RNA–Protein interactions for RNA: ENST00000338487.5

DUPD1-201, Transcript of dual specificity phosphatase and pro isomerase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUPD1, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUPD1-201ENST00000338487 VSIG10Q8N0Z9 540 aa21.28■■□□□ 1
DUPD1-201ENST00000338487 NLGN1Q8N2Q7 840 aa21.28■■□□□ 1
DUPD1-201ENST00000338487 THUMPD2Q9BTF0 503 aaKnown RBP21.28■■□□□ 1
DUPD1-201ENST00000338487 USPL1Q5W0Q7 1092 aa21.27■■□□□ 1
DUPD1-201ENST00000338487 MYBBP1AQ9BQG0 1328 aaKnown RBP21.27■□□□□ 0.99
DUPD1-201ENST00000338487 KIAA1551Q9HCM1 1747 aa21.26■□□□□ 0.99
DUPD1-201ENST00000338487 COL15A1P39059 1388 aa21.25■□□□□ 0.99
DUPD1-201ENST00000338487 KIF13BQ9NQT8 1826 aa21.25■□□□□ 0.99
DUPD1-201ENST00000338487 PIP4K2AP48426 406 aaPredicted RBP21.25■□□□□ 0.99
DUPD1-201ENST00000338487 DDR1Q08345 913 aa21.25■□□□□ 0.99
DUPD1-201ENST00000338487 FMNL2Q96PY5 1086 aa21.25■□□□□ 0.99
DUPD1-201ENST00000338487 A1BGP04217 495 aa21.24■□□□□ 0.99
DUPD1-201ENST00000338487 NFE2L2Q16236 605 aa21.24■□□□□ 0.99
DUPD1-201ENST00000338487 ZNF330Q9Y3S2 320 aaPredicted RBP21.24■□□□□ 0.99
DUPD1-201ENST00000338487 ZPR1O75312 459 aa21.23■□□□□ 0.99
DUPD1-201ENST00000338487 NEFMP07197 916 aa21.23■□□□□ 0.99
DUPD1-201ENST00000338487 CCDC146Q8IYE0 955 aa21.23■□□□□ 0.99
DUPD1-201ENST00000338487 BCL2L12Q9HB09 334 aa21.23■□□□□ 0.99
DUPD1-201ENST00000338487 USP16Q9Y5T5 823 aa21.23■□□□□ 0.99
DUPD1-201ENST00000338487 PARP3Q9Y6F1 533 aa21.23■□□□□ 0.99
DUPD1-201ENST00000338487 HTATSF1O43719 755 aaKnown RBP21.22■□□□□ 0.99
DUPD1-201ENST00000338487 STARD3NLO95772 234 aa21.22■□□□□ 0.99
DUPD1-201ENST00000338487 ZEB1P37275 1124 aaPredicted RBP21.22■□□□□ 0.99
DUPD1-201ENST00000338487 MAPK8IP3Q9UPT6 1336 aa21.22■□□□□ 0.99
DUPD1-201ENST00000338487 AFDNP55196 1824 aaKnown RBP21.21■□□□□ 0.99
DUPD1-201ENST00000338487 A0A0G2JLW4 131 aa21.21■□□□□ 0.99
DUPD1-201ENST00000338487 PRKRIP1Q9H875 184 aaPredicted RBP21.21■□□□□ 0.99
DUPD1-201ENST00000338487 NARFQ9UHQ1 456 aa21.21■□□□□ 0.99
DUPD1-201ENST00000338487 PXDNLA1KZ92 1463 aa21.2■□□□□ 0.98
DUPD1-201ENST00000338487 EIF5P55010 431 aaKnown RBP21.2■□□□□ 0.98
DUPD1-201ENST00000338487 TAF7Q15545 349 aaPredicted RBP21.2■□□□□ 0.98
DUPD1-201ENST00000338487 TBC1D2BQ9UPU7 963 aa21.2■□□□□ 0.98
DUPD1-201ENST00000338487 RRP7AQ9Y3A4 280 aaKnown RBP21.2■□□□□ 0.98
DUPD1-201ENST00000338487 KDM3BQ7LBC6 1761 aa21.2■□□□□ 0.98
DUPD1-201ENST00000338487 C10orf71Q711Q0 1435 aa21.2■□□□□ 0.98
DUPD1-201ENST00000338487 TM4SF1P30408 202 aa21.19■□□□□ 0.98
DUPD1-201ENST00000338487 POLRMTO00411 1230 aaKnown RBP21.18■□□□□ 0.98
DUPD1-201ENST00000338487 DPEP1P16444 411 aa21.18■□□□□ 0.98
DUPD1-201ENST00000338487 NFIXQ14938 502 aa21.18■□□□□ 0.98
DUPD1-201ENST00000338487 BICDL1Q6ZP65 573 aa21.18■□□□□ 0.98
DUPD1-201ENST00000338487 TEX13AQ9BXU3 409 aaPredicted RBP21.18■□□□□ 0.98
DUPD1-201ENST00000338487 SNRPA1P09661 255 aaKnown RBP21.16■□□□□ 0.98
DUPD1-201ENST00000338487 RIPK4P57078 832 aa21.16■□□□□ 0.98
DUPD1-201ENST00000338487 NEUROD2Q15784 382 aa21.16■□□□□ 0.98
DUPD1-201ENST00000338487 PNNQ9H307 717 aaKnown RBP21.16■□□□□ 0.98
DUPD1-201ENST00000338487 BRCA1P38398 1863 aaKnown RBP21.15■□□□□ 0.98
DUPD1-201ENST00000338487 GRIN3BO60391 1043 aa21.15■□□□□ 0.98
DUPD1-201ENST00000338487 ZNF784Q8NCA9 323 aaPredicted RBP21.15■□□□□ 0.98
DUPD1-201ENST00000338487 ADAMTS8Q9UP79 889 aa21.15■□□□□ 0.98
DUPD1-201ENST00000338487 SCN7AQ01118 1682 aa21.15■□□□□ 0.98
DUPD1-201ENST00000338487 CHRNA5P30532 468 aa21.14■□□□□ 0.97
DUPD1-201ENST00000338487 IL6STP40189 918 aaPredicted RBP21.14■□□□□ 0.97
DUPD1-201ENST00000338487 TMPOP42166 694 aaKnown RBP21.14■□□□□ 0.97
DUPD1-201ENST00000338487 NBPF26B4DH59 902 aa21.13■□□□□ 0.97
DUPD1-201ENST00000338487 WDR43Q15061 677 aaKnown RBP eCLIP21.13■□□□□ 0.97
DUPD1-201ENST00000338487 TBC1D9BQ66K14 1250 aa21.13■□□□□ 0.97
DUPD1-201ENST00000338487 NBPF10Q6P3W6 841 aaKnown RBP21.13■□□□□ 0.97
DUPD1-201ENST00000338487 NBPF15Q8N660 670 aa21.13■□□□□ 0.97
DUPD1-201ENST00000338487 LAMB4A4D0S4 1761 aa21.13■□□□□ 0.97
DUPD1-201ENST00000338487 A0A087WZG4 1122 aa21.12■□□□□ 0.97
DUPD1-201ENST00000338487 KCNA3P22001 575 aa21.12■□□□□ 0.97
DUPD1-201ENST00000338487 TGFB2P61812 414 aa21.12■□□□□ 0.97
DUPD1-201ENST00000338487 CCDC184Q52MB2 194 aa21.12■□□□□ 0.97
DUPD1-201ENST00000338487 CCDC24Q8N4L8 307 aa21.12■□□□□ 0.97
DUPD1-201ENST00000338487 BCS1LQ9Y276 419 aa21.12■□□□□ 0.97
DUPD1-201ENST00000338487 NRXN2Q9P2S2 1712 aa21.12■□□□□ 0.97
DUPD1-201ENST00000338487 BCORQ6W2J9 1755 aa21.11■□□□□ 0.97
DUPD1-201ENST00000338487 SERPINB2P05120 415 aa21.11■□□□□ 0.97
DUPD1-201ENST00000338487 EIF4A1P60842 406 aaKnown RBP21.11■□□□□ 0.97
DUPD1-201ENST00000338487 CARMIL3Q8ND23 1372 aa21.1■□□□□ 0.97
DUPD1-201ENST00000338487 ZNF316A6NFI3 1004 aaPredicted RBP21.1■□□□□ 0.97
DUPD1-201ENST00000338487 CAMTA2O94983 1202 aa21.1■□□□□ 0.97
DUPD1-201ENST00000338487 DZIP3Q86Y13 1208 aaKnown RBP21.09■□□□□ 0.97
DUPD1-201ENST00000338487 PNISRQ8TF01 805 aaKnown RBP21.09■□□□□ 0.97
DUPD1-201ENST00000338487 GIGYF1O75420 1035 aaPredicted RBP21.08■□□□□ 0.97
DUPD1-201ENST00000338487 NGEFQ8N5V2 710 aa21.08■□□□□ 0.97
DUPD1-201ENST00000338487 ANKRD31Q8N7Z5 1873 aa21.08■□□□□ 0.97
DUPD1-201ENST00000338487 RUNDC1Q96C34 613 aa21.08■□□□□ 0.97
DUPD1-201ENST00000338487 SENP3-EIF4A1A0A087X0R7 540 aa21.07■□□□□ 0.96
DUPD1-201ENST00000338487 NPM2Q86SE8 214 aaKnown RBP21.07■□□□□ 0.96
DUPD1-201ENST00000338487 TSPYL4Q9UJ04 414 aa21.07■□□□□ 0.96
DUPD1-201ENST00000338487 TRIM35Q9UPQ4 493 aa21.07■□□□□ 0.96
DUPD1-201ENST00000338487 ARFGEF1Q9Y6D6 1849 aa21.05■□□□□ 0.96
DUPD1-201ENST00000338487 ARHGAP27Q6ZUM4 889 aa21.04■□□□□ 0.96
DUPD1-201ENST00000338487 PIM2Q9P1W9 311 aa21.04■□□□□ 0.96
DUPD1-201ENST00000338487 LAS1LQ9Y4W2 734 aaKnown RBP21.04■□□□□ 0.96
DUPD1-201ENST00000338487 MYL6BP14649 208 aa21.03■□□□□ 0.96
DUPD1-201ENST00000338487 HLFQ16534 295 aa21.03■□□□□ 0.96
DUPD1-201ENST00000338487 KRT24Q2M2I5 525 aa21.03■□□□□ 0.96
DUPD1-201ENST00000338487 DLEC1Q9Y238 1755 aa21.02■□□□□ 0.96
DUPD1-201ENST00000338487 DALRD3Q5D0E6 543 aaKnown RBP21.02■□□□□ 0.96
DUPD1-201ENST00000338487 PRR5LQ6MZQ0 368 aa21.02■□□□□ 0.96
DUPD1-201ENST00000338487 C2CD5Q86YS7 1000 aa21.02■□□□□ 0.96
DUPD1-201ENST00000338487 COL11A2P13942 1736 aaPredicted RBP21.01■□□□□ 0.95
DUPD1-201ENST00000338487 APAF1O14727 1248 aa21.01■□□□□ 0.95
DUPD1-201ENST00000338487 EIF2S2P20042 333 aaKnown RBP21.01■□□□□ 0.95
DUPD1-201ENST00000338487 LMOD3Q0VAK6 560 aa21.01■□□□□ 0.95
DUPD1-201ENST00000338487 TTLL7Q6ZT98 887 aa21.01■□□□□ 0.95
DUPD1-201ENST00000338487 ZNF526Q8TF50 670 aaPredicted RBP21.01■□□□□ 0.95
DUPD1-201ENST00000338487 NECTIN2Q92692 538 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms