RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 ACEP12821 1306 aa11.28□□□□□ -0.6
TRERF1-201ENST00000340840 STX6O43752 255 aa11.28□□□□□ -0.6
TRERF1-201ENST00000340840 CHMP3Q9Y3E7 222 aa11.28□□□□□ -0.6
TRERF1-201ENST00000340840 CWC27Q6UX04 472 aaKnown RBP11.28□□□□□ -0.6
TRERF1-201ENST00000340840 PDLIM2Q96JY6 352 aa11.28□□□□□ -0.6
TRERF1-201ENST00000340840 CAMSAP1Q5T5Y3 1602 aa11.28□□□□□ -0.6
TRERF1-201ENST00000340840 ARHGEF28Q8N1W1 1705 aaKnown RBP11.28□□□□□ -0.6
TRERF1-201ENST00000340840 KDM4FA0A1W2PPD8 638 aa11.28□□□□□ -0.6
TRERF1-201ENST00000340840 ADCY5O95622 1261 aa11.28□□□□□ -0.6
TRERF1-201ENST00000340840 ZSCAN22P10073 491 aaPredicted RBP11.28□□□□□ -0.6
TRERF1-201ENST00000340840 PRIMPOLQ96LW4 560 aa11.28□□□□□ -0.6
TRERF1-201ENST00000340840 GLRX3O76003 335 aaKnown RBP11.27□□□□□ -0.6
TRERF1-201ENST00000340840 PDIA4P13667 645 aaKnown RBP11.27□□□□□ -0.6
TRERF1-201ENST00000340840 PSMA5P28066 241 aa11.27□□□□□ -0.6
TRERF1-201ENST00000340840 CUL4AQ13619 759 aa11.27□□□□□ -0.6
TRERF1-201ENST00000340840 HCLS1P14317 486 aaPredicted RBP11.27□□□□□ -0.61
TRERF1-201ENST00000340840 CASTP20810 708 aaKnown RBP11.27□□□□□ -0.61
TRERF1-201ENST00000340840 KRT85P78386 507 aa11.27□□□□□ -0.61
TRERF1-201ENST00000340840 MTHFSDQ2M296 383 aaKnown RBP11.27□□□□□ -0.61
TRERF1-201ENST00000340840 PDRG1Q9NUG6 133 aa11.27□□□□□ -0.61
TRERF1-201ENST00000340840 AMOTL2Q9Y2J4 779 aa11.27□□□□□ -0.61
TRERF1-201ENST00000340840 EPB41L2O43491 1005 aaKnown RBP11.27□□□□□ -0.61
TRERF1-201ENST00000340840 ADAMTS2O95450 1211 aa11.27□□□□□ -0.61
TRERF1-201ENST00000340840 SSH2Q76I76 1423 aa11.27□□□□□ -0.61
TRERF1-201ENST00000340840 CHAMP1Q96JM3 812 aa11.27□□□□□ -0.61
TRERF1-201ENST00000340840 JAKMIP1Q96N16 626 aaKnown RBP11.27□□□□□ -0.61
TRERF1-201ENST00000340840 KIF3AQ9Y496 699 aa11.27□□□□□ -0.61
TRERF1-201ENST00000340840 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.27□□□□□ -0.61
TRERF1-201ENST00000340840 ARHGEF40Q8TER5 1519 aa11.27□□□□□ -0.61
TRERF1-201ENST00000340840 TAF7Q15545 349 aaPredicted RBP11.26□□□□□ -0.61
TRERF1-201ENST00000340840 SH2B1Q9NRF2 756 aaPredicted RBP11.26□□□□□ -0.61
TRERF1-201ENST00000340840 ERC1Q8IUD2 1116 aa11.26□□□□□ -0.61
TRERF1-201ENST00000340840 AOX1Q06278 1338 aa11.26□□□□□ -0.61
TRERF1-201ENST00000340840 HIP1O00291 1037 aa11.26□□□□□ -0.61
TRERF1-201ENST00000340840 NRDCO43847 1150 aa11.26□□□□□ -0.61
TRERF1-201ENST00000340840 PPP1R42Q7Z4L9 355 aa11.26□□□□□ -0.61
TRERF1-201ENST00000340840 CCDC83Q8IWF9 413 aa11.26□□□□□ -0.61
TRERF1-201ENST00000340840 FOXO3O43524 673 aa11.25□□□□□ -0.61
TRERF1-201ENST00000340840 G3BP1Q13283 466 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRERF1-201ENST00000340840 NOLC1Q14978 699 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRERF1-201ENST00000340840 NUTM2GQ5VZR2 741 aa11.25□□□□□ -0.61
TRERF1-201ENST00000340840 RHPN1Q8TCX5 695 aa11.25□□□□□ -0.61
TRERF1-201ENST00000340840 BICD2Q8TD16 824 aa11.25□□□□□ -0.61
TRERF1-201ENST00000340840 PALD1Q9ULE6 856 aa11.25□□□□□ -0.61
TRERF1-201ENST00000340840 CNPY2Q9Y2B0 182 aa11.25□□□□□ -0.61
TRERF1-201ENST00000340840 ZDHHC9Q9Y397 364 aa11.25□□□□□ -0.61
TRERF1-201ENST00000340840 SOS1Q07889 1333 aaPredicted RBP11.25□□□□□ -0.61
TRERF1-201ENST00000340840 LARP1BQ659C4 914 aaKnown RBP11.25□□□□□ -0.61
TRERF1-201ENST00000340840 SPC24Q8NBT2 197 aa11.25□□□□□ -0.61
TRERF1-201ENST00000340840 GOLGA6L19H0YKK7 550 aa11.25□□□□□ -0.61
TRERF1-201ENST00000340840 H3BQV1 296 aa11.24□□□□□ -0.61
TRERF1-201ENST00000340840 HSP90B1P14625 803 aaKnown RBP11.24□□□□□ -0.61
TRERF1-201ENST00000340840 IFFO2Q5TF58 517 aa11.24□□□□□ -0.61
TRERF1-201ENST00000340840 CD163L1Q9NR16 1453 aa11.24□□□□□ -0.61
TRERF1-201ENST00000340840 PNMA6EA0A0J9YXQ4 647 aa11.24□□□□□ -0.61
TRERF1-201ENST00000340840 ATP10DQ9P241 1426 aa11.24□□□□□ -0.61
TRERF1-201ENST00000340840 F13A1P00488 732 aa11.24□□□□□ -0.61
TRERF1-201ENST00000340840 NUP62CLQ9H1M0 184 aa11.24□□□□□ -0.61
TRERF1-201ENST00000340840 NAP1L2Q9ULW6 460 aaPredicted RBP11.24□□□□□ -0.61
TRERF1-201ENST00000340840 ALKQ9UM73 1620 aa11.24□□□□□ -0.61
TRERF1-201ENST00000340840 ANKRD1Q15327 319 aa11.24□□□□□ -0.61
TRERF1-201ENST00000340840 MAP3K11Q16584 847 aa11.24□□□□□ -0.61
TRERF1-201ENST00000340840 SPG7Q9UQ90 795 aa11.24□□□□□ -0.61
TRERF1-201ENST00000340840 FLT4P35916 1363 aa11.23□□□□□ -0.61
TRERF1-201ENST00000340840 RGS12O14924 1447 aa11.23□□□□□ -0.61
TRERF1-201ENST00000340840 GADD45BO75293 160 aaPredicted RBP11.23□□□□□ -0.61
TRERF1-201ENST00000340840 PRPF40BQ6NWY9 871 aaKnown RBP11.23□□□□□ -0.61
TRERF1-201ENST00000340840 SIRT1Q96EB6 747 aa11.23□□□□□ -0.61
TRERF1-201ENST00000340840 ZNF830Q96NB3 372 aaPredicted RBP11.23□□□□□ -0.61
TRERF1-201ENST00000340840 LARP6Q9BRS8 491 aaKnown RBP11.23□□□□□ -0.61
TRERF1-201ENST00000340840 TTC12Q9H892 705 aaPredicted RBP11.23□□□□□ -0.61
TRERF1-201ENST00000340840 TTC21AQ8NDW8 1320 aa11.23□□□□□ -0.61
TRERF1-201ENST00000340840 HSPA4P34932 840 aa11.23□□□□□ -0.61
TRERF1-201ENST00000340840 TRIM5Q9C035 493 aa11.23□□□□□ -0.61
TRERF1-201ENST00000340840 STAP2Q9UGK3 403 aa11.23□□□□□ -0.61
TRERF1-201ENST00000340840 NSFL1CQ9UNZ2 370 aaKnown RBP11.23□□□□□ -0.61
TRERF1-201ENST00000340840 GJB2P29033 226 aa11.23□□□□□ -0.61
TRERF1-201ENST00000340840 TNMDQ9H2S6 317 aa11.23□□□□□ -0.61
TRERF1-201ENST00000340840 DDX58O95786 925 aaKnown RBP11.22□□□□□ -0.61
TRERF1-201ENST00000340840 SYT1P21579 422 aa11.22□□□□□ -0.61
TRERF1-201ENST00000340840 AK2P54819 239 aa11.22□□□□□ -0.61
TRERF1-201ENST00000340840 GIMAP6Q6P9H5 292 aa11.22□□□□□ -0.61
TRERF1-201ENST00000340840 NGLY1Q96IV0 654 aa11.22□□□□□ -0.61
TRERF1-201ENST00000340840 MAP3K19Q56UN5 1328 aa11.22□□□□□ -0.61
TRERF1-201ENST00000340840 PIK3C2BO00750 1634 aa11.22□□□□□ -0.61
TRERF1-201ENST00000340840 C1orf141Q5JVX7 400 aa11.22□□□□□ -0.61
TRERF1-201ENST00000340840 CADPS2Q86UW7 1296 aa11.22□□□□□ -0.61
TRERF1-201ENST00000340840 DNAAF4Q8WXU2 420 aa11.22□□□□□ -0.61
TRERF1-201ENST00000340840 PIBF1Q8WXW3 757 aa11.22□□□□□ -0.61
TRERF1-201ENST00000340840 FSD1Q9BTV5 496 aa11.22□□□□□ -0.61
TRERF1-201ENST00000340840 RAD50Q92878 1312 aa11.22□□□□□ -0.61
TRERF1-201ENST00000340840 BECN2A8MW95 431 aa11.22□□□□□ -0.61
TRERF1-201ENST00000340840 BLOC1S2Q6QNY1 142 aa11.22□□□□□ -0.61
TRERF1-201ENST00000340840 SGSM2O43147 1006 aa11.21□□□□□ -0.61
TRERF1-201ENST00000340840 FRMPD1Q5SYB0 1578 aa11.21□□□□□ -0.61
TRERF1-201ENST00000340840 ARHGEF10O15013 1369 aa11.21□□□□□ -0.61
TRERF1-201ENST00000340840 KDM4AO75164 1064 aa11.21□□□□□ -0.61
TRERF1-201ENST00000340840 EYA1Q99502 592 aa11.21□□□□□ -0.61
TRERF1-201ENST00000340840 ECHDC1Q9NTX5 307 aa11.21□□□□□ -0.61
TRERF1-201ENST00000340840 ABTB2Q8N961 1025 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms