RNA–Protein interactions for RNA: ENST00000338179.6

LBR-202, Transcript of lamin B receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LBR, Length 3,812 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-202ENST00000338179 MED1Q15648 1581 aaPredicted RBP4.87□□□□□ -1.63
LBR-202ENST00000338179 RBM47A0AV96 593 aaKnown RBP4.87□□□□□ -1.63
LBR-202ENST00000338179 GALR2O43603 387 aaPredicted RBP4.87□□□□□ -1.63
LBR-202ENST00000338179 PPP2R2DQ66LE6 453 aa4.87□□□□□ -1.63
LBR-202ENST00000338179 SREK1Q8WXA9 508 aaKnown RBP4.87□□□□□ -1.63
LBR-202ENST00000338179 ADAMTS7Q9UKP4 1686 aa4.87□□□□□ -1.63
LBR-202ENST00000338179 IL16Q14005 1332 aa4.87□□□□□ -1.63
LBR-202ENST00000338179 CPS1P31327 1500 aa4.87□□□□□ -1.63
LBR-202ENST00000338179 CEP170BQ9Y4F5 1589 aaPredicted RBP4.87□□□□□ -1.63
LBR-202ENST00000338179 OATP04181 439 aa4.87□□□□□ -1.63
LBR-202ENST00000338179 EXOC6Q8TAG9 804 aa4.87□□□□□ -1.63
LBR-202ENST00000338179 KIF16BQ96L93 1317 aa4.87□□□□□ -1.63
LBR-202ENST00000338179 RASA1P20936 1047 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 PPP2R1AP30153 589 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 HELBQ8NG08 1087 aaPredicted RBP4.86□□□□□ -1.63
LBR-202ENST00000338179 PRIMPOLQ96LW4 560 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 PCDHGC3Q9UN70 934 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 SALL2Q9Y467 1007 aaPredicted RBP4.86□□□□□ -1.63
LBR-202ENST00000338179 RPGRIP1LQ68CZ1 1315 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 MAPK8IP3Q9UPT6 1336 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 COL22A1Q8NFW1 1626 aaPredicted RBP4.86□□□□□ -1.63
LBR-202ENST00000338179 PTCH1Q13635 1447 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 TERF1P54274 439 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 CAMTA1Q9Y6Y1 1673 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 XRN1Q8IZH2 1706 aaKnown RBP4.86□□□□□ -1.63
LBR-202ENST00000338179 USP17L3A6NCW0 530 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 USP17L4A6NCW7 530 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 LILRB3O75022 631 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 ERCC5P28715 1186 aaPredicted RBP4.86□□□□□ -1.63
LBR-202ENST00000338179 NCOA4Q13772 614 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 SLFNL1Q499Z3 407 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 USP17L2Q6R6M4 530 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 CAPN12Q6ZSI9 719 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 USP17L1Q7RTZ2 530 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 WDR63Q8IWG1 891 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 CERKQ8TCT0 537 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 DRC1Q96MC2 740 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 CARD11Q9BXL7 1154 aa4.86□□□□□ -1.63
LBR-202ENST00000338179 KIF3CO14782 793 aa4.85□□□□□ -1.63
LBR-202ENST00000338179 GTF2F1P35269 517 aaKnown RBP eCLIP4.85□□□□□ -1.632e-7■□□□□ 9.1
LBR-202ENST00000338179 ALG2Q9H553 416 aa4.85□□□□□ -1.63
LBR-202ENST00000338179 ABCC11Q96J66 1382 aa4.85□□□□□ -1.63
LBR-202ENST00000338179 ATP7BP35670 1465 aa4.85□□□□□ -1.63
LBR-202ENST00000338179 DHX38Q92620 1227 aaKnown RBP4.85□□□□□ -1.63
LBR-202ENST00000338179 CDCA7LQ96GN5 454 aa4.85□□□□□ -1.63
LBR-202ENST00000338179 RNF19AQ9NV58 838 aa4.85□□□□□ -1.63
LBR-202ENST00000338179 FAM208AQ9UK61 1670 aaKnown RBP4.85□□□□□ -1.63
LBR-202ENST00000338179 CFAP99D6REC4 459 aa4.85□□□□□ -1.63
LBR-202ENST00000338179 RECKO95980 971 aa4.85□□□□□ -1.63
LBR-202ENST00000338179 MAPK1P28482 360 aa4.85□□□□□ -1.63
LBR-202ENST00000338179 FAM198AQ9UFP1 575 aa4.85□□□□□ -1.63
LBR-202ENST00000338179 TECPR2O15040 1411 aa4.85□□□□□ -1.63
LBR-202ENST00000338179 SPTLC1O15269 473 aa4.84□□□□□ -1.63
LBR-202ENST00000338179 ATG7O95352 703 aa4.84□□□□□ -1.63
LBR-202ENST00000338179 ATP2B4P23634 1241 aa4.84□□□□□ -1.63
LBR-202ENST00000338179 DNAJA1P31689 397 aaKnown RBP4.84□□□□□ -1.63
LBR-202ENST00000338179 C6orf132Q5T0Z8 1188 aa4.84□□□□□ -1.63
LBR-202ENST00000338179 NUDT18Q6ZVK8 323 aa4.84□□□□□ -1.63
LBR-202ENST00000338179 RBM46Q8TBY0 533 aaKnown RBP4.84□□□□□ -1.63
LBR-202ENST00000338179 PMFBP1Q8TBY8 1022 aa4.84□□□□□ -1.63
LBR-202ENST00000338179 KHSRPQ92945 711 aaKnown RBP eCLIP4.84□□□□□ -1.632e-8■■□□□ 13.7
LBR-202ENST00000338179 SNX21Q969T3 373 aa4.84□□□□□ -1.63
LBR-202ENST00000338179 TANGO6Q9C0B7 1094 aa4.84□□□□□ -1.63
LBR-202ENST00000338179 IGSF5Q9NSI5 407 aa4.84□□□□□ -1.63
LBR-202ENST00000338179 USP17L5A8MUK1 530 aa4.84□□□□□ -1.63
LBR-202ENST00000338179 TMF1P82094 1093 aa4.84□□□□□ -1.63
LBR-202ENST00000338179 HDAC1Q13547 482 aaPredicted RBP4.84□□□□□ -1.63
LBR-202ENST00000338179 WASHC4Q2M389 1173 aa4.84□□□□□ -1.63
LBR-202ENST00000338179 NOL8Q76FK4 1167 aaKnown RBP4.84□□□□□ -1.63
LBR-202ENST00000338179 DDX60Q8IY21 1712 aaKnown RBP4.84□□□□□ -1.63
LBR-202ENST00000338179 A2ML1A8K2U0 1454 aa4.84□□□□□ -1.63
LBR-202ENST00000338179 CPSF1Q10570 1443 aaKnown RBP4.84□□□□□ -1.64
LBR-202ENST00000338179 TBC1D32Q96NH3 1257 aa4.84□□□□□ -1.64
LBR-202ENST00000338179 ZBTB3Q9H5J0 574 aa4.84□□□□□ -1.64
LBR-202ENST00000338179 SEPT3Q9UH03 358 aa4.84□□□□□ -1.64
LBR-202ENST00000338179 MKRN1Q9UHC7 482 aaKnown RBP4.84□□□□□ -1.64
LBR-202ENST00000338179 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.84□□□□□ -1.64
LBR-202ENST00000338179 CD46P15529 392 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 TNNI2P48788 182 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 PSME1Q06323 249 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 DIXDC1Q155Q3 683 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 NFKBIBQ15653 356 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 GLYCTKQ8IVS8 523 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 FAM174AQ8TBP5 190 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 TMC1Q8TDI8 760 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 ALKQ9UM73 1620 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 ANKRD36BQ8N2N9 1353 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 FBXO45P0C2W1 286 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 PTGER2P43116 358 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 FAM9BQ8IZU0 186 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 SIRT1Q96EB6 747 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 NPAS4Q8IUM7 802 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 VTI1AQ96AJ9 217 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 SPATA32Q96LK8 384 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 CHIC2Q9UKJ5 165 aa4.83□□□□□ -1.64
LBR-202ENST00000338179 ADAM33Q9BZ11 813 aa4.82□□□□□ -1.64
LBR-202ENST00000338179 SOWAHDA6NJG2 315 aa4.82□□□□□ -1.64
LBR-202ENST00000338179 NUDT7P0C024 238 aa4.82□□□□□ -1.64
LBR-202ENST00000338179 ATN1P54259 1190 aaPredicted RBP4.82□□□□□ -1.64
LBR-202ENST00000338179 MAP2P11137 1827 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms