RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 ATF7IPQ6VMQ6 1270 aa18.55■□□□□ 0.56
NIPAL3-202ENST00000339255 RBM42Q9BTD8 480 aaKnown RBP18.55■□□□□ 0.56
NIPAL3-202ENST00000339255 COL5A3P25940 1745 aaPredicted RBP18.55■□□□□ 0.56
NIPAL3-202ENST00000339255 PRAMEF22A3QJZ6 481 aa18.54■□□□□ 0.56
NIPAL3-202ENST00000339255 PLIN1O60240 522 aa18.54■□□□□ 0.56
NIPAL3-202ENST00000339255 STARD3NLO95772 234 aa18.54■□□□□ 0.56
NIPAL3-202ENST00000339255 DDX21Q9NR30 783 aaKnown RBP eCLIP18.54■□□□□ 0.56
NIPAL3-202ENST00000339255 HYPKQ9NX55 129 aa18.54■□□□□ 0.56
NIPAL3-202ENST00000339255 CHPF2Q9P2E5 772 aa18.54■□□□□ 0.56
NIPAL3-202ENST00000339255 N4BP2Q86UW6 1770 aaPredicted RBP18.54■□□□□ 0.56
NIPAL3-202ENST00000339255 LOC102724428A0A0B4J2F2 783 aa18.54■□□□□ 0.56
NIPAL3-202ENST00000339255 TCERG1O14776 1098 aaKnown RBP18.54■□□□□ 0.56
NIPAL3-202ENST00000339255 SIK1P57059 783 aa18.54■□□□□ 0.56
NIPAL3-202ENST00000339255 NECTIN2Q92692 538 aa18.54■□□□□ 0.56
NIPAL3-202ENST00000339255 NOB1Q9ULX3 412 aaKnown RBP18.54■□□□□ 0.56
NIPAL3-202ENST00000339255 API5Q9BZZ5 524 aaKnown RBP18.53■□□□□ 0.56
NIPAL3-202ENST00000339255 USP16Q9Y5T5 823 aa18.53■□□□□ 0.56
NIPAL3-202ENST00000339255 RREB1Q92766 1687 aa18.52■□□□□ 0.56
NIPAL3-202ENST00000339255 TRIM27P14373 513 aa18.52■□□□□ 0.56
NIPAL3-202ENST00000339255 FTSJ3Q8IY81 847 aaKnown RBP18.52■□□□□ 0.56
NIPAL3-202ENST00000339255 RGPD3A6NKT7 1758 aaPredicted RBP18.52■□□□□ 0.56
NIPAL3-202ENST00000339255 RGPD4Q7Z3J3 1758 aa18.52■□□□□ 0.56
NIPAL3-202ENST00000339255 TAF1LQ8IZX4 1826 aa18.52■□□□□ 0.55
NIPAL3-202ENST00000339255 FLIIQ13045 1269 aa18.51■□□□□ 0.55
NIPAL3-202ENST00000339255 ERICH6BQ5W0A0 696 aa18.51■□□□□ 0.55
NIPAL3-202ENST00000339255 TNS1Q9HBL0 1735 aaKnown RBP18.51■□□□□ 0.55
NIPAL3-202ENST00000339255 DZIP1LQ8IYY4 767 aaKnown RBP18.5■□□□□ 0.55
NIPAL3-202ENST00000339255 HMGB2P26583 209 aaKnown RBP18.5■□□□□ 0.55
NIPAL3-202ENST00000339255 ATP6V1AP38606 617 aa18.5■□□□□ 0.55
NIPAL3-202ENST00000339255 PTF1AQ7RTS3 328 aa18.5■□□□□ 0.55
NIPAL3-202ENST00000339255 DNAJC10Q8IXB1 793 aa18.5■□□□□ 0.55
NIPAL3-202ENST00000339255 SLC4A9Q96Q91 983 aa18.5■□□□□ 0.55
NIPAL3-202ENST00000339255 TRIM37O94972 964 aa18.49■□□□□ 0.55
NIPAL3-202ENST00000339255 PDIA6Q15084 440 aa18.49■□□□□ 0.55
NIPAL3-202ENST00000339255 PXDNLA1KZ92 1463 aa18.49■□□□□ 0.55
NIPAL3-202ENST00000339255 ABCC4O15439 1325 aa18.49■□□□□ 0.55
NIPAL3-202ENST00000339255 CYP19A1P11511 503 aaPredicted RBP18.48■□□□□ 0.55
NIPAL3-202ENST00000339255 FKBP5Q13451 457 aaPredicted RBP18.48■□□□□ 0.55
NIPAL3-202ENST00000339255 DDX58O95786 925 aaKnown RBP18.47■□□□□ 0.55
NIPAL3-202ENST00000339255 FKBP8Q14318 412 aa18.47■□□□□ 0.55
NIPAL3-202ENST00000339255 MYH14Q7Z406 1995 aaKnown RBP18.47■□□□□ 0.55
NIPAL3-202ENST00000339255 PROSER3Q2NL68 480 aa18.47■□□□□ 0.55
NIPAL3-202ENST00000339255 C20orf194Q5TEA3 1177 aa18.47■□□□□ 0.55
NIPAL3-202ENST00000339255 G2E3Q7L622 706 aa18.47■□□□□ 0.55
NIPAL3-202ENST00000339255 IRX6P78412 446 aaPredicted RBP18.46■□□□□ 0.55
NIPAL3-202ENST00000339255 CLUAP1Q96AJ1 413 aa18.46■□□□□ 0.55
NIPAL3-202ENST00000339255 PANK1Q8TE04 598 aa18.45■□□□□ 0.54
NIPAL3-202ENST00000339255 PHAXQ9H814 394 aaKnown RBP18.45■□□□□ 0.54
NIPAL3-202ENST00000339255 GTF3C3Q9Y5Q9 886 aa18.45■□□□□ 0.54
NIPAL3-202ENST00000339255 ARFGEF2Q9Y6D5 1785 aa18.45■□□□□ 0.54
NIPAL3-202ENST00000339255 NBPF26B4DH59 902 aa18.44■□□□□ 0.54
NIPAL3-202ENST00000339255 ANXA1P04083 346 aa18.44■□□□□ 0.54
NIPAL3-202ENST00000339255 A1BGP04217 495 aa18.44■□□□□ 0.54
NIPAL3-202ENST00000339255 RLBP1P12271 317 aa18.44■□□□□ 0.54
NIPAL3-202ENST00000339255 MYL6BP14649 208 aa18.44■□□□□ 0.54
NIPAL3-202ENST00000339255 ITPK1Q13572 414 aa18.44■□□□□ 0.54
NIPAL3-202ENST00000339255 AAMPQ13685 434 aa18.44■□□□□ 0.54
NIPAL3-202ENST00000339255 SLC27A3Q5K4L6 730 aa18.44■□□□□ 0.54
NIPAL3-202ENST00000339255 NBPF14Q5TI25 921 aa18.44■□□□□ 0.54
NIPAL3-202ENST00000339255 NBPF10Q6P3W6 841 aaKnown RBP18.44■□□□□ 0.54
NIPAL3-202ENST00000339255 LRP10Q7Z4F1 713 aa18.44■□□□□ 0.54
NIPAL3-202ENST00000339255 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
NIPAL3-202ENST00000339255 CCDC87Q9NVE4 849 aa18.44■□□□□ 0.54
NIPAL3-202ENST00000339255 CCNL1Q9UK58 526 aaPredicted RBP18.44■□□□□ 0.54
NIPAL3-202ENST00000339255 NUP188Q5SRE5 1749 aa18.44■□□□□ 0.54
NIPAL3-202ENST00000339255 CNTNAP4Q9C0A0 1308 aa18.44■□□□□ 0.54
NIPAL3-202ENST00000339255 PLSCR1O15162 318 aa18.43■□□□□ 0.54
NIPAL3-202ENST00000339255 CRKLP46109 303 aaKnown RBP18.43■□□□□ 0.54
NIPAL3-202ENST00000339255 MVPQ14764 893 aaKnown RBP18.43■□□□□ 0.54
NIPAL3-202ENST00000339255 CHMP4BQ9H444 224 aaKnown RBP18.43■□□□□ 0.54
NIPAL3-202ENST00000339255 C4BP0C0L5 1744 aa18.43■□□□□ 0.54
NIPAL3-202ENST00000339255 IL6STP40189 918 aaPredicted RBP18.42■□□□□ 0.54
NIPAL3-202ENST00000339255 INTS3Q68E01 1043 aaKnown RBP18.42■□□□□ 0.54
NIPAL3-202ENST00000339255 KSR2Q6VAB6 950 aa18.42■□□□□ 0.54
NIPAL3-202ENST00000339255 CRBNQ96SW2 442 aa18.42■□□□□ 0.54
NIPAL3-202ENST00000339255 DDX19BQ9UMR2 479 aa18.42■□□□□ 0.54
NIPAL3-202ENST00000339255 ATP10DQ9P241 1426 aa18.42■□□□□ 0.54
NIPAL3-202ENST00000339255 ADCY9O60503 1353 aa18.42■□□□□ 0.54
NIPAL3-202ENST00000339255 CCT4P50991 539 aaKnown RBP18.41■□□□□ 0.54
NIPAL3-202ENST00000339255 NPM2Q86SE8 214 aaKnown RBP18.41■□□□□ 0.54
NIPAL3-202ENST00000339255 ITPRIPQ8IWB1 547 aa18.41■□□□□ 0.54
NIPAL3-202ENST00000339255 XAGE3Q8WTP9 111 aa18.41■□□□□ 0.54
NIPAL3-202ENST00000339255 TNNQ9UQP3 1299 aa18.41■□□□□ 0.54
NIPAL3-202ENST00000339255 COG6Q9Y2V7 657 aa18.41■□□□□ 0.54
NIPAL3-202ENST00000339255 RC3H1Q5TC82 1133 aaKnown RBP18.41■□□□□ 0.54
NIPAL3-202ENST00000339255 COPS6Q7L5N1 327 aa18.41■□□□□ 0.54
NIPAL3-202ENST00000339255 TMEM57Q8N5G2 664 aa18.41■□□□□ 0.54
NIPAL3-202ENST00000339255 DNAAF4Q8WXU2 420 aa18.41■□□□□ 0.54
NIPAL3-202ENST00000339255 ZBTB1Q9Y2K1 713 aa18.41■□□□□ 0.54
NIPAL3-202ENST00000339255 PI4KAP2A4QPH2 592 aa18.4■□□□□ 0.54
NIPAL3-202ENST00000339255 PIP4K2AP48426 406 aaPredicted RBP18.4■□□□□ 0.54
NIPAL3-202ENST00000339255 INTS5Q6P9B9 1019 aaKnown RBP18.4■□□□□ 0.54
NIPAL3-202ENST00000339255 ANKRD13DQ6ZTN6 518 aa18.4■□□□□ 0.54
NIPAL3-202ENST00000339255 PI4KAP1Q8N8J0 262 aa18.4■□□□□ 0.54
NIPAL3-202ENST00000339255 LINC00116Q8NCU8 138 aa18.4■□□□□ 0.54
NIPAL3-202ENST00000339255 F6X3S4 739 aa18.39■□□□□ 0.53
NIPAL3-202ENST00000339255 APBA3O96018 575 aa18.39■□□□□ 0.53
NIPAL3-202ENST00000339255 AIMP1Q12904 312 aaKnown RBP18.39■□□□□ 0.53
NIPAL3-202ENST00000339255 PLBD2Q8NHP8 589 aa18.39■□□□□ 0.53
NIPAL3-202ENST00000339255 EXOC6Q8TAG9 804 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms