q9BWT1 371 aaPredicted RBP18.15■□□□□ 0.5
PBX3-201ENST00000342287 THRAP3Q9Y2W1 955 aaKnown RBP18.15■□□□□ 0.5
PBX3-201ENST00000342287 GCC1Q96CN9 775 aa18.15■□□□□ 0.5
PBX3-201ENST00000342287 SHANK3Q9BYB0 1731 aa18.15■□□□□ 0.5
PBX3-201ENST00000342287 JCADQ9P266 1359 aa18.15■□□□□ 0.5
PBX3-201ENST00000342287 PLCH1Q4KWH8 1693 aa18.14■□□□□ 0.5
PBX3-201ENST00000342287 GOLGA6L3A6NEY3 463 aa18.14■□□□□ 0.5
PBX3-201ENST00000342287 SPATA31A1Q5TZJ5 1347 aa18.14■□□□□ 0.49
PBX3-201ENST00000342287 ARID3AQ99856 593 aa18.14■□□□□ 0.49
PBX3-201ENST00000342287 PI4KAP2A4QPH2 592 aa18.13■□□□□ 0.49
PBX3-201ENST00000342287 GNAI3P08754 354 aa18.13■□□□□ 0.49
PBX3-201ENST00000342287 PROSER3Q2NL68 480 aa18.13■□□□□ 0.49
PBX3-201ENST00000342287 ANKRD44Q8N8A2 993 aa18.13■□□□□ 0.49
PBX3-201ENST00000342287 PI4KAP1Q8N8J0 262 aa18.13■□□□□ 0.49
PBX3-201ENST00000342287 IPO4Q8TEX9 1081 aaKnown RBP18.13■□□□□ 0.49
PBX3-201ENST00000342287 DNAAF4Q8WXU2 420 aa18.13■□□□□ 0.49
PBX3-201ENST00000342287 ESPNB1AK53 854 aa18.13■□□□□ 0.49
PBX3-201ENST00000342287 PDIA6Q15084 440 aa18.13■□□□□ 0.49
PBX3-201ENST00000342287 SRCIN1Q9C0H9 1055 aa18.13■□□□□ 0.49
PBX3-201ENST00000342287 TMOD3Q9NYL9 352 aa18.12■□□□□ 0.49
PBX3-201ENST00000342287 USP16Q9Y5T5 823 aa18.12■□□□□ 0.49
PBX3-201ENST00000342287 GNAI2P04899 355 aa18.12■□□□□ 0.49
PBX3-201ENST00000342287 NUCB1Q02818 461 aa18.12■□□□□ 0.49
PBX3-201ENST00000342287 CEP85Q6P2H3 762 aa18.12■□□□□ 0.49
PBX3-201ENST00000342287 SLIT2O94813 1529 aa18.11■□□□□ 0.49
PBX3-201ENST00000342287 KSR2Q6VAB6 950 aa18.11■□□□□ 0.49
PBX3-201ENST00000342287 DDX58O95786 925 aaKnown RBP18.11■□□□□ 0.49
PBX3-201ENST00000342287 SPATA31A5Q5VU36 1347 aa18.1■□□□□ 0.49
PBX3-201ENST00000342287 SPATA31A7Q8IWB4 1347 aa18.1■□□□□ 0.49
PBX3-201ENST00000342287 ATP10DQ9P241 1426 aa18.1■□□□□ 0.49
PBX3-201ENST00000342287 BEND3Q5T5X7 828 aa18.1■□□□□ 0.49
PBX3-201ENST00000342287 PRDM10Q9NQV6 1147 aa18.1■□□□□ 0.49
PBX3-201ENST00000342287 ADCY9O60503 1353 aa18.1■□□□□ 0.49
PBX3-201ENST00000342287 NRAPQ86VF7 1730 aa18.1■□□□□ 0.49
PBX3-201ENST00000342287 KIAA1211Q6ZU35 1233 aa18.1■□□□□ 0.49
PBX3-201ENST00000342287 USP44Q9H0E7 712 aa18.1■□□□□ 0.49
PBX3-201ENST00000342287 FAM161AQ3B820 660 aa18.09■□□□□ 0.49
PBX3-201ENST00000342287 GZF1Q9H116 711 aaPredicted RBP18.09■□□□□ 0.49
PBX3-201ENST00000342287 MAP3K2Q9Y2U5 619 aa18.09■□□□□ 0.49
PBX3-201ENST00000342287 DCTPP1Q9H773 170 aa18.09■□□□□ 0.49
PBX3-201ENST00000342287 CCDC9Q9Y3X0 531 aaKnown RBP18.09■□□□□ 0.49
PBX3-201ENST00000342287 ERBB4Q15303 1308 aa18.09■□□□□ 0.49
PBX3-201ENST00000342287 C5P01031 1676 aa18.08■□□□□ 0.49
PBX3-201ENST00000342287 MYL6BP14649 208 aa18.08■□□□□ 0.49
PBX3-201ENST00000342287 CHD1LQ86WJ1 897 aa18.08■□□□□ 0.49
PBX3-201ENST00000342287 UNC5CLQ8IV45 518 aa18.08■□□□□ 0.49
PBX3-201ENST00000342287 NWD2Q9ULI1 1742 aa18.08■□□□□ 0.49
PBX3-201ENST00000342287 HMMRO75330 724 aa18.08■□□□□ 0.48
PBX3-201ENST00000342287 NGLY1Q96IV0 654 aa18.08■□□□□ 0.48
PBX3-201ENST00000342287 FAM13BQ9NYF5 915 aa18.08■□□□□ 0.48
PBX3-201ENST00000342287 AIMP1Q12904 312 aaKnown RBP18.08■□□□□ 0.48
PBX3-201ENST00000342287 ANKRD45Q5TZF3 282 aa18.08■□□□□ 0.48
PBX3-201ENST00000342287 BARGINQ6ZT62 677 aa18.08■□□□□ 0.48
PBX3-201ENST00000342287 PIGBQ92521 554 aa18.08■□□□□ 0.48
PBX3-201ENST00000342287 SPATA31A6Q5VVP1 1343 aa18.07■□□□□ 0.48
PBX3-201ENST00000342287 TNS2Q63HR2 1409 aa18.07■□□□□ 0.48
PBX3-201ENST00000342287 UBTFL1P0CB47 393 aaPredicted RBP18.07■□□□□ 0.48
PBX3-201ENST00000342287 DDB1Q16531 1140 aa18.07■□□□□ 0.48
PBX3-201ENST00000342287 PLCD3Q8N3E9 789 aa18.07■□□□□ 0.48
PBX3-201ENST00000342287 N4BP2Q86UW6 1770 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms