RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 TMEM132AQ24JP5 1023 aa9.3□□□□□ -0.92
TNPO1-201ENST00000337273 AACSQ86V21 672 aa9.3□□□□□ -0.92
TNPO1-201ENST00000337273 NFE2L2Q16236 605 aa9.3□□□□□ -0.92
TNPO1-201ENST00000337273 CEP126Q9P2H0 1117 aa9.3□□□□□ -0.92
TNPO1-201ENST00000337273 YEATS4O95619 227 aa9.3□□□□□ -0.92
TNPO1-201ENST00000337273 SPECC1LQ69YQ0 1117 aa9.3□□□□□ -0.92
TNPO1-201ENST00000337273 CWC27Q6UX04 472 aaKnown RBP9.3□□□□□ -0.92
TNPO1-201ENST00000337273 KIF4BQ2VIQ3 1234 aa9.3□□□□□ -0.92
TNPO1-201ENST00000337273 HS1BP3Q53T59 392 aa9.3□□□□□ -0.92
TNPO1-201ENST00000337273 ZSCAN16Q9H4T2 348 aaPredicted RBP9.3□□□□□ -0.92
TNPO1-201ENST00000337273 NSD2O96028 1365 aa9.3□□□□□ -0.92
TNPO1-201ENST00000337273 MX1P20591 662 aa9.3□□□□□ -0.92
TNPO1-201ENST00000337273 IFI16Q16666 785 aaKnown RBP9.3□□□□□ -0.92
TNPO1-201ENST00000337273 CHAMP1Q96JM3 812 aa9.3□□□□□ -0.92
TNPO1-201ENST00000337273 LRPPRCP42704 1394 aaKnown RBP9.3□□□□□ -0.92
TNPO1-201ENST00000337273 CFAP65Q6ZU64 1925 aaKnown RBP9.3□□□□□ -0.92
TNPO1-201ENST00000337273 AMPD3Q01432 767 aa9.3□□□□□ -0.92
TNPO1-201ENST00000337273 USP25Q9UHP3 1055 aa9.3□□□□□ -0.92
TNPO1-201ENST00000337273 CFAP70Q5T0N1 1121 aa9.3□□□□□ -0.92
TNPO1-201ENST00000337273 KSR1Q8IVT5 923 aa9.3□□□□□ -0.92
TNPO1-201ENST00000337273 ALS2CR12Q96Q35 445 aa9.3□□□□□ -0.92
TNPO1-201ENST00000337273 LIMCH1Q9UPQ0 1083 aa9.29□□□□□ -0.92
TNPO1-201ENST00000337273 UBE2HP62256 183 aa9.29□□□□□ -0.92
TNPO1-201ENST00000337273 TTC16Q8NEE8 873 aa9.29□□□□□ -0.92
TNPO1-201ENST00000337273 MAP3K1Q13233 1512 aa9.29□□□□□ -0.92
TNPO1-201ENST00000337273 GOLIM4O00461 696 aa9.29□□□□□ -0.92
TNPO1-201ENST00000337273 TUBBP07437 444 aa9.29□□□□□ -0.92
TNPO1-201ENST00000337273 URI1O94763 535 aaPredicted RBP9.29□□□□□ -0.92
TNPO1-201ENST00000337273 BMP2KLQ5H9B9 411 aa9.29□□□□□ -0.92
TNPO1-201ENST00000337273 RNF187Q5TA31 235 aaPredicted RBP9.29□□□□□ -0.92
TNPO1-201ENST00000337273 CCDC85AQ96PX6 553 aaPredicted RBP9.29□□□□□ -0.92
TNPO1-201ENST00000337273 JARID2Q92833 1246 aaPredicted RBP9.29□□□□□ -0.92
TNPO1-201ENST00000337273 TNNQ9UQP3 1299 aa9.29□□□□□ -0.92
TNPO1-201ENST00000337273 CFTRP13569 1480 aa9.29□□□□□ -0.92
TNPO1-201ENST00000337273 CACNA2D4Q7Z3S7 1137 aa9.29□□□□□ -0.92
TNPO1-201ENST00000337273 FAM114A1Q8IWE2 563 aa9.29□□□□□ -0.92
TNPO1-201ENST00000337273 LRRC27Q9C0I9 530 aa9.28□□□□□ -0.92
TNPO1-201ENST00000337273 RTEL1-TNFRSF6BF6WH68 1400 aa9.28□□□□□ -0.92
TNPO1-201ENST00000337273 CLCN1P35523 988 aa9.28□□□□□ -0.92
TNPO1-201ENST00000337273 MPHOSPH8Q99549 860 aa9.28□□□□□ -0.92
TNPO1-201ENST00000337273 BIN1O00499 593 aa9.28□□□□□ -0.92
TNPO1-201ENST00000337273 STX1AQ16623 288 aa9.28□□□□□ -0.92
TNPO1-201ENST00000337273 SULT6B1Q6IMI4 303 aa9.28□□□□□ -0.92
TNPO1-201ENST00000337273 ARAP1Q96P48 1450 aa9.28□□□□□ -0.92
TNPO1-201ENST00000337273 SMARCC1Q92922 1105 aaPredicted RBP9.28□□□□□ -0.92
TNPO1-201ENST00000337273 RNF41Q9H4P4 317 aaPredicted RBP9.28□□□□□ -0.92
TNPO1-201ENST00000337273 TROQ12816 1431 aaPredicted RBP9.28□□□□□ -0.92
TNPO1-201ENST00000337273 CABP4P57796 275 aa9.28□□□□□ -0.92
TNPO1-201ENST00000337273 TNIP1Q15025 636 aa9.28□□□□□ -0.92
TNPO1-201ENST00000337273 CTAGE1Q96RT6 745 aa9.28□□□□□ -0.92
TNPO1-201ENST00000337273 GNAT3A8MTJ3 354 aa9.28□□□□□ -0.92
TNPO1-201ENST00000337273 TDO2P48775 406 aa9.28□□□□□ -0.92
TNPO1-201ENST00000337273 DNAAF4Q8WXU2 420 aa9.28□□□□□ -0.92
TNPO1-201ENST00000337273 ANKRD18BA2A2Z9 1011 aa9.27□□□□□ -0.92
TNPO1-201ENST00000337273 HMG20BQ9P0W2 317 aa9.27□□□□□ -0.92
TNPO1-201ENST00000337273 CCDC175P0C221 793 aa9.27□□□□□ -0.93
TNPO1-201ENST00000337273 CKAP4Q07065 602 aaKnown RBP9.27□□□□□ -0.93
TNPO1-201ENST00000337273 NUP133Q8WUM0 1156 aa9.27□□□□□ -0.93
TNPO1-201ENST00000337273 AIDAQ96BJ3 306 aa9.27□□□□□ -0.93
TNPO1-201ENST00000337273 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.27□□□□□ -0.93
TNPO1-201ENST00000337273 TMPOP42166 694 aaKnown RBP9.27□□□□□ -0.93
TNPO1-201ENST00000337273 NBPF1Q3BBV0 1214 aa9.27□□□□□ -0.93
TNPO1-201ENST00000337273 PRAM1Q96QH2 718 aa9.27□□□□□ -0.93
TNPO1-201ENST00000337273 NUTM1Q86Y26 1132 aa9.27□□□□□ -0.93
TNPO1-201ENST00000337273 TNPO1Q92973 898 aaKnown RBP9.27□□□□□ -0.93
TNPO1-201ENST00000337273 GTF3C6Q969F1 213 aa9.27□□□□□ -0.93
TNPO1-201ENST00000337273 C8orf76Q96K31 380 aa9.27□□□□□ -0.93
TNPO1-201ENST00000337273 IFFO1Q0D2I5 559 aa9.27□□□□□ -0.93
TNPO1-201ENST00000337273 CDK19Q9BWU1 502 aa9.27□□□□□ -0.93
TNPO1-201ENST00000337273 NCAPD3P42695 1498 aa9.27□□□□□ -0.93
TNPO1-201ENST00000337273 C6orf163Q5TEZ5 329 aa9.27□□□□□ -0.93
TNPO1-201ENST00000337273 SPATA24Q86W54 205 aa9.27□□□□□ -0.93
TNPO1-201ENST00000337273 KCNH5Q8NCM2 988 aa9.27□□□□□ -0.93
TNPO1-201ENST00000337273 EVI5LQ96CN4 794 aa9.27□□□□□ -0.93
TNPO1-201ENST00000337273 BTBD11A6QL63 1104 aa9.26□□□□□ -0.93
TNPO1-201ENST00000337273 CCDC172P0C7W6 258 aa9.26□□□□□ -0.93
TNPO1-201ENST00000337273 FAM160A1Q05DH4 1040 aa9.26□□□□□ -0.93
TNPO1-201ENST00000337273 CETN1Q12798 172 aa9.26□□□□□ -0.93
TNPO1-201ENST00000337273 FKBP4Q02790 459 aaKnown RBP eCLIP9.26□□□□□ -0.93
TNPO1-201ENST00000337273 TMEM266Q2M3C6 531 aa9.26□□□□□ -0.93
TNPO1-201ENST00000337273 LRSAM1Q6UWE0 723 aa9.26□□□□□ -0.93
TNPO1-201ENST00000337273 TMEM57Q8N5G2 664 aa9.26□□□□□ -0.93
TNPO1-201ENST00000337273 CNNM3Q8NE01 707 aa9.26□□□□□ -0.93
TNPO1-201ENST00000337273 RARSP54136 660 aaKnown RBP9.26□□□□□ -0.93
TNPO1-201ENST00000337273 GUCY1B3Q02153 619 aa9.26□□□□□ -0.93
TNPO1-201ENST00000337273 TMEM132EQ6IEE7 984 aa9.26□□□□□ -0.93
TNPO1-201ENST00000337273 PRXQ9BXM0 1461 aa9.26□□□□□ -0.93
TNPO1-201ENST00000337273 DNAJC21Q5F1R6 531 aaKnown RBP9.26□□□□□ -0.93
TNPO1-201ENST00000337273 LARP1Q6PKG0 1096 aaKnown RBP9.26□□□□□ -0.93
TNPO1-201ENST00000337273 TIGD1Q96MW7 591 aa9.26□□□□□ -0.93
TNPO1-201ENST00000337273 SEC63Q9UGP8 760 aaKnown RBP9.26□□□□□ -0.93
TNPO1-201ENST00000337273 CCDC12Q8WUD4 166 aaPredicted RBP9.26□□□□□ -0.93
TNPO1-201ENST00000337273 PLVAPQ9BX97 442 aa9.26□□□□□ -0.93
TNPO1-201ENST00000337273 GTPBP4Q9BZE4 634 aaKnown RBP9.26□□□□□ -0.93
TNPO1-201ENST00000337273 IL16Q14005 1332 aa9.26□□□□□ -0.93
TNPO1-201ENST00000337273 BMP15O95972 392 aa9.26□□□□□ -0.93
TNPO1-201ENST00000337273 LONRF3Q496Y0 759 aa9.26□□□□□ -0.93
TNPO1-201ENST00000337273 OSCARQ8IYS5 282 aa9.26□□□□□ -0.93
TNPO1-201ENST00000337273 RBM42Q9BTD8 480 aaKnown RBP9.26□□□□□ -0.93
TNPO1-201ENST00000337273 TBC1D2Q9BYX2 928 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms