RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 GCOM1H8Y6P7 765 aaPredicted RBP13.65□□□□□ -0.22
SHANK2-201ENST00000338508 MYZAPP0CAP1 466 aa13.65□□□□□ -0.22
SHANK2-201ENST00000338508 ZNF622Q969S3 477 aaKnown RBP eCLIP13.65□□□□□ -0.22
SHANK2-201ENST00000338508 PANK2Q9BZ23 570 aa13.65□□□□□ -0.22
SHANK2-201ENST00000338508 KIF5CO60282 957 aa13.65□□□□□ -0.22
SHANK2-201ENST00000338508 RAB11FIP4Q86YS3 637 aa13.65□□□□□ -0.22
SHANK2-201ENST00000338508 PAIP2Q9BPZ3 127 aaKnown RBP13.65□□□□□ -0.22
SHANK2-201ENST00000338508 TMOD3Q9NYL9 352 aa13.65□□□□□ -0.22
SHANK2-201ENST00000338508 CKAP2LQ8IYA6 745 aa13.65□□□□□ -0.22
SHANK2-201ENST00000338508 GPTP24298 496 aa13.65□□□□□ -0.22
SHANK2-201ENST00000338508 PPP1R14CQ8TAE6 165 aa13.65□□□□□ -0.22
SHANK2-201ENST00000338508 MAP3K11Q16584 847 aa13.65□□□□□ -0.23
SHANK2-201ENST00000338508 TMEM266Q2M3C6 531 aa13.64□□□□□ -0.23
SHANK2-201ENST00000338508 CLEC11AQ9Y240 323 aa13.64□□□□□ -0.23
SHANK2-201ENST00000338508 CBX1P83916 185 aa13.64□□□□□ -0.23
SHANK2-201ENST00000338508 SYNCQ9H7C4 482 aa13.64□□□□□ -0.23
SHANK2-201ENST00000338508 IFIT1P09914 478 aaKnown RBP13.64□□□□□ -0.23
SHANK2-201ENST00000338508 PPP2R1AP30153 589 aa13.64□□□□□ -0.23
SHANK2-201ENST00000338508 PRPF40BQ6NWY9 871 aaKnown RBP13.64□□□□□ -0.23
SHANK2-201ENST00000338508 TSNARE1Q96NA8 513 aa13.64□□□□□ -0.23
SHANK2-201ENST00000338508 ATP2C2O75185 946 aa13.64□□□□□ -0.23
SHANK2-201ENST00000338508 MTIF2P46199 727 aaKnown RBP13.63□□□□□ -0.23
SHANK2-201ENST00000338508 CTCFLQ8NI51 663 aaPredicted RBP13.63□□□□□ -0.23
SHANK2-201ENST00000338508 FAM107BQ9H098 131 aa13.63□□□□□ -0.23
SHANK2-201ENST00000338508 BIN1O00499 593 aa13.63□□□□□ -0.23
SHANK2-201ENST00000338508 SLC12A7Q9Y666 1083 aa13.63□□□□□ -0.23
SHANK2-201ENST00000338508 PNISRQ8TF01 805 aaKnown RBP13.63□□□□□ -0.23
SHANK2-201ENST00000338508 IPO4Q8TEX9 1081 aaKnown RBP13.63□□□□□ -0.23
SHANK2-201ENST00000338508 MYO1BO43795 1136 aa13.63□□□□□ -0.23
SHANK2-201ENST00000338508 TOP1P11387 765 aaKnown RBP13.63□□□□□ -0.23
SHANK2-201ENST00000338508 CCDC8Q9H0W5 538 aaPredicted RBP13.62□□□□□ -0.23
SHANK2-201ENST00000338508 IDEP14735 1019 aa13.62□□□□□ -0.23
SHANK2-201ENST00000338508 SSRP1Q08945 709 aaKnown RBP13.62□□□□□ -0.23
SHANK2-201ENST00000338508 RRBP1Q9P2E9 1410 aaKnown RBP13.62□□□□□ -0.23
SHANK2-201ENST00000338508 U3KPZ7 1027 aaPredicted RBP13.62□□□□□ -0.23
SHANK2-201ENST00000338508 PTPN14Q15678 1187 aa13.62□□□□□ -0.23
SHANK2-201ENST00000338508 C8orf76Q96K31 380 aa13.62□□□□□ -0.23
SHANK2-201ENST00000338508 ARHGAP5Q13017 1502 aa13.62□□□□□ -0.23
SHANK2-201ENST00000338508 ZMYND15Q9H091 742 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 FSD2A1L4K1 749 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 IFIT3O14879 490 aaKnown RBP13.61□□□□□ -0.23
SHANK2-201ENST00000338508 ZWINTO95229 277 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 KRT32Q14532 448 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 CCDC40Q4G0X9 1142 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 FAM212AQ96EL1 285 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 PPP6R1Q9UPN7 881 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 IQCA1Q86XH1 822 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 GPATCH11Q8N954 259 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 TRMT112Q9UI30 125 aaKnown RBP13.61□□□□□ -0.23
SHANK2-201ENST00000338508 GIGYF2Q6Y7W6 1299 aaKnown RBP13.61□□□□□ -0.23
SHANK2-201ENST00000338508 MCM10Q7L590 875 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 MAATS1Q7Z4T9 603 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 CNNM3Q8NE01 707 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 AQRO60306 1485 aaKnown RBP eCLIP13.61□□□□□ -0.235e-7■■■■■ 27.6
SHANK2-201ENST00000338508 CCDC194A0A1B0GVG4 234 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 BAG4O95429 457 aaKnown RBP13.61□□□□□ -0.23
SHANK2-201ENST00000338508 GJC1P36383 396 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 EHMT1Q9H9B1 1298 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 ZNF213O14771 459 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 SFPQP23246 707 aaKnown RBP eCLIP13.61□□□□□ -0.232e-6■■□□□ 14.2
SHANK2-201ENST00000338508 ANKRD18BA2A2Z9 1011 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 F8W031 263 aaPredicted RBP13.6□□□□□ -0.23
SHANK2-201ENST00000338508 PAFAH1B1P43034 410 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 PLS1Q14651 629 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 PDCL2Q8N4E4 241 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 RAB3IL1Q8TBN0 382 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 CCDC175P0C221 793 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 BMS1Q14692 1282 aaKnown RBP13.6□□□□□ -0.23
SHANK2-201ENST00000338508 RAB34Q9BZG1 259 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 PSMC4P43686 418 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 AKAP2Q9Y2D5 859 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 FGFR1OPO95684 399 aaKnown RBP13.6□□□□□ -0.23
SHANK2-201ENST00000338508 MAP9Q49MG5 647 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 LRSAM1Q6UWE0 723 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 GNAT3A8MTJ3 354 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 AFAP1Q8N556 730 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 ZSWIM4Q9H7M6 989 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 IKBKGQ9Y6K9 419 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 A0A1W2PRG0 241 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 SH3BP5O60239 455 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 USO1O60763 962 aaKnown RBP13.59□□□□□ -0.23
SHANK2-201ENST00000338508 IFIT5Q13325 482 aaKnown RBP13.59□□□□□ -0.23
SHANK2-201ENST00000338508 THUMPD2Q9BTF0 503 aaKnown RBP13.59□□□□□ -0.23
SHANK2-201ENST00000338508 CCDC7Q96M83 1385 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 MAP3K12Q12852 859 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 AKNAD1Q5T1N1 836 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 NGLY1Q96IV0 654 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 ZSCAN31Q96LW9 406 aaPredicted RBP13.59□□□□□ -0.23
SHANK2-201ENST00000338508 MXRA7P84157 204 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 TAOK3Q9H2K8 898 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 ATAD2BQ9ULI0 1458 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 TMEM110-MUSTN1A8MSY1 372 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 SLC5A1P13866 664 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 ATF7IPQ6VMQ6 1270 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 CATIPQ7Z7H3 387 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 TIGD1Q96MW7 591 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 THEMISQ8N1K5 641 aaPredicted RBP13.58□□□□□ -0.23
SHANK2-201ENST00000338508 GOLGA8BA8MQT2 603 aa13.58□□□□□ -0.24
SHANK2-201ENST00000338508 CETN1Q12798 172 aa13.58□□□□□ -0.24
SHANK2-201ENST00000338508 ATP2B3Q16720 1220 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms