RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 CHPF2Q9P2E5 772 aa18.88■□□□□ 0.61
CSRP1-201ENST00000340006 C5P01031 1676 aa18.88■□□□□ 0.61
CSRP1-201ENST00000340006 CANXP27824 592 aaKnown RBP18.88■□□□□ 0.61
CSRP1-201ENST00000340006 CYP19A1P11511 503 aaPredicted RBP18.87■□□□□ 0.61
CSRP1-201ENST00000340006 PIP4K2AP48426 406 aaPredicted RBP18.87■□□□□ 0.61
CSRP1-201ENST00000340006 ITPK1Q13572 414 aa18.87■□□□□ 0.61
CSRP1-201ENST00000340006 ANXA1P04083 346 aa18.86■□□□□ 0.61
CSRP1-201ENST00000340006 MRPL50Q8N5N7 158 aaKnown RBP18.86■□□□□ 0.61
CSRP1-201ENST00000340006 NEFLP07196 543 aa18.86■□□□□ 0.61
CSRP1-201ENST00000340006 ZNF330Q9Y3S2 320 aaPredicted RBP18.86■□□□□ 0.61
CSRP1-201ENST00000340006 TXNRD1Q16881 649 aa18.85■□□□□ 0.61
CSRP1-201ENST00000340006 SLC27A3Q5K4L6 730 aa18.85■□□□□ 0.61
CSRP1-201ENST00000340006 NPM2Q86SE8 214 aaKnown RBP18.85■□□□□ 0.61
CSRP1-201ENST00000340006 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.85■□□□□ 0.61
CSRP1-201ENST00000340006 ARXQ96QS3 562 aa18.85■□□□□ 0.61
CSRP1-201ENST00000340006 DDX21Q9NR30 783 aaKnown RBP eCLIP18.85■□□□□ 0.61
CSRP1-201ENST00000340006 NOB1Q9ULX3 412 aaKnown RBP18.85■□□□□ 0.61
CSRP1-201ENST00000340006 CACNA1FO60840 1977 aa18.85■□□□□ 0.61
CSRP1-201ENST00000340006 PLIN1O60240 522 aa18.84■□□□□ 0.61
CSRP1-201ENST00000340006 EN1Q05925 392 aaPredicted RBP18.84■□□□□ 0.61
CSRP1-201ENST00000340006 CCDC125Q86Z20 511 aa18.84■□□□□ 0.61
CSRP1-201ENST00000340006 HYPKQ9NX55 129 aa18.84■□□□□ 0.61
CSRP1-201ENST00000340006 LY75O60449 1722 aa18.84■□□□□ 0.61
CSRP1-201ENST00000340006 IPO8O15397 1037 aaKnown RBP18.84■□□□□ 0.61
CSRP1-201ENST00000340006 BAG6P46379 1132 aa18.84■□□□□ 0.61
CSRP1-201ENST00000340006 CRKLP46109 303 aaKnown RBP18.83■□□□□ 0.61
CSRP1-201ENST00000340006 AIMP1Q12904 312 aaKnown RBP18.83■□□□□ 0.61
CSRP1-201ENST00000340006 PROSER3Q2NL68 480 aa18.83■□□□□ 0.61
CSRP1-201ENST00000340006 PROM2Q8N271 834 aa18.83■□□□□ 0.61
CSRP1-201ENST00000340006 LINC00116Q8NCU8 138 aa18.83■□□□□ 0.61
CSRP1-201ENST00000340006 PHAXQ9H814 394 aaKnown RBP18.83■□□□□ 0.61
CSRP1-201ENST00000340006 LRRC4BQ9NT99 713 aa18.83■□□□□ 0.61
CSRP1-201ENST00000340006 HMGB2P26583 209 aaKnown RBP18.82■□□□□ 0.6
CSRP1-201ENST00000340006 PDIA6Q15084 440 aa18.82■□□□□ 0.6
CSRP1-201ENST00000340006 G2E3Q7L622 706 aa18.82■□□□□ 0.6
CSRP1-201ENST00000340006 CCDC87Q9NVE4 849 aa18.82■□□□□ 0.6
CSRP1-201ENST00000340006 LAMB4A4D0S4 1761 aa18.82■□□□□ 0.6
CSRP1-201ENST00000340006 NBPF26B4DH59 902 aa18.82■□□□□ 0.6
CSRP1-201ENST00000340006 NBPF14Q5TI25 921 aa18.82■□□□□ 0.6
CSRP1-201ENST00000340006 NBPF10Q6P3W6 841 aaKnown RBP18.82■□□□□ 0.6
CSRP1-201ENST00000340006 NBPF15Q8N660 670 aa18.82■□□□□ 0.6
CSRP1-201ENST00000340006 RNF123Q5XPI4 1314 aa18.82■□□□□ 0.6
CSRP1-201ENST00000340006 BRPF1P55201 1214 aaPredicted RBP18.81■□□□□ 0.6
CSRP1-201ENST00000340006 EZH2Q15910 746 aaKnown RBP18.81■□□□□ 0.6
CSRP1-201ENST00000340006 ERBB4Q15303 1308 aa18.81■□□□□ 0.6
CSRP1-201ENST00000340006 KIF16BQ96L93 1317 aa18.81■□□□□ 0.6
CSRP1-201ENST00000340006 TJP1Q07157 1748 aa18.81■□□□□ 0.6
CSRP1-201ENST00000340006 TNS1Q9HBL0 1735 aaKnown RBP18.81■□□□□ 0.6
CSRP1-201ENST00000340006 FKBP5Q13451 457 aaPredicted RBP18.81■□□□□ 0.6
CSRP1-201ENST00000340006 FKBP8Q14318 412 aa18.81■□□□□ 0.6
CSRP1-201ENST00000340006 ZKSCAN2Q63HK3 967 aa18.81■□□□□ 0.6
CSRP1-201ENST00000340006 INTS5Q6P9B9 1019 aaKnown RBP18.81■□□□□ 0.6
CSRP1-201ENST00000340006 ZBTB1Q9Y2K1 713 aa18.81■□□□□ 0.6
CSRP1-201ENST00000340006 FLIIQ13045 1269 aa18.8■□□□□ 0.6
CSRP1-201ENST00000340006 COPS6Q7L5N1 327 aa18.8■□□□□ 0.6
CSRP1-201ENST00000340006 DEFB132Q7Z7B7 95 aa18.8■□□□□ 0.6
CSRP1-201ENST00000340006 RRP1P56182 461 aaKnown RBP18.79■□□□□ 0.6
CSRP1-201ENST00000340006 ZNF831Q5JPB2 1677 aa18.79■□□□□ 0.6
CSRP1-201ENST00000340006 RC3H1Q5TC82 1133 aaKnown RBP18.79■□□□□ 0.6
CSRP1-201ENST00000340006 XAGE3Q8WTP9 111 aa18.79■□□□□ 0.6
CSRP1-201ENST00000340006 AK7Q96M32 723 aa18.79■□□□□ 0.6
CSRP1-201ENST00000340006 CAMKK2Q96RR4 588 aa18.79■□□□□ 0.6
CSRP1-201ENST00000340006 CLUAP1Q96AJ1 413 aa18.78■□□□□ 0.6
CSRP1-201ENST00000340006 TAF1LQ8IZX4 1826 aa18.78■□□□□ 0.6
CSRP1-201ENST00000340006 MYH14Q7Z406 1995 aaKnown RBP18.78■□□□□ 0.6
CSRP1-201ENST00000340006 DDX58O95786 925 aaKnown RBP18.77■□□□□ 0.6
CSRP1-201ENST00000340006 IL6STP40189 918 aaPredicted RBP18.77■□□□□ 0.6
CSRP1-201ENST00000340006 IRX6P78412 446 aaPredicted RBP18.77■□□□□ 0.6
CSRP1-201ENST00000340006 ATF7IPQ6VMQ6 1270 aa18.77■□□□□ 0.6
CSRP1-201ENST00000340006 ILDR2Q71H61 639 aa18.77■□□□□ 0.6
CSRP1-201ENST00000340006 ARHGAP45Q92619 1136 aa18.77■□□□□ 0.6
CSRP1-201ENST00000340006 PTPRCP08575 1304 aa18.77■□□□□ 0.6
CSRP1-201ENST00000340006 GNPATO15228 680 aa18.77■□□□□ 0.59
CSRP1-201ENST00000340006 FTSJ3Q8IY81 847 aaKnown RBP18.77■□□□□ 0.59
CSRP1-201ENST00000340006 RTCBQ9Y3I0 505 aaKnown RBP18.77■□□□□ 0.59
CSRP1-201ENST00000340006 CNTNAP4Q9C0A0 1308 aa18.76■□□□□ 0.59
CSRP1-201ENST00000340006 ANKRD13DQ6ZTN6 518 aa18.76■□□□□ 0.59
CSRP1-201ENST00000340006 RIC3Q7Z5B4 369 aa18.76■□□□□ 0.59
CSRP1-201ENST00000340006 UPF1Q92900 1129 aaKnown RBP eCLIP18.76■□□□□ 0.592e-7■■■■■ 33.2
CSRP1-201ENST00000340006 API5Q9BZZ5 524 aaKnown RBP18.76■□□□□ 0.59
CSRP1-201ENST00000340006 COL5A3P25940 1745 aaPredicted RBP18.76■□□□□ 0.59
CSRP1-201ENST00000340006 MS4A1P11836 297 aa18.75■□□□□ 0.59
CSRP1-201ENST00000340006 SLC4A10Q6U841 1118 aa18.75■□□□□ 0.59
CSRP1-201ENST00000340006 PI4KAP2A4QPH2 592 aa18.75■□□□□ 0.59
CSRP1-201ENST00000340006 RPS6KA4O75676 772 aa18.75■□□□□ 0.59
CSRP1-201ENST00000340006 TRIM27P14373 513 aa18.75■□□□□ 0.59
CSRP1-201ENST00000340006 KIF6Q6ZMV9 814 aa18.75■□□□□ 0.59
CSRP1-201ENST00000340006 PI4KAP1Q8N8J0 262 aa18.75■□□□□ 0.59
CSRP1-201ENST00000340006 TBC1D2BQ9UPU7 963 aa18.75■□□□□ 0.59
CSRP1-201ENST00000340006 F6X3S4 739 aa18.74■□□□□ 0.59
CSRP1-201ENST00000340006 EIF5P55010 431 aaKnown RBP18.74■□□□□ 0.59
CSRP1-201ENST00000340006 TTLL7Q6ZT98 887 aa18.74■□□□□ 0.59
CSRP1-201ENST00000340006 LRP10Q7Z4F1 713 aa18.74■□□□□ 0.59
CSRP1-201ENST00000340006 DZIP1LQ8IYY4 767 aaKnown RBP18.74■□□□□ 0.59
CSRP1-201ENST00000340006 KSR2Q6VAB6 950 aa18.73■□□□□ 0.59
CSRP1-201ENST00000340006 SMIM5Q71RC9 77 aa18.73■□□□□ 0.59
CSRP1-201ENST00000340006 TFCP2L1Q9NZI6 479 aa18.73■□□□□ 0.59
CSRP1-201ENST00000340006 TNNQ9UQP3 1299 aa18.73■□□□□ 0.59
CSRP1-201ENST00000340006 CICQ96RK0 1608 aaPredicted RBP18.73■□□□□ 0.59
CSRP1-201ENST00000340006 C4BP0C0L5 1744 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms