RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 DDX21Q9NR30 783 aaKnown RBP eCLIP14.48□□□□□ -0.09
C2orf88-201ENST00000340623 SSH2Q76I76 1423 aa14.47□□□□□ -0.09
C2orf88-201ENST00000340623 MAP2P11137 1827 aaKnown RBP14.47□□□□□ -0.09
C2orf88-201ENST00000340623 PKNOX2Q96KN3 472 aa14.47□□□□□ -0.09
C2orf88-201ENST00000340623 EXOC6BQ9Y2D4 811 aa14.47□□□□□ -0.09
C2orf88-201ENST00000340623 CHD2O14647 1828 aaKnown RBP14.47□□□□□ -0.09
C2orf88-201ENST00000340623 GIGYF1O75420 1035 aaPredicted RBP14.47□□□□□ -0.09
C2orf88-201ENST00000340623 NEUROD6Q96NK8 337 aa14.47□□□□□ -0.09
C2orf88-201ENST00000340623 HSP90AB4PQ58FF6 505 aa14.47□□□□□ -0.09
C2orf88-201ENST00000340623 UBE3BQ7Z3V4 1068 aa14.47□□□□□ -0.09
C2orf88-201ENST00000340623 BCL11BQ9C0K0 894 aaPredicted RBP14.47□□□□□ -0.09
C2orf88-201ENST00000340623 USP32Q8NFA0 1604 aa14.47□□□□□ -0.09
C2orf88-201ENST00000340623 TRMT2AQ8IZ69 625 aaKnown RBP14.46□□□□□ -0.09
C2orf88-201ENST00000340623 PRAMEF22A3QJZ6 481 aa14.46□□□□□ -0.09
C2orf88-201ENST00000340623 KSR2Q6VAB6 950 aa14.46□□□□□ -0.09
C2orf88-201ENST00000340623 MFAP1P55081 439 aaKnown RBP14.46□□□□□ -0.1
C2orf88-201ENST00000340623 ZNF853P0CG23 659 aa14.45□□□□□ -0.1
C2orf88-201ENST00000340623 CWF19L2Q2TBE0 894 aaKnown RBP14.45□□□□□ -0.1
C2orf88-201ENST00000340623 TPRNQ4KMQ1 711 aa14.45□□□□□ -0.1
C2orf88-201ENST00000340623 RPAP2Q8IXW5 612 aaPredicted RBP14.45□□□□□ -0.1
C2orf88-201ENST00000340623 TRMT112Q9UI30 125 aaKnown RBP14.45□□□□□ -0.1
C2orf88-201ENST00000340623 ZNF652Q9Y2D9 606 aa14.45□□□□□ -0.1
C2orf88-201ENST00000340623 CRB1P82279 1406 aa14.45□□□□□ -0.1
C2orf88-201ENST00000340623 SEPT12Q8IYM1 358 aa14.45□□□□□ -0.1
C2orf88-201ENST00000340623 KIF20BQ96Q89 1820 aa14.45□□□□□ -0.1
C2orf88-201ENST00000340623 HOXB7P09629 217 aa14.44□□□□□ -0.1
C2orf88-201ENST00000340623 CLASRPQ8N2M8 674 aaKnown RBP14.44□□□□□ -0.1
C2orf88-201ENST00000340623 IL1RAPL2Q9NP60 686 aa14.44□□□□□ -0.1
C2orf88-201ENST00000340623 CCNL1Q9UK58 526 aaPredicted RBP14.44□□□□□ -0.1
C2orf88-201ENST00000340623 KDRP35968 1356 aa14.44□□□□□ -0.1
C2orf88-201ENST00000340623 FMN2Q9NZ56 1722 aa14.44□□□□□ -0.1
C2orf88-201ENST00000340623 SPATA31A6Q5VVP1 1343 aa14.44□□□□□ -0.1
C2orf88-201ENST00000340623 PCDHB15Q9Y5E8 787 aa14.44□□□□□ -0.1
C2orf88-201ENST00000340623 NALCNQ8IZF0 1738 aa14.43□□□□□ -0.1
C2orf88-201ENST00000340623 CCDC57Q2TAC2 916 aa14.43□□□□□ -0.1
C2orf88-201ENST00000340623 KCNQ4P56696 695 aa14.43□□□□□ -0.1
C2orf88-201ENST00000340623 DZIP3Q86Y13 1208 aaKnown RBP14.43□□□□□ -0.1
C2orf88-201ENST00000340623 GCC1Q96CN9 775 aa14.43□□□□□ -0.1
C2orf88-201ENST00000340623 THRAP3Q9Y2W1 955 aaKnown RBP14.43□□□□□ -0.1
C2orf88-201ENST00000340623 CPDO75976 1380 aa14.43□□□□□ -0.1
C2orf88-201ENST00000340623 BECN1Q14457 450 aa14.43□□□□□ -0.1
C2orf88-201ENST00000340623 ZNF772Q68DY9 489 aaPredicted RBP14.43□□□□□ -0.1
C2orf88-201ENST00000340623 PIGBQ92521 554 aa14.43□□□□□ -0.1
C2orf88-201ENST00000340623 CNNM1Q9NRU3 951 aa14.43□□□□□ -0.1
C2orf88-201ENST00000340623 G3V3G9 751 aa14.42□□□□□ -0.1
C2orf88-201ENST00000340623 HSP90AB3PQ58FF7 597 aa14.42□□□□□ -0.1
C2orf88-201ENST00000340623 DCAF8Q5TAQ9 597 aa14.42□□□□□ -0.1
C2orf88-201ENST00000340623 KIAA1211Q6ZU35 1233 aa14.42□□□□□ -0.1
C2orf88-201ENST00000340623 CWC25Q9NXE8 425 aaPredicted RBP14.42□□□□□ -0.1
C2orf88-201ENST00000340623 RGPD8O14715 1765 aaPredicted RBP14.42□□□□□ -0.1
C2orf88-201ENST00000340623 RFC4P35249 363 aa14.42□□□□□ -0.1
C2orf88-201ENST00000340623 PPP1R1BQ9UD71 204 aaPredicted RBP14.42□□□□□ -0.1
C2orf88-201ENST00000340623 SOS1Q07889 1333 aaPredicted RBP14.41□□□□□ -0.1
C2orf88-201ENST00000340623 GNPATO15228 680 aa14.41□□□□□ -0.1
C2orf88-201ENST00000340623 HSP90B1P14625 803 aaKnown RBP14.41□□□□□ -0.1
C2orf88-201ENST00000340623 RXRBP28702 533 aa14.41□□□□□ -0.1
C2orf88-201ENST00000340623 PROSER3Q2NL68 480 aa14.41□□□□□ -0.1
C2orf88-201ENST00000340623 LINS1Q8NG48 757 aa14.41□□□□□ -0.1
C2orf88-201ENST00000340623 GJD4Q96KN9 370 aaPredicted RBP14.41□□□□□ -0.1
C2orf88-201ENST00000340623 SMARCA5O60264 1052 aaPredicted RBP14.4□□□□□ -0.1
C2orf88-201ENST00000340623 IGHDP01880 384 aa14.4□□□□□ -0.1
C2orf88-201ENST00000340623 LRRCC1Q9C099 1032 aa14.4□□□□□ -0.1
C2orf88-201ENST00000340623 MPHOSPH8Q99549 860 aa14.39□□□□□ -0.11
C2orf88-201ENST00000340623 RTCBQ9Y3I0 505 aaKnown RBP14.39□□□□□ -0.11
C2orf88-201ENST00000340623 GRM8O00222 908 aa14.39□□□□□ -0.11
C2orf88-201ENST00000340623 TRIM37O94972 964 aa14.39□□□□□ -0.11
C2orf88-201ENST00000340623 PPP1R42Q7Z4L9 355 aa14.39□□□□□ -0.11
C2orf88-201ENST00000340623 VPS37DQ86XT2 251 aa14.39□□□□□ -0.11
C2orf88-201ENST00000340623 SETD1AO15047 1707 aaKnown RBP14.39□□□□□ -0.11
C2orf88-201ENST00000340623 LOC102724428A0A0B4J2F2 783 aa14.39□□□□□ -0.11
C2orf88-201ENST00000340623 SIK1P57059 783 aa14.39□□□□□ -0.11
C2orf88-201ENST00000340623 FAM161AQ3B820 660 aa14.39□□□□□ -0.11
C2orf88-201ENST00000340623 KRT27Q7Z3Y8 459 aa14.39□□□□□ -0.11
C2orf88-201ENST00000340623 SPATA31A1Q5TZJ5 1347 aa14.39□□□□□ -0.11
C2orf88-201ENST00000340623 COL3A1P02461 1466 aaPredicted RBP14.39□□□□□ -0.11
C2orf88-201ENST00000340623 CHD1LQ86WJ1 897 aa14.38□□□□□ -0.11
C2orf88-201ENST00000340623 NIP7Q9Y221 180 aaKnown RBP eCLIP14.38□□□□□ -0.11
C2orf88-201ENST00000340623 KIF1AQ12756 1690 aa14.38□□□□□ -0.11
C2orf88-201ENST00000340623 APBA3O96018 575 aa14.38□□□□□ -0.11
C2orf88-201ENST00000340623 VPS72Q15906 364 aa14.38□□□□□ -0.11
C2orf88-201ENST00000340623 TFCP2L1Q9NZI6 479 aa14.38□□□□□ -0.11
C2orf88-201ENST00000340623 KCNQ2O43526 872 aa14.37□□□□□ -0.11
C2orf88-201ENST00000340623 ALDH1L1O75891 902 aa14.37□□□□□ -0.11
C2orf88-201ENST00000340623 TTLL7Q6ZT98 887 aa14.37□□□□□ -0.11
C2orf88-201ENST00000340623 CCDC87Q9NVE4 849 aa14.37□□□□□ -0.11
C2orf88-201ENST00000340623 BRPF3Q9ULD4 1205 aa14.37□□□□□ -0.11
C2orf88-201ENST00000340623 FGD1P98174 961 aa14.37□□□□□ -0.11
C2orf88-201ENST00000340623 ERC1Q8IUD2 1116 aa14.37□□□□□ -0.11
C2orf88-201ENST00000340623 FOXD4L1Q9NU39 408 aa14.37□□□□□ -0.11
C2orf88-201ENST00000340623 AACSQ86V21 672 aa14.36□□□□□ -0.11
C2orf88-201ENST00000340623 ZBTB40Q9NUA8 1239 aa14.36□□□□□ -0.11
C2orf88-201ENST00000340623 CEP126Q9P2H0 1117 aa14.36□□□□□ -0.11
C2orf88-201ENST00000340623 MCCP23508 829 aa14.36□□□□□ -0.11
C2orf88-201ENST00000340623 DIAPH3Q9NSV4 1193 aa14.36□□□□□ -0.11
C2orf88-201ENST00000340623 IFIT5Q13325 482 aaKnown RBP14.35□□□□□ -0.11
C2orf88-201ENST00000340623 NUTM1Q86Y26 1132 aa14.35□□□□□ -0.11
C2orf88-201ENST00000340623 PLBD2Q8NHP8 589 aa14.35□□□□□ -0.11
C2orf88-201ENST00000340623 ZBTB1Q9Y2K1 713 aa14.35□□□□□ -0.11
C2orf88-201ENST00000340623 NWD1Q149M9 1564 aa14.35□□□□□ -0.11
C2orf88-201ENST00000340623 SPATA31A5Q5VU36 1347 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms