RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 PARP3Q9Y6F1 533 aa22.95■■□□□ 1.26
VSTM1-201ENST00000338372 USPL1Q5W0Q7 1092 aa22.94■■□□□ 1.26
VSTM1-201ENST00000338372 ZNF496Q96IT1 587 aaPredicted RBP22.94■■□□□ 1.26
VSTM1-201ENST00000338372 PRKAR2BP31323 418 aa22.93■■□□□ 1.26
VSTM1-201ENST00000338372 ZNF790Q6PG37 636 aa22.93■■□□□ 1.26
VSTM1-201ENST00000338372 NARFQ9UHQ1 456 aa22.93■■□□□ 1.26
VSTM1-201ENST00000338372 COL15A1P39059 1388 aa22.92■■□□□ 1.26
VSTM1-201ENST00000338372 HEG1Q9ULI3 1381 aa22.91■■□□□ 1.26
VSTM1-201ENST00000338372 EIF5P55010 431 aaKnown RBP22.91■■□□□ 1.26
VSTM1-201ENST00000338372 KCNQ3O43525 872 aa22.9■■□□□ 1.26
VSTM1-201ENST00000338372 GIGYF1O75420 1035 aaPredicted RBP22.89■■□□□ 1.25
VSTM1-201ENST00000338372 NFIXQ14938 502 aa22.89■■□□□ 1.25
VSTM1-201ENST00000338372 CFAP53Q96M91 514 aa22.89■■□□□ 1.25
VSTM1-201ENST00000338372 FCHSD2O94868 740 aa22.88■■□□□ 1.25
VSTM1-201ENST00000338372 BCS1LQ9Y276 419 aa22.88■■□□□ 1.25
VSTM1-201ENST00000338372 DLG5Q8TDM6 1919 aa22.88■■□□□ 1.25
VSTM1-201ENST00000338372 SBF1O95248 1867 aa22.88■■□□□ 1.25
VSTM1-201ENST00000338372 DLEC1Q9Y238 1755 aa22.87■■□□□ 1.25
VSTM1-201ENST00000338372 ZPR1O75312 459 aa22.87■■□□□ 1.25
VSTM1-201ENST00000338372 TEFQ10587 303 aa22.87■■□□□ 1.25
VSTM1-201ENST00000338372 SCN7AQ01118 1682 aa22.85■■□□□ 1.25
VSTM1-201ENST00000338372 U2AF1L5P0DN76 240 aaPredicted RBP22.85■■□□□ 1.25
VSTM1-201ENST00000338372 CANXP27824 592 aaKnown RBP22.85■■□□□ 1.25
VSTM1-201ENST00000338372 U2AF1Q01081 240 aaKnown RBP eCLIP22.85■■□□□ 1.25
VSTM1-201ENST00000338372 TTC5Q8N0Z6 440 aa22.85■■□□□ 1.25
VSTM1-201ENST00000338372 NUDCQ9Y266 331 aa22.85■■□□□ 1.25
VSTM1-201ENST00000338372 ANKRD31Q8N7Z5 1873 aa22.85■■□□□ 1.25
VSTM1-201ENST00000338372 STARD3NLO95772 234 aa22.84■■□□□ 1.25
VSTM1-201ENST00000338372 CHRNA5P30532 468 aa22.84■■□□□ 1.25
VSTM1-201ENST00000338372 TEX13AQ9BXU3 409 aaPredicted RBP22.83■■□□□ 1.25
VSTM1-201ENST00000338372 PIM2Q9P1W9 311 aa22.83■■□□□ 1.25
VSTM1-201ENST00000338372 A1BGP04217 495 aa22.82■■□□□ 1.24
VSTM1-201ENST00000338372 MCM10Q7L590 875 aa22.82■■□□□ 1.24
VSTM1-201ENST00000338372 FMNL2Q96PY5 1086 aa22.82■■□□□ 1.24
VSTM1-201ENST00000338372 BCORQ6W2J9 1755 aa22.81■■□□□ 1.24
VSTM1-201ENST00000338372 PRAMEF22A3QJZ6 481 aa22.81■■□□□ 1.24
VSTM1-201ENST00000338372 BTBD11A6QL63 1104 aa22.81■■□□□ 1.24
VSTM1-201ENST00000338372 KIF3CO14782 793 aa22.81■■□□□ 1.24
VSTM1-201ENST00000338372 SERPINB2P05120 415 aa22.81■■□□□ 1.24
VSTM1-201ENST00000338372 GPBP1L1Q9HC44 474 aaPredicted RBP22.81■■□□□ 1.24
VSTM1-201ENST00000338372 USP16Q9Y5T5 823 aa22.81■■□□□ 1.24
VSTM1-201ENST00000338372 CEP350Q5VT06 3117 aa22.81■■□□□ 1.24
VSTM1-201ENST00000338372 CARMIL3Q8ND23 1372 aa22.8■■□□□ 1.24
VSTM1-201ENST00000338372 IL6STP40189 918 aaPredicted RBP22.8■■□□□ 1.24
VSTM1-201ENST00000338372 DCTN1Q14203 1278 aa22.8■■□□□ 1.24
VSTM1-201ENST00000338372 ARHGAP27Q6ZUM4 889 aa22.8■■□□□ 1.24
VSTM1-201ENST00000338372 PLEKHF1Q96S99 279 aa22.8■■□□□ 1.24
VSTM1-201ENST00000338372 HTATSF1O43719 755 aaKnown RBP22.79■■□□□ 1.24
VSTM1-201ENST00000338372 SENP3-EIF4A1A0A087X0R7 540 aa22.78■■□□□ 1.24
VSTM1-201ENST00000338372 DALRD3Q5D0E6 543 aaKnown RBP22.78■■□□□ 1.24
VSTM1-201ENST00000338372 TBC1D9BQ66K14 1250 aa22.78■■□□□ 1.24
VSTM1-201ENST00000338372 ZNF526Q8TF50 670 aaPredicted RBP22.78■■□□□ 1.24
VSTM1-201ENST00000338372 KDM3BQ7LBC6 1761 aa22.77■■□□□ 1.24
VSTM1-201ENST00000338372 A0A087WZG4 1122 aa22.77■■□□□ 1.24
VSTM1-201ENST00000338372 CAMTA2O94983 1202 aa22.77■■□□□ 1.24
VSTM1-201ENST00000338372 TBC1D2BQ9UPU7 963 aa22.77■■□□□ 1.24
VSTM1-201ENST00000338372 COL11A2P13942 1736 aaPredicted RBP22.75■■□□□ 1.23
VSTM1-201ENST00000338372 CCDC88AQ3V6T2 1871 aa22.75■■□□□ 1.23
VSTM1-201ENST00000338372 PRELPP51888 382 aa22.74■■□□□ 1.23
VSTM1-201ENST00000338372 NBPF26B4DH59 902 aa22.73■■□□□ 1.23
VSTM1-201ENST00000338372 PIP4K2AP48426 406 aaPredicted RBP22.73■■□□□ 1.23
VSTM1-201ENST00000338372 C9orf131Q5VYM1 1079 aa22.73■■□□□ 1.23
VSTM1-201ENST00000338372 NBPF10Q6P3W6 841 aaKnown RBP22.73■■□□□ 1.23
VSTM1-201ENST00000338372 NBPF15Q8N660 670 aa22.73■■□□□ 1.23
VSTM1-201ENST00000338372 SNRPA1P09661 255 aaKnown RBP22.72■■□□□ 1.23
VSTM1-201ENST00000338372 BICDL1Q6ZP65 573 aa22.72■■□□□ 1.23
VSTM1-201ENST00000338372 LAMB4A4D0S4 1761 aa22.71■■□□□ 1.23
VSTM1-201ENST00000338372 TAF7Q15545 349 aaPredicted RBP22.71■■□□□ 1.23
VSTM1-201ENST00000338372 PRR5LQ6MZQ0 368 aa22.71■■□□□ 1.23
VSTM1-201ENST00000338372 RTF1Q92541 710 aaKnown RBP22.71■■□□□ 1.23
VSTM1-201ENST00000338372 MIS18AQ9NYP9 233 aa22.7■■□□□ 1.22
VSTM1-201ENST00000338372 FER1L6Q2WGJ9 1857 aa22.68■■□□□ 1.22
VSTM1-201ENST00000338372 DZIP3Q86Y13 1208 aaKnown RBP22.68■■□□□ 1.22
VSTM1-201ENST00000338372 C2CD5Q86YS7 1000 aa22.68■■□□□ 1.22
VSTM1-201ENST00000338372 BRIP1Q9BX63 1249 aa22.68■■□□□ 1.22
VSTM1-201ENST00000338372 NMRK2Q9NPI5 230 aa22.68■■□□□ 1.22
VSTM1-201ENST00000338372 NFE2L2Q16236 605 aa22.67■■□□□ 1.22
VSTM1-201ENST00000338372 CCDC24Q8N4L8 307 aa22.67■■□□□ 1.22
VSTM1-201ENST00000338372 TTLL6Q8N841 843 aa22.67■■□□□ 1.22
VSTM1-201ENST00000338372 ZNF330Q9Y3S2 320 aaPredicted RBP22.67■■□□□ 1.22
VSTM1-201ENST00000338372 SLX4Q8IY92 1834 aa22.66■■□□□ 1.22
VSTM1-201ENST00000338372 ARFGEF2Q9Y6D5 1785 aa22.66■■□□□ 1.22
VSTM1-201ENST00000338372 DICER1Q9UPY3 1922 aaKnown RBP22.65■■□□□ 1.22
VSTM1-201ENST00000338372 H0YIN7 160 aa22.65■■□□□ 1.22
VSTM1-201ENST00000338372 HSPA6P17066 643 aa22.65■■□□□ 1.22
VSTM1-201ENST00000338372 RASSF7Q02833 373 aa22.65■■□□□ 1.22
VSTM1-201ENST00000338372 CLEC4GQ6UXB4 293 aa22.65■■□□□ 1.22
VSTM1-201ENST00000338372 THUMPD2Q9BTF0 503 aaKnown RBP22.65■■□□□ 1.22
VSTM1-201ENST00000338372 NUP98P52948 1817 aa22.64■■□□□ 1.22
VSTM1-201ENST00000338372 NFKBIEO00221 500 aa22.64■■□□□ 1.21
VSTM1-201ENST00000338372 EIF4A1P60842 406 aaKnown RBP22.64■■□□□ 1.21
VSTM1-201ENST00000338372 SETDB2Q96T68 719 aa22.64■■□□□ 1.21
VSTM1-201ENST00000338372 RNF181Q9P0P0 153 aa22.64■■□□□ 1.21
VSTM1-201ENST00000338372 CACNA1SQ13698 1873 aa22.64■■□□□ 1.21
VSTM1-201ENST00000338372 RGL2O15211 777 aa22.63■■□□□ 1.21
VSTM1-201ENST00000338372 RALBP1Q15311 655 aa22.63■■□□□ 1.21
VSTM1-201ENST00000338372 PDZRN3Q9UPQ7 1066 aa22.62■■□□□ 1.21
VSTM1-201ENST00000338372 KLRG2A4D1S0 409 aaPredicted RBP22.61■■□□□ 1.21
VSTM1-201ENST00000338372 TOMM70O94826 608 aa22.61■■□□□ 1.21
VSTM1-201ENST00000338372 PDE6BP35913 854 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms